RNA–Protein interactions for RNA: ENST00000585726.5

RETREG3-202, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 522 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-202ENST00000585726 PRG3Q9Y2Y8 225 aaPredicted RBP23.39■■□□□ 1.33
RETREG3-202ENST00000585726 PCDHA5Q9Y5H7 936 aa23.39■■□□□ 1.33
RETREG3-202ENST00000585726 ZMYM2Q9UBW7 1377 aa23.39■■□□□ 1.33
RETREG3-202ENST00000585726 UBE4BO95155 1302 aa23.38■■□□□ 1.33
RETREG3-202ENST00000585726 GOLGA6L22H0YM25 854 aa23.38■■□□□ 1.33
RETREG3-202ENST00000585726 MEFVO15553 781 aaPredicted RBP23.38■■□□□ 1.33
RETREG3-202ENST00000585726 ALDH2P05091 517 aa23.38■■□□□ 1.33
RETREG3-202ENST00000585726 SPAG1Q07617 926 aa23.38■■□□□ 1.33
RETREG3-202ENST00000585726 KYAT1Q16773 422 aa23.38■■□□□ 1.33
RETREG3-202ENST00000585726 SLC10A6Q3KNW5 377 aa23.38■■□□□ 1.33
RETREG3-202ENST00000585726 COLGALT2Q8IYK4 626 aa23.38■■□□□ 1.33
RETREG3-202ENST00000585726 SLC39A11Q8N1S5 342 aa23.38■■□□□ 1.33
RETREG3-202ENST00000585726 FAM213AQ9BRX8 229 aa23.38■■□□□ 1.33
RETREG3-202ENST00000585726 MAPK8IP1Q9UQF2 711 aa23.38■■□□□ 1.33
RETREG3-202ENST00000585726 FAN1Q9Y2M0 1017 aa23.38■■□□□ 1.33
RETREG3-202ENST00000585726 RALGAPA2Q2PPJ7 1873 aa23.38■■□□□ 1.33
RETREG3-202ENST00000585726 SMIM28A0A1B0GU29 152 aa23.37■■□□□ 1.33
RETREG3-202ENST00000585726 GOLGA8IPA6NC78 632 aa23.37■■□□□ 1.33
RETREG3-202ENST00000585726 CASTOR2A6NHX0 329 aa23.37■■□□□ 1.33
RETREG3-202ENST00000585726 GOLGA8JA6NMD2 632 aa23.37■■□□□ 1.33
RETREG3-202ENST00000585726 NRP1O14786 923 aa23.37■■□□□ 1.33
RETREG3-202ENST00000585726 CLIC2O15247 247 aa23.37■■□□□ 1.33
RETREG3-202ENST00000585726 TGFB1I1O43294 461 aa23.37■■□□□ 1.33
RETREG3-202ENST00000585726 FAM189A1O60320 539 aa23.37■■□□□ 1.33
RETREG3-202ENST00000585726 GARTP22102 1010 aa23.37■■□□□ 1.33
RETREG3-202ENST00000585726 PPM1AP35813 382 aa23.37■■□□□ 1.33
RETREG3-202ENST00000585726 CAMK4Q16566 473 aa23.37■■□□□ 1.33
RETREG3-202ENST00000585726 KNOP1Q1ED39 458 aaKnown RBP23.37■■□□□ 1.33
RETREG3-202ENST00000585726 BMT2Q1RMZ1 405 aa23.37■■□□□ 1.33
RETREG3-202ENST00000585726 ISM2Q6H9L7 571 aa23.37■■□□□ 1.33
RETREG3-202ENST00000585726 ALKAL1Q6UXT8 129 aa23.37■■□□□ 1.33
RETREG3-202ENST00000585726 TMEM173Q86WV6 379 aaPredicted RBP23.37■■□□□ 1.33
RETREG3-202ENST00000585726 ZSWIM2Q8NEG5 633 aa23.37■■□□□ 1.33
RETREG3-202ENST00000585726 SPPL3Q8TCT6 385 aa23.37■■□□□ 1.33
RETREG3-202ENST00000585726 TMEM175Q9BSA9 504 aa23.37■■□□□ 1.33
RETREG3-202ENST00000585726 RMND1Q9NWS8 449 aa23.37■■□□□ 1.33
RETREG3-202ENST00000585726 CPSF3Q9UKF6 684 aaKnown RBP23.37■■□□□ 1.33
RETREG3-202ENST00000585726 COL4A4P53420 1690 aaPredicted RBP23.36■■□□□ 1.33
RETREG3-202ENST00000585726 LACTBL1A8MY62 500 aa23.36■■□□□ 1.33
RETREG3-202ENST00000585726 KRT17Q04695 432 aa23.36■■□□□ 1.33
RETREG3-202ENST00000585726 PPP2R3AQ06190 1150 aa23.36■■□□□ 1.33
RETREG3-202ENST00000585726 DSC1Q08554 894 aa23.36■■□□□ 1.33
RETREG3-202ENST00000585726 TUSC3Q13454 348 aa23.36■■□□□ 1.33
RETREG3-202ENST00000585726 ENOX2Q16206 610 aaKnown RBP23.36■■□□□ 1.33
RETREG3-202ENST00000585726 ELOA2Q8IYF1 753 aaPredicted RBP23.36■■□□□ 1.33
RETREG3-202ENST00000585726 SMYD4Q8IYR2 804 aaPredicted RBP23.36■■□□□ 1.33
RETREG3-202ENST00000585726 POF1BQ8WVV4 589 aa23.36■■□□□ 1.33
RETREG3-202ENST00000585726 TMEM169Q96HH4 297 aa23.36■■□□□ 1.33
RETREG3-202ENST00000585726 ZMAT2Q96NC0 199 aaKnown RBP23.36■■□□□ 1.33
RETREG3-202ENST00000585726 GSDMAQ96QA5 445 aa23.36■■□□□ 1.33
RETREG3-202ENST00000585726 AGPAT3Q9NRZ7 376 aa23.36■■□□□ 1.33
RETREG3-202ENST00000585726 DNAJB1P25685 340 aa23.35■■□□□ 1.33
RETREG3-202ENST00000585726 PTPROQ16827 1216 aa23.35■■□□□ 1.33
RETREG3-202ENST00000585726 XKR4Q5GH76 650 aa23.35■■□□□ 1.33
RETREG3-202ENST00000585726 HS2ST1Q7LGA3 356 aa23.35■■□□□ 1.33
RETREG3-202ENST00000585726 BCL7CQ8WUZ0 217 aaPredicted RBP23.35■■□□□ 1.33
RETREG3-202ENST00000585726 PPM1EQ8WY54 764 aa23.35■■□□□ 1.33
RETREG3-202ENST00000585726 PPP1R10Q96QC0 940 aaKnown RBP23.35■■□□□ 1.33
RETREG3-202ENST00000585726 CNTN3Q9P232 1028 aa23.35■■□□□ 1.33
RETREG3-202ENST00000585726 MTCH2Q9Y6C9 303 aa23.35■■□□□ 1.33
RETREG3-202ENST00000585726 CHD7Q9P2D1 2997 aa23.34■■□□□ 1.33
RETREG3-202ENST00000585726 F8W810 466 aa23.34■■□□□ 1.33
RETREG3-202ENST00000585726 CCDC85BQ15834 202 aaPredicted RBP23.34■■□□□ 1.33
RETREG3-202ENST00000585726 CRELD2Q6UXH1 353 aaPredicted RBP23.34■■□□□ 1.33
RETREG3-202ENST00000585726 MICAL1Q8TDZ2 1067 aa23.34■■□□□ 1.33
RETREG3-202ENST00000585726 C18orf25Q96B23 403 aaPredicted RBP23.34■■□□□ 1.33
RETREG3-202ENST00000585726 KIF12Q96FN5 646 aa23.34■■□□□ 1.33
RETREG3-202ENST00000585726 IGSF21Q96ID5 467 aa23.34■■□□□ 1.33
RETREG3-202ENST00000585726 PAAF1Q9BRP4 392 aa23.34■■□□□ 1.33
RETREG3-202ENST00000585726 PLEKHA5Q9HAU0 1116 aa23.34■■□□□ 1.33
RETREG3-202ENST00000585726 GOLGA2P5Q9HBQ8 144 aa23.34■■□□□ 1.33
RETREG3-202ENST00000585726 HSPBP1Q9NZL4 362 aa23.34■■□□□ 1.33
RETREG3-202ENST00000585726 PUF60Q9UHX1 559 aaKnown RBP23.34■■□□□ 1.33
RETREG3-202ENST00000585726 TTC26A0AVF1 554 aa23.33■■□□□ 1.33
RETREG3-202ENST00000585726 EXTL3O43909 919 aa23.33■■□□□ 1.33
RETREG3-202ENST00000585726 KIF20AO95235 890 aa23.33■■□□□ 1.33
RETREG3-202ENST00000585726 LDHAP00338 332 aaKnown RBP23.33■■□□□ 1.33
RETREG3-202ENST00000585726 KCNE1P15382 129 aa23.33■■□□□ 1.33
RETREG3-202ENST00000585726 CYP2J2P51589 502 aa23.33■■□□□ 1.33
RETREG3-202ENST00000585726 PLCB3Q01970 1234 aa23.33■■□□□ 1.33
RETREG3-202ENST00000585726 NAB2Q15742 525 aa23.33■■□□□ 1.33
RETREG3-202ENST00000585726 GPD1LQ8N335 351 aa23.33■■□□□ 1.33
RETREG3-202ENST00000585726 MRPL38Q96DV4 380 aaKnown RBP23.33■■□□□ 1.33
RETREG3-202ENST00000585726 COLEC11Q9BWP8 271 aa23.33■■□□□ 1.33
RETREG3-202ENST00000585726 SLC38A7Q9NVC3 462 aa23.33■■□□□ 1.33
RETREG3-202ENST00000585726 MAN1B1Q9UKM7 699 aa23.33■■□□□ 1.33
RETREG3-202ENST00000585726 TDRD15B5MCY1 1934 aaKnown RBP23.33■■□□□ 1.32
RETREG3-202ENST00000585726 CARNS1A5YM72 827 aa23.32■■□□□ 1.32
RETREG3-202ENST00000585726 BIN1O00499 593 aa23.32■■□□□ 1.32
RETREG3-202ENST00000585726 SOX4Q06945 474 aaPredicted RBP23.32■■□□□ 1.32
RETREG3-202ENST00000585726 ZNF658Q5TYW1 1059 aaPredicted RBP23.32■■□□□ 1.32
RETREG3-202ENST00000585726 TMEM130Q8N3G9 435 aa23.32■■□□□ 1.32
RETREG3-202ENST00000585726 RDH13Q8NBN7 331 aa23.32■■□□□ 1.32
RETREG3-202ENST00000585726 SPATA20Q8TB22 786 aa23.32■■□□□ 1.32
RETREG3-202ENST00000585726 HASPINQ8TF76 798 aa23.32■■□□□ 1.32
RETREG3-202ENST00000585726 LMAN2LQ9H0V9 348 aa23.32■■□□□ 1.32
RETREG3-202ENST00000585726 MARCH5Q9NX47 278 aa23.32■■□□□ 1.32
RETREG3-202ENST00000585726 STXBP5LQ9Y2K9 1186 aa23.32■■□□□ 1.32
RETREG3-202ENST00000585726 CA8P35219 290 aa23.31■■□□□ 1.32
RETREG3-202ENST00000585726 IRS1P35568 1242 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms