RNA–Protein interactions for RNA: ENST00000582513.5

TRAPPC8-210, Transcript of trafficking protein particle complex 8, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC8, Length 3,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-210ENST00000582513 F5H6K3 240 aa16.46■□□□□ 0.23
TRAPPC8-210ENST00000582513 CHMP2AO43633 222 aa16.46■□□□□ 0.23
TRAPPC8-210ENST00000582513 GCNT3O95395 438 aa16.46■□□□□ 0.23
TRAPPC8-210ENST00000582513 GSTT2P0CG29 244 aa16.46■□□□□ 0.23
TRAPPC8-210ENST00000582513 GSTT2BP0CG30 244 aa16.46■□□□□ 0.23
TRAPPC8-210ENST00000582513 SKIP12755 728 aa16.46■□□□□ 0.23
TRAPPC8-210ENST00000582513 UCHL3P15374 230 aa16.46■□□□□ 0.23
TRAPPC8-210ENST00000582513 DRD4P21917 467 aa16.46■□□□□ 0.23
TRAPPC8-210ENST00000582513 YY1P25490 414 aa16.46■□□□□ 0.23
TRAPPC8-210ENST00000582513 TMED10P49755 219 aaKnown RBP16.46■□□□□ 0.23
TRAPPC8-210ENST00000582513 ERFP50548 548 aa16.46■□□□□ 0.23
TRAPPC8-210ENST00000582513 KLRC3Q07444 240 aa16.46■□□□□ 0.23
TRAPPC8-210ENST00000582513 RBM46Q8TBY0 533 aaKnown RBP16.46■□□□□ 0.23
TRAPPC8-210ENST00000582513 CASP10Q92851 521 aa16.46■□□□□ 0.23
TRAPPC8-210ENST00000582513 LUC7LQ9NQ29 371 aaKnown RBP16.46■□□□□ 0.23
TRAPPC8-210ENST00000582513 PNMA3Q9UL41 463 aa16.46■□□□□ 0.23
TRAPPC8-210ENST00000582513 SYNPO2Q9UMS6 1093 aa16.46■□□□□ 0.23
TRAPPC8-210ENST00000582513 DOLKQ9UPQ8 538 aa16.46■□□□□ 0.23
TRAPPC8-210ENST00000582513 RBMX2Q9Y388 322 aaKnown RBP16.46■□□□□ 0.23
TRAPPC8-210ENST00000582513 LTBP4Q8N2S1 1624 aa16.46■□□□□ 0.23
TRAPPC8-210ENST00000582513 TRIM64CA6NLI5 447 aa16.46■□□□□ 0.23
TRAPPC8-210ENST00000582513 NVLO15381 856 aaKnown RBP16.46■□□□□ 0.23
TRAPPC8-210ENST00000582513 OPHN1O60890 802 aa16.46■□□□□ 0.23
TRAPPC8-210ENST00000582513 UBXN2AP68543 259 aa16.46■□□□□ 0.23
TRAPPC8-210ENST00000582513 TSPY1Q01534 308 aa16.46■□□□□ 0.23
TRAPPC8-210ENST00000582513 KNOP1Q1ED39 458 aaKnown RBP16.46■□□□□ 0.23
TRAPPC8-210ENST00000582513 MEI1Q5TIA1 1274 aa16.46■□□□□ 0.23
TRAPPC8-210ENST00000582513 SH3BP5LQ7L8J4 393 aa16.46■□□□□ 0.23
TRAPPC8-210ENST00000582513 IQCKQ8N0W5 287 aa16.46■□□□□ 0.23
TRAPPC8-210ENST00000582513 SYN2Q92777 582 aaPredicted RBP16.46■□□□□ 0.23
TRAPPC8-210ENST00000582513 RNF25Q96BH1 459 aaPredicted RBP16.46■□□□□ 0.23
TRAPPC8-210ENST00000582513 DCDC2CA8MYV0 355 aa16.45■□□□□ 0.22
TRAPPC8-210ENST00000582513 GSTA2P09210 222 aa16.45■□□□□ 0.22
TRAPPC8-210ENST00000582513 PTDSS1P48651 473 aaKnown RBP16.45■□□□□ 0.22
TRAPPC8-210ENST00000582513 JAG1P78504 1218 aa16.45■□□□□ 0.22
TRAPPC8-210ENST00000582513 EXOC3L4Q17RC7 722 aa16.45■□□□□ 0.22
TRAPPC8-210ENST00000582513 LRRC34Q8IZ02 419 aa16.45■□□□□ 0.22
TRAPPC8-210ENST00000582513 NME8Q8N427 588 aa16.45■□□□□ 0.22
TRAPPC8-210ENST00000582513 ERMNQ8TAM6 284 aa16.45■□□□□ 0.22
TRAPPC8-210ENST00000582513 CASKIN2Q8WXE0 1202 aa16.45■□□□□ 0.22
TRAPPC8-210ENST00000582513 LENG9Q96B70 501 aa16.45■□□□□ 0.22
TRAPPC8-210ENST00000582513 PHF12Q96QT6 1004 aa16.45■□□□□ 0.22
TRAPPC8-210ENST00000582513 AP1M1Q9BXS5 423 aa16.45■□□□□ 0.22
TRAPPC8-210ENST00000582513 MKS1Q9NXB0 559 aa16.45■□□□□ 0.22
TRAPPC8-210ENST00000582513 AIPL1Q9NZN9 384 aa16.45■□□□□ 0.22
TRAPPC8-210ENST00000582513 EML1O00423 815 aa16.45■□□□□ 0.22
TRAPPC8-210ENST00000582513 RAD51CO43502 376 aa16.45■□□□□ 0.22
TRAPPC8-210ENST00000582513 XRCC5P13010 732 aaKnown RBP16.45■□□□□ 0.22
TRAPPC8-210ENST00000582513 PON1P27169 355 aa16.45■□□□□ 0.22
TRAPPC8-210ENST00000582513 ZNF76P36508 570 aa16.45■□□□□ 0.22
TRAPPC8-210ENST00000582513 CTTNQ14247 550 aaKnown RBP16.45■□□□□ 0.22
TRAPPC8-210ENST00000582513 FXNQ16595 210 aa16.45■□□□□ 0.22
TRAPPC8-210ENST00000582513 IRF2BP2Q7Z5L9 587 aa16.45■□□□□ 0.22
TRAPPC8-210ENST00000582513 SLFN12Q8IYM2 578 aa16.45■□□□□ 0.22
TRAPPC8-210ENST00000582513 MGARPQ8TDB4 240 aa16.45■□□□□ 0.22
TRAPPC8-210ENST00000582513 INPP4AQ96PE3 977 aaPredicted RBP16.45■□□□□ 0.22
TRAPPC8-210ENST00000582513 AFPP02771 609 aaKnown RBP16.45■□□□□ 0.22
TRAPPC8-210ENST00000582513 GSTA1P08263 222 aa16.45■□□□□ 0.22
TRAPPC8-210ENST00000582513 CTTNBP2NLQ9P2B4 639 aa16.45■□□□□ 0.22
TRAPPC8-210ENST00000582513 FAM198AQ9UFP1 575 aa16.45■□□□□ 0.22
TRAPPC8-210ENST00000582513 SLC12A4Q9UP95 1085 aa16.45■□□□□ 0.22
TRAPPC8-210ENST00000582513 MSH4O15457 936 aa16.44■□□□□ 0.22
TRAPPC8-210ENST00000582513 PDE5AO76074 875 aa16.44■□□□□ 0.22
TRAPPC8-210ENST00000582513 HARSP12081 509 aaKnown RBP16.44■□□□□ 0.22
TRAPPC8-210ENST00000582513 VARSP26640 1264 aaKnown RBP16.44■□□□□ 0.22
TRAPPC8-210ENST00000582513 MARSP56192 900 aaKnown RBP16.44■□□□□ 0.22
TRAPPC8-210ENST00000582513 DDX42Q86XP3 938 aaKnown RBP eCLIP16.44■□□□□ 0.22
TRAPPC8-210ENST00000582513 RIBC1Q8N443 379 aaPredicted RBP16.44■□□□□ 0.22
TRAPPC8-210ENST00000582513 SH3GL1Q99961 368 aa16.44■□□□□ 0.22
TRAPPC8-210ENST00000582513 AMNQ9BXJ7 453 aa16.44■□□□□ 0.22
TRAPPC8-210ENST00000582513 BCS1LQ9Y276 419 aa16.44■□□□□ 0.22
TRAPPC8-210ENST00000582513 TTLL13PA6NNM8 815 aa16.44■□□□□ 0.22
TRAPPC8-210ENST00000582513 NDUFB10O96000 172 aa16.44■□□□□ 0.22
TRAPPC8-210ENST00000582513 EDRF1Q3B7T1 1238 aa16.44■□□□□ 0.22
TRAPPC8-210ENST00000582513 LRRC8BQ6P9F7 803 aa16.44■□□□□ 0.22
TRAPPC8-210ENST00000582513 FBXO11Q86XK2 927 aa16.44■□□□□ 0.22
TRAPPC8-210ENST00000582513 CCDC17Q96LX7 622 aa16.44■□□□□ 0.22
TRAPPC8-210ENST00000582513 CATSPER2Q96P56 530 aa16.44■□□□□ 0.22
TRAPPC8-210ENST00000582513 CLIC5Q9NZA1 410 aa16.44■□□□□ 0.22
TRAPPC8-210ENST00000582513 TSKSQ9UJT2 592 aa16.44■□□□□ 0.22
TRAPPC8-210ENST00000582513 FOCADQ5VW36 1801 aa16.44■□□□□ 0.22
TRAPPC8-210ENST00000582513 ABLIM1O14639 778 aa16.43■□□□□ 0.22
TRAPPC8-210ENST00000582513 NR3C1P04150 777 aa16.43■□□□□ 0.22
TRAPPC8-210ENST00000582513 CALB2P22676 271 aa16.43■□□□□ 0.22
TRAPPC8-210ENST00000582513 RPS6KA1Q15418 735 aa16.43■□□□□ 0.22
TRAPPC8-210ENST00000582513 IRGCQ6NXR0 463 aa16.43■□□□□ 0.22
TRAPPC8-210ENST00000582513 ALKBH5Q6P6C2 394 aaKnown RBP16.43■□□□□ 0.22
TRAPPC8-210ENST00000582513 HHIPL2Q6UWX4 724 aa16.43■□□□□ 0.22
TRAPPC8-210ENST00000582513 SPATA24Q86W54 205 aa16.43■□□□□ 0.22
TRAPPC8-210ENST00000582513 SYT2Q8N9I0 419 aaPredicted RBP16.43■□□□□ 0.22
TRAPPC8-210ENST00000582513 PRPF31Q8WWY3 499 aaKnown RBP16.43■□□□□ 0.22
TRAPPC8-210ENST00000582513 TUT1Q9H6E5 874 aaKnown RBP16.43■□□□□ 0.22
TRAPPC8-210ENST00000582513 LY75O60449 1722 aa16.43■□□□□ 0.22
TRAPPC8-210ENST00000582513 BCRP11274 1271 aa16.43■□□□□ 0.22
TRAPPC8-210ENST00000582513 RPA1P27694 616 aa16.43■□□□□ 0.22
TRAPPC8-210ENST00000582513 NMT1P30419 496 aaKnown RBP16.43■□□□□ 0.22
TRAPPC8-210ENST00000582513 LRP8Q14114 963 aa16.43■□□□□ 0.22
TRAPPC8-210ENST00000582513 DPY19L2P1Q6NXN4 242 aa16.43■□□□□ 0.22
TRAPPC8-210ENST00000582513 LZICQ8WZA0 190 aa16.43■□□□□ 0.22
TRAPPC8-210ENST00000582513 CCDC127Q96BQ5 260 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms