RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 TNNI1P19237 187 aa24.4■■□□□ 1.5
CCDC47-204ENST00000582252 CYP2B6P20813 491 aa24.4■■□□□ 1.5
CCDC47-204ENST00000582252 MARK3P27448 753 aa24.4■■□□□ 1.5
CCDC47-204ENST00000582252 VSNL1P62760 191 aa24.4■■□□□ 1.5
CCDC47-204ENST00000582252 CBX1P83916 185 aa24.4■■□□□ 1.5
CCDC47-204ENST00000582252 PLCB4Q15147 1175 aa24.4■■□□□ 1.5
CCDC47-204ENST00000582252 TAPT1Q6NXT6 567 aa24.4■■□□□ 1.5
CCDC47-204ENST00000582252 SLFN11Q7Z7L1 901 aa24.4■■□□□ 1.5
CCDC47-204ENST00000582252 RPUSD2Q8IZ73 545 aaKnown RBP24.4■■□□□ 1.5
CCDC47-204ENST00000582252 PRPF31Q8WWY3 499 aaKnown RBP24.4■■□□□ 1.5
CCDC47-204ENST00000582252 KREMEN1Q96MU8 473 aa24.4■■□□□ 1.5
CCDC47-204ENST00000582252 TARS2Q9BW92 718 aaKnown RBP24.4■■□□□ 1.5
CCDC47-204ENST00000582252 MRPL4Q9BYD3 311 aaKnown RBP24.4■■□□□ 1.5
CCDC47-204ENST00000582252 RBAKQ9NYW8 714 aaPredicted RBP24.4■■□□□ 1.5
CCDC47-204ENST00000582252 A0A0B4J269 797 aa24.39■■□□□ 1.5
CCDC47-204ENST00000582252 PDE6CP51160 858 aa24.39■■□□□ 1.5
CCDC47-204ENST00000582252 LAMC2Q13753 1193 aa24.39■■□□□ 1.5
CCDC47-204ENST00000582252 TFDP1Q14186 410 aa24.39■■□□□ 1.5
CCDC47-204ENST00000582252 CDCA2Q69YH5 1023 aaPredicted RBP24.39■■□□□ 1.5
CCDC47-204ENST00000582252 C15orf39Q6ZRI6 1047 aa24.39■■□□□ 1.5
CCDC47-204ENST00000582252 PEX26Q7Z412 305 aa24.39■■□□□ 1.5
CCDC47-204ENST00000582252 PDGFCQ9NRA1 345 aa24.39■■□□□ 1.5
CCDC47-204ENST00000582252 IGKV6-21A0A0C4DH24 114 aa24.38■■□□□ 1.49
CCDC47-204ENST00000582252 TMCO5BA8MYB1 307 aa24.38■■□□□ 1.49
CCDC47-204ENST00000582252 RTN2O75298 545 aa24.38■■□□□ 1.49
CCDC47-204ENST00000582252 GZMAP12544 262 aa24.38■■□□□ 1.49
CCDC47-204ENST00000582252 NLRP11P59045 1033 aaKnown RBP24.38■■□□□ 1.49
CCDC47-204ENST00000582252 GLE1Q53GS7 698 aaKnown RBP24.38■■□□□ 1.49
CCDC47-204ENST00000582252 UBE2Q2Q8WVN8 375 aa24.38■■□□□ 1.49
CCDC47-204ENST00000582252 ARHGAP39Q9C0H5 1083 aa24.38■■□□□ 1.49
CCDC47-204ENST00000582252 ANKFY1Q9P2R3 1169 aa24.38■■□□□ 1.49
CCDC47-204ENST00000582252 SUCLA2Q9P2R7 463 aaPredicted RBP24.38■■□□□ 1.49
CCDC47-204ENST00000582252 TRPC6Q9Y210 931 aa24.38■■□□□ 1.49
CCDC47-204ENST00000582252 AP3M2P53677 418 aa24.38■■□□□ 1.49
CCDC47-204ENST00000582252 PRPF4BQ13523 1007 aaKnown RBP24.38■■□□□ 1.49
CCDC47-204ENST00000582252 ACVR2BQ13705 512 aa24.38■■□□□ 1.49
CCDC47-204ENST00000582252 ZACNQ401N2 412 aa24.38■■□□□ 1.49
CCDC47-204ENST00000582252 BEND6Q5SZJ8 279 aaPredicted RBP24.38■■□□□ 1.49
CCDC47-204ENST00000582252 HDXQ7Z353 690 aa24.38■■□□□ 1.49
CCDC47-204ENST00000582252 DAAM2Q86T65 1068 aa24.38■■□□□ 1.49
CCDC47-204ENST00000582252 EPS8L1Q8TE68 723 aa24.38■■□□□ 1.49
CCDC47-204ENST00000582252 SLC20A1Q8WUM9 679 aa24.38■■□□□ 1.49
CCDC47-204ENST00000582252 CGRRF1Q99675 332 aa24.38■■□□□ 1.49
CCDC47-204ENST00000582252 ISCUQ9H1K1 167 aa24.38■■□□□ 1.49
CCDC47-204ENST00000582252 ERAP1Q9NZ08 941 aa24.38■■□□□ 1.49
CCDC47-204ENST00000582252 AMFRQ9UKV5 643 aa24.38■■□□□ 1.49
CCDC47-204ENST00000582252 CLDN3O15551 220 aa24.37■■□□□ 1.49
CCDC47-204ENST00000582252 ASAP2O43150 1006 aa24.37■■□□□ 1.49
CCDC47-204ENST00000582252 ABCB4P21439 1286 aa24.37■■□□□ 1.49
CCDC47-204ENST00000582252 PIK3CAP42336 1068 aa24.37■■□□□ 1.49
CCDC47-204ENST00000582252 HADHBP55084 474 aaKnown RBP24.37■■□□□ 1.49
CCDC47-204ENST00000582252 LAMTOR4Q0VGL1 99 aa24.37■■□□□ 1.49
CCDC47-204ENST00000582252 MAPK6Q16659 721 aa24.37■■□□□ 1.49
CCDC47-204ENST00000582252 SLC35G2Q8TBE7 412 aa24.37■■□□□ 1.49
CCDC47-204ENST00000582252 KAT5Q92993 513 aa24.37■■□□□ 1.49
CCDC47-204ENST00000582252 SUGCTQ9HAC7 445 aa24.37■■□□□ 1.49
CCDC47-204ENST00000582252 SAGE1Q9NXZ1 904 aa24.37■■□□□ 1.49
CCDC47-204ENST00000582252 TOM1L1O75674 476 aa24.36■■□□□ 1.49
CCDC47-204ENST00000582252 SGPL1O95470 568 aa24.36■■□□□ 1.49
CCDC47-204ENST00000582252 GH1P01241 217 aa24.36■■□□□ 1.49
CCDC47-204ENST00000582252 ACOT2P49753 483 aa24.36■■□□□ 1.49
CCDC47-204ENST00000582252 TCEAL1Q15170 157 aa24.36■■□□□ 1.49
CCDC47-204ENST00000582252 CRELD2Q6UXH1 353 aaPredicted RBP24.36■■□□□ 1.49
CCDC47-204ENST00000582252 TRIM50Q86XT4 487 aa24.36■■□□□ 1.49
CCDC47-204ENST00000582252 ABCB6Q9NP58 842 aa24.36■■□□□ 1.49
CCDC47-204ENST00000582252 RNF216Q9NWF9 866 aaPredicted RBP24.36■■□□□ 1.49
CCDC47-204ENST00000582252 FLRT1Q9NZU1 646 aa24.36■■□□□ 1.49
CCDC47-204ENST00000582252 NOCTQ9UK39 431 aaKnown RBP24.36■■□□□ 1.49
CCDC47-204ENST00000582252 ZHX1Q9UKY1 873 aaPredicted RBP24.36■■□□□ 1.49
CCDC47-204ENST00000582252 KCNK3O14649 394 aa24.35■■□□□ 1.49
CCDC47-204ENST00000582252 CYP26A1O43174 497 aa24.35■■□□□ 1.49
CCDC47-204ENST00000582252 C4BPAP04003 597 aaKnown RBP24.35■■□□□ 1.49
CCDC47-204ENST00000582252 PRKCBP05771 671 aa24.35■■□□□ 1.49
CCDC47-204ENST00000582252 BPIFB4P59827 614 aa24.35■■□□□ 1.49
CCDC47-204ENST00000582252 BIRC3Q13489 604 aa24.35■■□□□ 1.49
CCDC47-204ENST00000582252 SURF1Q15526 300 aa24.35■■□□□ 1.49
CCDC47-204ENST00000582252 ZNF484Q5JVG2 852 aa24.35■■□□□ 1.49
CCDC47-204ENST00000582252 DHX38Q92620 1227 aaKnown RBP24.35■■□□□ 1.49
CCDC47-204ENST00000582252 ZBTB45Q96K62 511 aaPredicted RBP24.35■■□□□ 1.49
CCDC47-204ENST00000582252 FUT8Q9BYC5 575 aa24.35■■□□□ 1.49
CCDC47-204ENST00000582252 CCDC113Q9H0I3 377 aa24.35■■□□□ 1.49
CCDC47-204ENST00000582252 ZBTB42B2RXF5 422 aa24.35■■□□□ 1.49
CCDC47-204ENST00000582252 FTLP02792 175 aaPredicted RBP24.35■■□□□ 1.49
CCDC47-204ENST00000582252 ADCYAP1R1P41586 468 aa24.35■■□□□ 1.49
CCDC47-204ENST00000582252 DNA2P51530 1060 aa24.35■■□□□ 1.49
CCDC47-204ENST00000582252 GPC5P78333 572 aa24.35■■□□□ 1.49
CCDC47-204ENST00000582252 CDR2Q01850 454 aa24.35■■□□□ 1.49
CCDC47-204ENST00000582252 GPS2Q13227 327 aa24.35■■□□□ 1.49
CCDC47-204ENST00000582252 CCL14Q16627 93 aa24.35■■□□□ 1.49
CCDC47-204ENST00000582252 IQSEC1Q6DN90 963 aa24.35■■□□□ 1.49
CCDC47-204ENST00000582252 NOP9Q86U38 636 aaKnown RBP24.35■■□□□ 1.49
CCDC47-204ENST00000582252 DNAAF5Q86Y56 855 aa24.35■■□□□ 1.49
CCDC47-204ENST00000582252 RNF149Q8NC42 400 aa24.35■■□□□ 1.49
CCDC47-204ENST00000582252 ZNF516Q92618 1163 aa24.35■■□□□ 1.49
CCDC47-204ENST00000582252 COPS5Q92905 334 aa24.35■■□□□ 1.49
CCDC47-204ENST00000582252 PDE11AQ9HCR9 933 aa24.35■■□□□ 1.49
CCDC47-204ENST00000582252 PACSIN2Q9UNF0 486 aaPredicted RBP24.35■■□□□ 1.49
CCDC47-204ENST00000582252 MSCO60682 206 aa24.34■■□□□ 1.49
CCDC47-204ENST00000582252 IGHA2P01877 340 aa24.34■■□□□ 1.49
CCDC47-204ENST00000582252 HLA-DRAP01903 254 aa24.34■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms