RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 TOPORSQ9NS56 1045 aaPredicted RBP18.33■□□□□ 0.53
SHKBP1-205ENST00000594973 SPATS2LQ9NUQ6 558 aaKnown RBP18.33■□□□□ 0.53
SHKBP1-205ENST00000594973 WDR81Q562E7 1941 aa18.33■□□□□ 0.53
SHKBP1-205ENST00000594973 E7EVH7 732 aa18.33■□□□□ 0.52
SHKBP1-205ENST00000594973 MAPK13O15264 365 aa18.33■□□□□ 0.52
SHKBP1-205ENST00000594973 DNAJC8O75937 253 aaPredicted RBP18.33■□□□□ 0.52
SHKBP1-205ENST00000594973 DLATP10515 647 aaKnown RBP18.33■□□□□ 0.52
SHKBP1-205ENST00000594973 EDNRBP24530 442 aa18.33■□□□□ 0.52
SHKBP1-205ENST00000594973 ANXA13P27216 316 aa18.33■□□□□ 0.52
SHKBP1-205ENST00000594973 KAT5Q92993 513 aa18.33■□□□□ 0.52
SHKBP1-205ENST00000594973 ELMO3Q96BJ8 720 aa18.33■□□□□ 0.52
SHKBP1-205ENST00000594973 HINFPQ9BQA5 517 aa18.33■□□□□ 0.52
SHKBP1-205ENST00000594973 RBPJLQ9UBG7 517 aa18.33■□□□□ 0.52
SHKBP1-205ENST00000594973 GSTTP1A0A1W2PQM5 241 aa18.32■□□□□ 0.52
SHKBP1-205ENST00000594973 GGPS1O95749 300 aa18.32■□□□□ 0.52
SHKBP1-205ENST00000594973 H2AFZP0C0S5 128 aa18.32■□□□□ 0.52
SHKBP1-205ENST00000594973 GHRP10912 638 aa18.32■□□□□ 0.52
SHKBP1-205ENST00000594973 INHBEP58166 350 aa18.32■□□□□ 0.52
SHKBP1-205ENST00000594973 ADCY2Q08462 1091 aa18.32■□□□□ 0.52
SHKBP1-205ENST00000594973 SLMAPQ14BN4 828 aa18.32■□□□□ 0.52
SHKBP1-205ENST00000594973 H2AFVQ71UI9 128 aa18.32■□□□□ 0.52
SHKBP1-205ENST00000594973 OLIG1Q8TAK6 271 aa18.32■□□□□ 0.52
SHKBP1-205ENST00000594973 PARD3BQ8TEW8 1205 aa18.32■□□□□ 0.52
SHKBP1-205ENST00000594973 FAM84AQ96KN4 292 aa18.32■□□□□ 0.52
SHKBP1-205ENST00000594973 FAM213AQ9BRX8 229 aa18.32■□□□□ 0.52
SHKBP1-205ENST00000594973 OSBPL7Q9BZF2 842 aa18.32■□□□□ 0.52
SHKBP1-205ENST00000594973 ARHGAP28Q9P2N2 729 aa18.32■□□□□ 0.52
SHKBP1-205ENST00000594973 NENFQ9UMX5 172 aa18.32■□□□□ 0.52
SHKBP1-205ENST00000594973 PAPPA2Q9BXP8 1791 aa18.32■□□□□ 0.52
SHKBP1-205ENST00000594973 GMNCA6NCL1 334 aa18.32■□□□□ 0.52
SHKBP1-205ENST00000594973 P4HA2O15460 535 aa18.32■□□□□ 0.52
SHKBP1-205ENST00000594973 RTP1P59025 263 aa18.32■□□□□ 0.52
SHKBP1-205ENST00000594973 MRPS25P82663 173 aaKnown RBP18.32■□□□□ 0.52
SHKBP1-205ENST00000594973 PAK2Q13177 524 aa18.32■□□□□ 0.52
SHKBP1-205ENST00000594973 PPIL2Q13356 520 aa18.32■□□□□ 0.52
SHKBP1-205ENST00000594973 PPM1KQ8N3J5 372 aa18.32■□□□□ 0.52
SHKBP1-205ENST00000594973 SLC30A5Q8TAD4 765 aa18.32■□□□□ 0.52
SHKBP1-205ENST00000594973 ASAP3Q8TDY4 903 aa18.32■□□□□ 0.52
SHKBP1-205ENST00000594973 SLC7A3Q8WY07 619 aa18.32■□□□□ 0.52
SHKBP1-205ENST00000594973 PCYT2Q99447 389 aa18.32■□□□□ 0.52
SHKBP1-205ENST00000594973 HAUS2Q9NVX0 235 aa18.32■□□□□ 0.52
SHKBP1-205ENST00000594973 TSKSQ9UJT2 592 aa18.32■□□□□ 0.52
SHKBP1-205ENST00000594973 KCNH4Q9UQ05 1017 aa18.32■□□□□ 0.52
SHKBP1-205ENST00000594973 LRRIQ4A6NIV6 560 aa18.31■□□□□ 0.52
SHKBP1-205ENST00000594973 DNM1LO00429 736 aa18.31■□□□□ 0.52
SHKBP1-205ENST00000594973 ABCB4P21439 1286 aa18.31■□□□□ 0.52
SHKBP1-205ENST00000594973 RFX1P22670 979 aa18.31■□□□□ 0.52
SHKBP1-205ENST00000594973 BRDTQ58F21 947 aaPredicted RBP18.31■□□□□ 0.52
SHKBP1-205ENST00000594973 MEI1Q5TIA1 1274 aa18.31■□□□□ 0.52
SHKBP1-205ENST00000594973 CRELD2Q6UXH1 353 aaPredicted RBP18.31■□□□□ 0.52
SHKBP1-205ENST00000594973 PALB2Q86YC2 1186 aa18.31■□□□□ 0.52
SHKBP1-205ENST00000594973 SEMA4DQ92854 862 aa18.31■□□□□ 0.52
SHKBP1-205ENST00000594973 GDF3Q9NR23 364 aa18.31■□□□□ 0.52
SHKBP1-205ENST00000594973 HOMER3Q9NSC5 361 aa18.31■□□□□ 0.52
SHKBP1-205ENST00000594973 LOC285556D6RIA3 1793 aa18.31■□□□□ 0.52
SHKBP1-205ENST00000594973 MYH9P35579 1960 aaKnown RBP18.31■□□□□ 0.52
SHKBP1-205ENST00000594973 C5orf60A6NFR6 353 aa18.31■□□□□ 0.52
SHKBP1-205ENST00000594973 BTNL10A8MVZ5 291 aa18.31■□□□□ 0.52
SHKBP1-205ENST00000594973 TNFAIP3P21580 790 aa18.31■□□□□ 0.52
SHKBP1-205ENST00000594973 TCF7P36402 384 aaPredicted RBP18.31■□□□□ 0.52
SHKBP1-205ENST00000594973 PAFAH1B1P43034 410 aa18.31■□□□□ 0.52
SHKBP1-205ENST00000594973 LIG4P49917 911 aa18.31■□□□□ 0.52
SHKBP1-205ENST00000594973 STAT5BP51692 787 aa18.31■□□□□ 0.52
SHKBP1-205ENST00000594973 GALCP54803 685 aa18.31■□□□□ 0.52
SHKBP1-205ENST00000594973 SLC7A5Q01650 507 aa18.31■□□□□ 0.52
SHKBP1-205ENST00000594973 MOGSQ13724 837 aa18.31■□□□□ 0.52
SHKBP1-205ENST00000594973 KRT39Q6A163 491 aa18.31■□□□□ 0.52
SHKBP1-205ENST00000594973 C8orf74Q6P047 294 aa18.31■□□□□ 0.52
SHKBP1-205ENST00000594973 SLC20A1Q8WUM9 679 aa18.31■□□□□ 0.52
SHKBP1-205ENST00000594973 L3MBTL3Q96JM7 780 aaPredicted RBP18.31■□□□□ 0.52
SHKBP1-205ENST00000594973 ARID2Q68CP9 1835 aa18.3■□□□□ 0.52
SHKBP1-205ENST00000594973 A0A0G2JMZ2 1700 aa18.3■□□□□ 0.52
SHKBP1-205ENST00000594973 ARIH2O95376 493 aa18.3■□□□□ 0.52
SHKBP1-205ENST00000594973 GLRA2P23416 452 aa18.3■□□□□ 0.52
SHKBP1-205ENST00000594973 MARK3P27448 753 aa18.3■□□□□ 0.52
SHKBP1-205ENST00000594973 SCTRP47872 440 aa18.3■□□□□ 0.52
SHKBP1-205ENST00000594973 RNASE9P60153 205 aaKnown RBP18.3■□□□□ 0.52
SHKBP1-205ENST00000594973 AP1ARQ63HQ0 302 aa18.3■□□□□ 0.52
SHKBP1-205ENST00000594973 GPD1LQ8N335 351 aa18.3■□□□□ 0.52
SHKBP1-205ENST00000594973 ZC3H15Q8WU90 426 aaKnown RBP18.3■□□□□ 0.52
SHKBP1-205ENST00000594973 PORCNQ9H237 461 aa18.3■□□□□ 0.52
SHKBP1-205ENST00000594973 DHX33Q9H6R0 707 aaKnown RBP18.3■□□□□ 0.52
SHKBP1-205ENST00000594973 ZNF408Q9H9D4 720 aa18.3■□□□□ 0.52
SHKBP1-205ENST00000594973 EBF2Q9HAK2 575 aa18.3■□□□□ 0.52
SHKBP1-205ENST00000594973 TAS2R14Q9NYV8 317 aa18.3■□□□□ 0.52
SHKBP1-205ENST00000594973 IGKV6D-21A0A0A0MT36 114 aa18.29■□□□□ 0.52
SHKBP1-205ENST00000594973 SLC25A27O95847 323 aa18.29■□□□□ 0.52
SHKBP1-205ENST00000594973 GCKP35557 465 aa18.29■□□□□ 0.52
SHKBP1-205ENST00000594973 CYP24A1Q07973 514 aa18.29■□□□□ 0.52
SHKBP1-205ENST00000594973 STRN3Q13033 797 aa18.29■□□□□ 0.52
SHKBP1-205ENST00000594973 KCTD2Q14681 263 aa18.29■□□□□ 0.52
SHKBP1-205ENST00000594973 E2F5Q15329 346 aa18.29■□□□□ 0.52
SHKBP1-205ENST00000594973 DEPTORQ8TB45 409 aa18.29■□□□□ 0.52
SHKBP1-205ENST00000594973 TAS1R2Q8TE23 839 aa18.29■□□□□ 0.52
SHKBP1-205ENST00000594973 PIK3R5Q8WYR1 880 aa18.29■□□□□ 0.52
SHKBP1-205ENST00000594973 TATDN2Q93075 761 aa18.29■□□□□ 0.52
SHKBP1-205ENST00000594973 SYT11Q9BT88 431 aa18.29■□□□□ 0.52
SHKBP1-205ENST00000594973 KDM4CQ9H3R0 1056 aa18.29■□□□□ 0.52
SHKBP1-205ENST00000594973 ECM2O94769 699 aaPredicted RBP18.29■□□□□ 0.52
SHKBP1-205ENST00000594973 KIF22Q14807 665 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms