RNA–Protein interactions for RNA: ENST00000597180.1

IRF3-216, Transcript of interferon regulatory factor 3, humanhuman

TSL 5

Gene IRF3, Length 301 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-216ENST00000597180 CNTN3Q9P232 1028 aa19.77■□□□□ 0.76
IRF3-216ENST00000597180 FAN1Q9Y2M0 1017 aa19.77■□□□□ 0.76
IRF3-216ENST00000597180 NRP1O14786 923 aa19.76■□□□□ 0.75
IRF3-216ENST00000597180 PRR29P0C7W0 189 aa19.76■□□□□ 0.75
IRF3-216ENST00000597180 HOXD13P35453 343 aa19.76■□□□□ 0.75
IRF3-216ENST00000597180 DPYDQ12882 1025 aa19.76■□□□□ 0.75
IRF3-216ENST00000597180 POSTNQ15063 836 aa19.76■□□□□ 0.75
IRF3-216ENST00000597180 SLC10A6Q3KNW5 377 aa19.76■□□□□ 0.75
IRF3-216ENST00000597180 SEZ6Q53EL9 994 aa19.76■□□□□ 0.75
IRF3-216ENST00000597180 MICALL1Q8N3F8 863 aa19.76■□□□□ 0.75
IRF3-216ENST00000597180 ZNF507Q8TCN5 953 aa19.76■□□□□ 0.75
IRF3-216ENST00000597180 NSUN3Q9H649 340 aaKnown RBP19.76■□□□□ 0.75
IRF3-216ENST00000597180 TLR9Q9NR96 1032 aa19.76■□□□□ 0.75
IRF3-216ENST00000597180 MARCH5Q9NX47 278 aa19.76■□□□□ 0.75
IRF3-216ENST00000597180 PUF60Q9UHX1 559 aaKnown RBP19.76■□□□□ 0.75
IRF3-216ENST00000597180 REV3LO60673 3130 aa19.76■□□□□ 0.75
IRF3-216ENST00000597180 SMIM28A0A1B0GU29 152 aa19.75■□□□□ 0.75
IRF3-216ENST00000597180 FSCN2O14926 492 aa19.75■□□□□ 0.75
IRF3-216ENST00000597180 NR1I2O75469 434 aa19.75■□□□□ 0.75
IRF3-216ENST00000597180 RPN1P04843 607 aaKnown RBP19.75■□□□□ 0.75
IRF3-216ENST00000597180 KCNE1P15382 129 aa19.75■□□□□ 0.75
IRF3-216ENST00000597180 ADSSP30520 456 aa19.75■□□□□ 0.75
IRF3-216ENST00000597180 TNFSF9P41273 254 aa19.75■□□□□ 0.75
IRF3-216ENST00000597180 PSMD2Q13200 908 aa19.75■□□□□ 0.75
IRF3-216ENST00000597180 CCDC85BQ15834 202 aaPredicted RBP19.75■□□□□ 0.75
IRF3-216ENST00000597180 BMT2Q1RMZ1 405 aa19.75■□□□□ 0.75
IRF3-216ENST00000597180 KMT5BQ4FZB7 885 aa19.75■□□□□ 0.75
IRF3-216ENST00000597180 GLRA4Q5JXX5 417 aa19.75■□□□□ 0.75
IRF3-216ENST00000597180 ZBTB41Q5SVQ8 909 aa19.75■□□□□ 0.75
IRF3-216ENST00000597180 PDE12Q6L8Q7 609 aaKnown RBP19.75■□□□□ 0.75
IRF3-216ENST00000597180 DDX53Q86TM3 631 aaKnown RBP19.75■□□□□ 0.75
IRF3-216ENST00000597180 SYCP3Q8IZU3 236 aa19.75■□□□□ 0.75
IRF3-216ENST00000597180 CCDC34Q96HJ3 373 aa19.75■□□□□ 0.75
IRF3-216ENST00000597180 TIGD1Q96MW7 591 aa19.75■□□□□ 0.75
IRF3-216ENST00000597180 PLEKHA5Q9HAU0 1116 aa19.75■□□□□ 0.75
IRF3-216ENST00000597180 EXOC1Q9NV70 894 aa19.75■□□□□ 0.75
IRF3-216ENST00000597180 CPSF3Q9UKF6 684 aaKnown RBP19.75■□□□□ 0.75
IRF3-216ENST00000597180 AGO2Q9UKV8 859 aaKnown RBP19.75■□□□□ 0.75
IRF3-216ENST00000597180 EYSQ5T1H1 3165 aa19.75■□□□□ 0.75
IRF3-216ENST00000597180 TTC26A0AVF1 554 aa19.74■□□□□ 0.75
IRF3-216ENST00000597180 GADD45BO75293 160 aaPredicted RBP19.74■□□□□ 0.75
IRF3-216ENST00000597180 EFEMP2O95967 443 aa19.74■□□□□ 0.75
IRF3-216ENST00000597180 ADRB2P07550 413 aa19.74■□□□□ 0.75
IRF3-216ENST00000597180 CXCL8P10145 99 aa19.74■□□□□ 0.75
IRF3-216ENST00000597180 GARTP22102 1010 aa19.74■□□□□ 0.75
IRF3-216ENST00000597180 IRS1P35568 1242 aa19.74■□□□□ 0.75
IRF3-216ENST00000597180 OR1G1P47890 313 aa19.74■□□□□ 0.75
IRF3-216ENST00000597180 ERVFC1P60507 584 aa19.74■□□□□ 0.75
IRF3-216ENST00000597180 POU5F1Q01860 360 aaKnown RBP19.74■□□□□ 0.75
IRF3-216ENST00000597180 ENOX2Q16206 610 aaKnown RBP19.74■□□□□ 0.75
IRF3-216ENST00000597180 CLEC17AQ6ZS10 378 aa19.74■□□□□ 0.75
IRF3-216ENST00000597180 SCFD1Q8WVM8 642 aa19.74■□□□□ 0.75
IRF3-216ENST00000597180 POMGNT1Q8WZA1 660 aa19.74■□□□□ 0.75
IRF3-216ENST00000597180 ZMAT2Q96NC0 199 aaKnown RBP19.74■□□□□ 0.75
IRF3-216ENST00000597180 COLEC11Q9BWP8 271 aa19.74■□□□□ 0.75
IRF3-216ENST00000597180 VN1R3Q9BXE9 311 aa19.74■□□□□ 0.75
IRF3-216ENST00000597180 SLC39A2Q9NP94 309 aa19.74■□□□□ 0.75
IRF3-216ENST00000597180 STK39Q9UEW8 545 aa19.74■□□□□ 0.75
IRF3-216ENST00000597180 PRG3Q9Y2Y8 225 aaPredicted RBP19.74■□□□□ 0.75
IRF3-216ENST00000597180 BRWD1Q9NSI6 2320 aa19.74■□□□□ 0.75
IRF3-216ENST00000597180 TCEAL5Q5H9L2 206 aa19.73■□□□□ 0.75
IRF3-216ENST00000597180 KIAA0895Q8NCT3 520 aa19.73■□□□□ 0.75
IRF3-216ENST00000597180 PPM1EQ8WY54 764 aa19.73■□□□□ 0.75
IRF3-216ENST00000597180 ZBP1Q9H171 429 aa19.73■□□□□ 0.75
IRF3-216ENST00000597180 RPF1Q9H9Y2 349 aaKnown RBP19.73■□□□□ 0.75
IRF3-216ENST00000597180 NGRNQ9NPE2 291 aaKnown RBP19.73■□□□□ 0.75
IRF3-216ENST00000597180 SLC38A7Q9NVC3 462 aa19.73■□□□□ 0.75
IRF3-216ENST00000597180 VWA8A3KMH1 1905 aa19.72■□□□□ 0.75
IRF3-216ENST00000597180 CASTOR2A6NHX0 329 aa19.72■□□□□ 0.75
IRF3-216ENST00000597180 RHOBTB3O94955 611 aa19.72■□□□□ 0.75
IRF3-216ENST00000597180 PPP2R3AQ06190 1150 aa19.72■□□□□ 0.75
IRF3-216ENST00000597180 STK4Q13043 487 aa19.72■□□□□ 0.75
IRF3-216ENST00000597180 HSP90AA2PQ14568 343 aaPredicted RBP19.72■□□□□ 0.75
IRF3-216ENST00000597180 KCNB1Q14721 858 aa19.72■□□□□ 0.75
IRF3-216ENST00000597180 CD302Q8IX05 232 aa19.72■□□□□ 0.75
IRF3-216ENST00000597180 ELOA2Q8IYF1 753 aaPredicted RBP19.72■□□□□ 0.75
IRF3-216ENST00000597180 RNF168Q8IYW5 571 aaPredicted RBP19.72■□□□□ 0.75
IRF3-216ENST00000597180 VPS52Q8N1B4 723 aa19.72■□□□□ 0.75
IRF3-216ENST00000597180 UROC1Q96N76 676 aa19.72■□□□□ 0.75
IRF3-216ENST00000597180 TSPAN18Q96SJ8 248 aa19.72■□□□□ 0.75
IRF3-216ENST00000597180 TCF25Q9BQ70 676 aa19.72■□□□□ 0.75
IRF3-216ENST00000597180 PAAF1Q9BRP4 392 aa19.72■□□□□ 0.75
IRF3-216ENST00000597180 CACNG4Q9UBN1 327 aa19.72■□□□□ 0.75
IRF3-216ENST00000597180 LACTBL1A8MY62 500 aa19.71■□□□□ 0.75
IRF3-216ENST00000597180 F8W810 466 aa19.71■□□□□ 0.75
IRF3-216ENST00000597180 KIAA0391O15091 583 aaKnown RBP19.71■□□□□ 0.75
IRF3-216ENST00000597180 TGFB1I1O43294 461 aa19.71■□□□□ 0.75
IRF3-216ENST00000597180 CSPG5O95196 566 aa19.71■□□□□ 0.75
IRF3-216ENST00000597180 ACOT2P49753 483 aa19.71■□□□□ 0.75
IRF3-216ENST00000597180 UBE2HP62256 183 aa19.71■□□□□ 0.75
IRF3-216ENST00000597180 SNRPFP62306 86 aaKnown RBP19.71■□□□□ 0.75
IRF3-216ENST00000597180 SOX4Q06945 474 aaPredicted RBP19.71■□□□□ 0.75
IRF3-216ENST00000597180 COL19A1Q14993 1142 aa19.71■□□□□ 0.75
IRF3-216ENST00000597180 CRELD2Q6UXH1 353 aaPredicted RBP19.71■□□□□ 0.75
IRF3-216ENST00000597180 ADGRD2Q7Z7M1 963 aa19.71■□□□□ 0.75
IRF3-216ENST00000597180 CCDC47Q96A33 483 aaKnown RBP19.71■□□□□ 0.75
IRF3-216ENST00000597180 CBWD1Q9BRT8 395 aa19.71■□□□□ 0.75
IRF3-216ENST00000597180 ENTPD7Q9NQZ7 604 aa19.71■□□□□ 0.75
IRF3-216ENST00000597180 PCDHGC5Q9Y5F6 944 aa19.71■□□□□ 0.75
IRF3-216ENST00000597180 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms