RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 ZC3H11AO75152 810 aaKnown RBP eCLIP15.09■□□□□ 0.01
TRAF4-215ENST00000584944 POMCP01189 267 aa15.09■□□□□ 0.01
TRAF4-215ENST00000584944 PROZP22891 400 aa15.09■□□□□ 0.01
TRAF4-215ENST00000584944 ACOT2P49753 483 aa15.09■□□□□ 0.01
TRAF4-215ENST00000584944 GATMP50440 423 aa15.09■□□□□ 0.01
TRAF4-215ENST00000584944 ERVK-21P61565 698 aa15.09■□□□□ 0.01
TRAF4-215ENST00000584944 BMT2Q1RMZ1 405 aa15.09■□□□□ 0.01
TRAF4-215ENST00000584944 SEZ6Q53EL9 994 aa15.09■□□□□ 0.01
TRAF4-215ENST00000584944 CLLU1OSQ5K130 101 aa15.09■□□□□ 0.01
TRAF4-215ENST00000584944 KLHL10Q6JEL2 608 aa15.09■□□□□ 0.01
TRAF4-215ENST00000584944 AGMOQ6ZNB7 445 aa15.09■□□□□ 0.01
TRAF4-215ENST00000584944 SMYD4Q8IYR2 804 aaPredicted RBP15.09■□□□□ 0.01
TRAF4-215ENST00000584944 SAAL1Q96ER3 474 aa15.09■□□□□ 0.01
TRAF4-215ENST00000584944 TGS1Q96RS0 853 aaKnown RBP15.09■□□□□ 0.01
TRAF4-215ENST00000584944 RNF39Q9H2S5 420 aa15.09■□□□□ 0.01
TRAF4-215ENST00000584944 AGPAT3Q9NRZ7 376 aa15.09■□□□□ 0.01
TRAF4-215ENST00000584944 SLC38A7Q9NVC3 462 aa15.09■□□□□ 0.01
TRAF4-215ENST00000584944 FRMD4BQ9Y2L6 1034 aa15.09■□□□□ 0.01
TRAF4-215ENST00000584944 R3HCC1Q9Y3T6 440 aaKnown RBP15.09■□□□□ 0.01
TRAF4-215ENST00000584944 COL4A4P53420 1690 aaPredicted RBP15.09■□□□□ 0.01
TRAF4-215ENST00000584944 BICDL2A1A5D9 508 aa15.08■□□□□ 0
TRAF4-215ENST00000584944 LINC01553A4QN01 128 aa15.08■□□□□ 0
TRAF4-215ENST00000584944 TISP43B9A030 160 aa15.08■□□□□ 0
TRAF4-215ENST00000584944 PDXKO00764 312 aa15.08■□□□□ 0
TRAF4-215ENST00000584944 CLIC2O15247 247 aa15.08■□□□□ 0
TRAF4-215ENST00000584944 XPOTO43592 962 aaKnown RBP15.08■□□□□ 0
TRAF4-215ENST00000584944 EXTL3O43909 919 aa15.08■□□□□ 0
TRAF4-215ENST00000584944 OFD1O75665 1012 aa15.08■□□□□ 0
TRAF4-215ENST00000584944 THP07101 528 aa15.08■□□□□ 0
TRAF4-215ENST00000584944 ATF7P17544 494 aaPredicted RBP15.08■□□□□ 0
TRAF4-215ENST00000584944 LAG3P18627 525 aa15.08■□□□□ 0
TRAF4-215ENST00000584944 CTNNB1P35222 781 aa15.08■□□□□ 0
TRAF4-215ENST00000584944 CAVIN1Q6NZI2 390 aaKnown RBP15.08■□□□□ 0
TRAF4-215ENST00000584944 USP37Q86T82 979 aa15.08■□□□□ 0
TRAF4-215ENST00000584944 GPD1LQ8N335 351 aa15.08■□□□□ 0
TRAF4-215ENST00000584944 SPATA20Q8TB22 786 aa15.08■□□□□ 0
TRAF4-215ENST00000584944 GDPD5Q8WTR4 605 aa15.08■□□□□ 0
TRAF4-215ENST00000584944 HLA-CQ95604 372 aa15.08■□□□□ 0
TRAF4-215ENST00000584944 ZFP42Q96MM3 310 aa15.08■□□□□ 0
TRAF4-215ENST00000584944 SAMD11Q96NU1 681 aa15.08■□□□□ 0
TRAF4-215ENST00000584944 CASD1Q96PB1 797 aa15.08■□□□□ 0
TRAF4-215ENST00000584944 PLEKHA5Q9HAU0 1116 aa15.08■□□□□ 0
TRAF4-215ENST00000584944 HSPBP1Q9NZL4 362 aa15.08■□□□□ 0
TRAF4-215ENST00000584944 GOLGA8IPA6NC78 632 aa15.07■□□□□ 0
TRAF4-215ENST00000584944 ZNF233A6NK53 670 aa15.07■□□□□ 0
TRAF4-215ENST00000584944 GOLGA8JA6NMD2 632 aa15.07■□□□□ 0
TRAF4-215ENST00000584944 MEIS3P2A8K0S8 358 aa15.07■□□□□ 0
TRAF4-215ENST00000584944 IL18RAPO95256 599 aa15.07■□□□□ 0
TRAF4-215ENST00000584944 CXCL8P10145 99 aa15.07■□□□□ 0
TRAF4-215ENST00000584944 PPM1AP35813 382 aa15.07■□□□□ 0
TRAF4-215ENST00000584944 PRCPP42785 496 aa15.07■□□□□ 0
TRAF4-215ENST00000584944 SCNN1GP51170 649 aa15.07■□□□□ 0
TRAF4-215ENST00000584944 GRIK3Q13003 919 aa15.07■□□□□ 0
TRAF4-215ENST00000584944 TPD52L1Q16890 204 aaPredicted RBP15.07■□□□□ 0
TRAF4-215ENST00000584944 SLC39A4Q6P5W5 647 aa15.07■□□□□ 0
TRAF4-215ENST00000584944 CD302Q8IX05 232 aa15.07■□□□□ 0
TRAF4-215ENST00000584944 CEP120Q8N960 986 aa15.07■□□□□ 0
TRAF4-215ENST00000584944 XXYLT1Q8NBI6 393 aa15.07■□□□□ 0
TRAF4-215ENST00000584944 ZNF689Q96CS4 500 aaPredicted RBP15.07■□□□□ 0
TRAF4-215ENST00000584944 DHTKD1Q96HY7 919 aaPredicted RBP15.07■□□□□ 0
TRAF4-215ENST00000584944 ZNF558Q96NG5 402 aa15.07■□□□□ 0
TRAF4-215ENST00000584944 CBWD1Q9BRT8 395 aa15.07■□□□□ 0
TRAF4-215ENST00000584944 TBC1D13Q9NVG8 400 aa15.07■□□□□ 0
TRAF4-215ENST00000584944 RBAKQ9NYW8 714 aaPredicted RBP15.07■□□□□ 0
TRAF4-215ENST00000584944 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.07■□□□□ 0
TRAF4-215ENST00000584944 MRPL42Q9Y6G3 142 aaKnown RBP15.07■□□□□ 0
TRAF4-215ENST00000584944 STYXL1Q9Y6J8 313 aa15.07■□□□□ 0
TRAF4-215ENST00000584944 ZMYM2Q9UBW7 1377 aa15.07■□□□□ 0
TRAF4-215ENST00000584944 TTC3P53804 2025 aa15.06■□□□□ 0
TRAF4-215ENST00000584944 CLSTN1O94985 981 aa15.06■□□□□ 0
TRAF4-215ENST00000584944 LETM1O95202 739 aaPredicted RBP15.06■□□□□ 0
TRAF4-215ENST00000584944 NR3C1P04150 777 aa15.06■□□□□ 0
TRAF4-215ENST00000584944 OR1G1P47890 313 aa15.06■□□□□ 0
TRAF4-215ENST00000584944 KRT17Q04695 432 aa15.06■□□□□ 0
TRAF4-215ENST00000584944 MORC3Q14149 939 aa15.06■□□□□ 0
TRAF4-215ENST00000584944 BMS1Q14692 1282 aaKnown RBP15.06■□□□□ 0
TRAF4-215ENST00000584944 SURF1Q15526 300 aa15.06■□□□□ 0
TRAF4-215ENST00000584944 KLHL40Q2TBA0 621 aa15.06■□□□□ 0
TRAF4-215ENST00000584944 GLRA4Q5JXX5 417 aa15.06■□□□□ 0
TRAF4-215ENST00000584944 CEP135Q66GS9 1140 aa15.06■□□□□ 0
TRAF4-215ENST00000584944 CRIPAKQ8N1N5 446 aa15.06■□□□□ 0
TRAF4-215ENST00000584944 MLKLQ8NB16 471 aa15.06■□□□□ 0
TRAF4-215ENST00000584944 RDH13Q8NBN7 331 aa15.06■□□□□ 0
TRAF4-215ENST00000584944 FBXO22Q8NEZ5 403 aa15.06■□□□□ 0
TRAF4-215ENST00000584944 KIF12Q96FN5 646 aa15.06■□□□□ 0
TRAF4-215ENST00000584944 SNX27Q96L92 541 aa15.06■□□□□ 0
TRAF4-215ENST00000584944 FNBP1Q96RU3 617 aa15.06■□□□□ 0
TRAF4-215ENST00000584944 C11orf84Q9BUA3 381 aaPredicted RBP15.06■□□□□ 0
TRAF4-215ENST00000584944 IKZF4Q9H2S9 585 aa15.06■□□□□ 0
TRAF4-215ENST00000584944 ABLIM1O14639 778 aa15.05■□□□□ -0
TRAF4-215ENST00000584944 CETN3O15182 167 aa15.05■□□□□ -0
TRAF4-215ENST00000584944 ALDH2P05091 517 aa15.05■□□□□ -0
TRAF4-215ENST00000584944 KRT13P13646 458 aa15.05■□□□□ -0
TRAF4-215ENST00000584944 NR2F2P24468 414 aa15.05■□□□□ -0
TRAF4-215ENST00000584944 ADSSP30520 456 aa15.05■□□□□ -0
TRAF4-215ENST00000584944 HOXD13P35453 343 aa15.05■□□□□ -0
TRAF4-215ENST00000584944 TNFSF9P41273 254 aa15.05■□□□□ -0
TRAF4-215ENST00000584944 LRRC63Q05C16 580 aa15.05■□□□□ -0
TRAF4-215ENST00000584944 PAK1Q13153 545 aa15.05■□□□□ -0
TRAF4-215ENST00000584944 TMEM132DQ14C87 1099 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms