RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 CSPP1Q1MSJ5 1256 aa12.6□□□□□ -0.39
VMP1-211ENST00000591315 ALKAL1Q6UXT8 129 aa12.6□□□□□ -0.39
VMP1-211ENST00000591315 EP400NLQ6ZTU2 488 aa12.6□□□□□ -0.39
VMP1-211ENST00000591315 VPS52Q8N1B4 723 aa12.6□□□□□ -0.39
VMP1-211ENST00000591315 VN1R2Q8NFZ6 395 aa12.6□□□□□ -0.39
VMP1-211ENST00000591315 HASPINQ8TF76 798 aa12.6□□□□□ -0.39
VMP1-211ENST00000591315 C18orf25Q96B23 403 aaPredicted RBP12.6□□□□□ -0.39
VMP1-211ENST00000591315 TMEM169Q96HH4 297 aa12.6□□□□□ -0.39
VMP1-211ENST00000591315 B3GALT6Q96L58 329 aa12.6□□□□□ -0.39
VMP1-211ENST00000591315 SNX27Q96L92 541 aa12.6□□□□□ -0.39
VMP1-211ENST00000591315 ACAP3Q96P50 834 aa12.6□□□□□ -0.39
VMP1-211ENST00000591315 PPP1R10Q96QC0 940 aaKnown RBP12.6□□□□□ -0.39
VMP1-211ENST00000591315 RPS6KC1Q96S38 1066 aa12.6□□□□□ -0.39
VMP1-211ENST00000591315 TCF25Q9BQ70 676 aa12.6□□□□□ -0.39
VMP1-211ENST00000591315 TMEM175Q9BSA9 504 aa12.6□□□□□ -0.39
VMP1-211ENST00000591315 CCDC94Q9BW85 323 aaPredicted RBP12.6□□□□□ -0.39
VMP1-211ENST00000591315 CUEDC2Q9H467 287 aa12.6□□□□□ -0.39
VMP1-211ENST00000591315 ST6GALNAC4Q9H4F1 302 aa12.6□□□□□ -0.39
VMP1-211ENST00000591315 KCNG1Q9UIX4 513 aa12.6□□□□□ -0.39
VMP1-211ENST00000591315 PDCD11Q14690 1871 aaKnown RBP12.59□□□□□ -0.39
VMP1-211ENST00000591315 A0A0B4J269 797 aa12.59□□□□□ -0.39
VMP1-211ENST00000591315 A0A1W2PQ27 194 aa12.59□□□□□ -0.39
VMP1-211ENST00000591315 A0A1W2PQ64 194 aa12.59□□□□□ -0.39
VMP1-211ENST00000591315 A0A1W2PQD8 194 aa12.59□□□□□ -0.39
VMP1-211ENST00000591315 H3BQ06 376 aaPredicted RBP12.59□□□□□ -0.39
VMP1-211ENST00000591315 KLRC4O43908 158 aa12.59□□□□□ -0.39
VMP1-211ENST00000591315 ADSSP30520 456 aa12.59□□□□□ -0.39
VMP1-211ENST00000591315 LTBRP36941 435 aa12.59□□□□□ -0.39
VMP1-211ENST00000591315 ANP32AP39687 249 aaKnown RBP12.59□□□□□ -0.39
VMP1-211ENST00000591315 SYKP43405 635 aa12.59□□□□□ -0.39
VMP1-211ENST00000591315 KCNQ1P51787 676 aa12.59□□□□□ -0.39
VMP1-211ENST00000591315 KRT17Q04695 432 aa12.59□□□□□ -0.39
VMP1-211ENST00000591315 TUSC3Q13454 348 aa12.59□□□□□ -0.39
VMP1-211ENST00000591315 XKR4Q5GH76 650 aa12.59□□□□□ -0.39
VMP1-211ENST00000591315 L1TD1Q5T7N2 865 aaKnown RBP12.59□□□□□ -0.39
VMP1-211ENST00000591315 CNNM4Q6P4Q7 775 aa12.59□□□□□ -0.39
VMP1-211ENST00000591315 CD300LGQ6UXG3 332 aa12.59□□□□□ -0.39
VMP1-211ENST00000591315 TMC7Q7Z402 723 aa12.59□□□□□ -0.39
VMP1-211ENST00000591315 DDX53Q86TM3 631 aaKnown RBP12.59□□□□□ -0.39
VMP1-211ENST00000591315 CCDC65Q8IXS2 484 aa12.59□□□□□ -0.39
VMP1-211ENST00000591315 FAM84AQ96KN4 292 aa12.59□□□□□ -0.39
VMP1-211ENST00000591315 MSTO1Q9BUK6 570 aa12.59□□□□□ -0.39
VMP1-211ENST00000591315 GPR62Q9BZJ7 368 aa12.59□□□□□ -0.39
VMP1-211ENST00000591315 ZBP1Q9H171 429 aa12.59□□□□□ -0.39
VMP1-211ENST00000591315 TLE6Q9H808 572 aa12.59□□□□□ -0.39
VMP1-211ENST00000591315 UBE2ZQ9H832 354 aaPredicted RBP12.59□□□□□ -0.39
VMP1-211ENST00000591315 ENTPD7Q9NQZ7 604 aa12.59□□□□□ -0.39
VMP1-211ENST00000591315 OLFML3Q9NRN5 406 aa12.59□□□□□ -0.39
VMP1-211ENST00000591315 CLDND1Q9NY35 253 aa12.59□□□□□ -0.39
VMP1-211ENST00000591315 THEGQ9P2T0 379 aa12.59□□□□□ -0.39
VMP1-211ENST00000591315 SEL1LQ9UBV2 794 aa12.59□□□□□ -0.39
VMP1-211ENST00000591315 LZTS1Q9Y250 596 aa12.59□□□□□ -0.39
VMP1-211ENST00000591315 ANK1P16157 1881 aa12.59□□□□□ -0.39
VMP1-211ENST00000591315 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.58□□□□□ -0.4
VMP1-211ENST00000591315 C2orf71A6NGG8 1288 aa12.58□□□□□ -0.4
VMP1-211ENST00000591315 LACTBL1A8MY62 500 aa12.58□□□□□ -0.4
VMP1-211ENST00000591315 GADD45BO75293 160 aaPredicted RBP12.58□□□□□ -0.4
VMP1-211ENST00000591315 KIF4AO95239 1232 aa12.58□□□□□ -0.4
VMP1-211ENST00000591315 CXCL14O95715 111 aa12.58□□□□□ -0.4
VMP1-211ENST00000591315 GLP2RO95838 553 aa12.58□□□□□ -0.4
VMP1-211ENST00000591315 EFEMP2O95967 443 aa12.58□□□□□ -0.4
VMP1-211ENST00000591315 THP07101 528 aa12.58□□□□□ -0.4
VMP1-211ENST00000591315 KCNA5P22460 613 aa12.58□□□□□ -0.4
VMP1-211ENST00000591315 ACOT2P49753 483 aa12.58□□□□□ -0.4
VMP1-211ENST00000591315 GUCY2FP51841 1108 aa12.58□□□□□ -0.4
VMP1-211ENST00000591315 EHHADHQ08426 723 aa12.58□□□□□ -0.4
VMP1-211ENST00000591315 COL19A1Q14993 1142 aa12.58□□□□□ -0.4
VMP1-211ENST00000591315 CLUL1Q15846 466 aa12.58□□□□□ -0.4
VMP1-211ENST00000591315 ENOX2Q16206 610 aaKnown RBP12.58□□□□□ -0.4
VMP1-211ENST00000591315 UNC13DQ70J99 1090 aa12.58□□□□□ -0.4
VMP1-211ENST00000591315 APBB1IPQ7Z5R6 666 aaPredicted RBP12.58□□□□□ -0.4
VMP1-211ENST00000591315 CEP57L1Q8IYX8 460 aa12.58□□□□□ -0.4
VMP1-211ENST00000591315 C3orf58Q8NDZ4 430 aa12.58□□□□□ -0.4
VMP1-211ENST00000591315 FEZF2Q8TBJ5 459 aa12.58□□□□□ -0.4
VMP1-211ENST00000591315 HLA-CQ95604 372 aa12.58□□□□□ -0.4
VMP1-211ENST00000591315 ACCSQ96QU6 501 aa12.58□□□□□ -0.4
VMP1-211ENST00000591315 SLC39A2Q9NP94 309 aa12.58□□□□□ -0.4
VMP1-211ENST00000591315 PUF60Q9UHX1 559 aaKnown RBP12.58□□□□□ -0.4
VMP1-211ENST00000591315 BDP1A6H8Y1 2624 aa12.58□□□□□ -0.4
VMP1-211ENST00000591315 ZMYM2Q9UBW7 1377 aa12.57□□□□□ -0.4
VMP1-211ENST00000591315 VWA8A3KMH1 1905 aa12.57□□□□□ -0.4
VMP1-211ENST00000591315 GOLGA8IPA6NC78 632 aa12.57□□□□□ -0.4
VMP1-211ENST00000591315 GOLGA8JA6NMD2 632 aa12.57□□□□□ -0.4
VMP1-211ENST00000591315 I3L4J1 428 aa12.57□□□□□ -0.4
VMP1-211ENST00000591315 C2CD2LO14523 706 aa12.57□□□□□ -0.4
VMP1-211ENST00000591315 OGTO15294 1046 aa12.57□□□□□ -0.4
VMP1-211ENST00000591315 TBX10O75333 385 aa12.57□□□□□ -0.4
VMP1-211ENST00000591315 CTSAP10619 480 aa12.57□□□□□ -0.4
VMP1-211ENST00000591315 KCNE1P15382 129 aa12.57□□□□□ -0.4
VMP1-211ENST00000591315 CA8P35219 290 aa12.57□□□□□ -0.4
VMP1-211ENST00000591315 CLCNKBP51801 687 aa12.57□□□□□ -0.4
VMP1-211ENST00000591315 YARSP54577 528 aaKnown RBP12.57□□□□□ -0.4
VMP1-211ENST00000591315 WNT7BP56706 349 aa12.57□□□□□ -0.4
VMP1-211ENST00000591315 AMPD3Q01432 767 aa12.57□□□□□ -0.4
VMP1-211ENST00000591315 HSP90AA2PQ14568 343 aaPredicted RBP12.57□□□□□ -0.4
VMP1-211ENST00000591315 DUSP6Q16828 381 aa12.57□□□□□ -0.4
VMP1-211ENST00000591315 CTC1Q2NKJ3 1217 aa12.57□□□□□ -0.4
VMP1-211ENST00000591315 FAM26FQ5R3K3 315 aa12.57□□□□□ -0.4
VMP1-211ENST00000591315 LLGL2Q6P1M3 1020 aa12.57□□□□□ -0.4
VMP1-211ENST00000591315 CRELD2Q6UXH1 353 aaPredicted RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms