RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 TNFAIP8L3Q5GJ75 292 aa9.58□□□□□ -0.88
NCBP3-204ENST00000574911 C6orf118Q5T5N4 469 aa9.58□□□□□ -0.88
NCBP3-204ENST00000574911 NSMFQ6X4W1 530 aa9.58□□□□□ -0.88
NCBP3-204ENST00000574911 C15orf39Q6ZRI6 1047 aa9.58□□□□□ -0.88
NCBP3-204ENST00000574911 ARMC9Q7Z3E5 817 aa9.58□□□□□ -0.88
NCBP3-204ENST00000574911 CROCCP2Q86T23 111 aa9.58□□□□□ -0.88
NCBP3-204ENST00000574911 USP37Q86T82 979 aa9.58□□□□□ -0.88
NCBP3-204ENST00000574911 CCDC105Q8IYK2 499 aa9.58□□□□□ -0.88
NCBP3-204ENST00000574911 MDM1Q8TC05 714 aa9.58□□□□□ -0.88
NCBP3-204ENST00000574911 POMGNT1Q8WZA1 660 aa9.58□□□□□ -0.88
NCBP3-204ENST00000574911 GPRASP2Q96D09 838 aa9.58□□□□□ -0.88
NCBP3-204ENST00000574911 SEC16BQ96JE7 1060 aa9.58□□□□□ -0.88
NCBP3-204ENST00000574911 CEP170P1Q96L14 293 aa9.58□□□□□ -0.88
NCBP3-204ENST00000574911 XPO6Q96QU8 1125 aaKnown RBP9.58□□□□□ -0.88
NCBP3-204ENST00000574911 ADAM7Q9H2U9 754 aa9.58□□□□□ -0.88
NCBP3-204ENST00000574911 AZI2Q9H6S1 392 aa9.58□□□□□ -0.88
NCBP3-204ENST00000574911 RPAP3Q9H6T3 665 aaPredicted RBP9.58□□□□□ -0.88
NCBP3-204ENST00000574911 STK32BQ9NY57 414 aa9.58□□□□□ -0.88
NCBP3-204ENST00000574911 GABBR1Q9UBS5 961 aa9.58□□□□□ -0.88
NCBP3-204ENST00000574911 SCAF8Q9UPN6 1271 aaKnown RBP9.58□□□□□ -0.88
NCBP3-204ENST00000574911 ADGRA3Q8IWK6 1321 aa9.58□□□□□ -0.88
NCBP3-204ENST00000574911 PASKQ96RG2 1323 aa9.58□□□□□ -0.88
NCBP3-204ENST00000574911 VWA5AO00534 786 aa9.58□□□□□ -0.88
NCBP3-204ENST00000574911 RIPK2O43353 540 aa9.58□□□□□ -0.88
NCBP3-204ENST00000574911 CTNND1O60716 968 aaKnown RBP9.58□□□□□ -0.88
NCBP3-204ENST00000574911 FDX1P10109 184 aa9.58□□□□□ -0.88
NCBP3-204ENST00000574911 KCNJ1P48048 391 aa9.58□□□□□ -0.88
NCBP3-204ENST00000574911 CDR1P51861 262 aa9.58□□□□□ -0.88
NCBP3-204ENST00000574911 ACTN3Q08043 901 aaPredicted RBP9.58□□□□□ -0.88
NCBP3-204ENST00000574911 ADCY2Q08462 1091 aa9.58□□□□□ -0.88
NCBP3-204ENST00000574911 BAATQ14032 418 aaPredicted RBP9.58□□□□□ -0.88
NCBP3-204ENST00000574911 RNF187Q5TA31 235 aaPredicted RBP9.58□□□□□ -0.88
NCBP3-204ENST00000574911 FBXW10Q5XX13 1052 aa9.58□□□□□ -0.88
NCBP3-204ENST00000574911 MMS22LQ6ZRQ5 1243 aa9.58□□□□□ -0.88
NCBP3-204ENST00000574911 NLRX1Q86UT6 975 aa9.58□□□□□ -0.88
NCBP3-204ENST00000574911 SUGP1Q8IWZ8 645 aaKnown RBP9.58□□□□□ -0.88
NCBP3-204ENST00000574911 BBXQ8WY36 941 aaPredicted RBP9.58□□□□□ -0.88
NCBP3-204ENST00000574911 ELMO3Q96BJ8 720 aa9.58□□□□□ -0.88
NCBP3-204ENST00000574911 FAM81BQ96LP2 452 aa9.58□□□□□ -0.88
NCBP3-204ENST00000574911 TAOK3Q9H2K8 898 aa9.58□□□□□ -0.88
NCBP3-204ENST00000574911 AVENQ9NQS1 362 aaPredicted RBP9.58□□□□□ -0.88
NCBP3-204ENST00000574911 CTDP1Q9Y5B0 961 aaPredicted RBP9.58□□□□□ -0.88
NCBP3-204ENST00000574911 MAFGO15525 162 aa9.57□□□□□ -0.88
NCBP3-204ENST00000574911 CLDN3O15551 220 aa9.57□□□□□ -0.88
NCBP3-204ENST00000574911 ECEL1O95672 775 aa9.57□□□□□ -0.88
NCBP3-204ENST00000574911 AGTP01019 485 aa9.57□□□□□ -0.88
NCBP3-204ENST00000574911 KCNA2P16389 499 aa9.57□□□□□ -0.88
NCBP3-204ENST00000574911 DPEP1P16444 411 aa9.57□□□□□ -0.88
NCBP3-204ENST00000574911 MTMR2Q13614 643 aa9.57□□□□□ -0.88
NCBP3-204ENST00000574911 BRDTQ58F21 947 aaPredicted RBP9.57□□□□□ -0.88
NCBP3-204ENST00000574911 ZNF772Q68DY9 489 aaPredicted RBP9.57□□□□□ -0.88
NCBP3-204ENST00000574911 TAS1R3Q7RTX0 852 aa9.57□□□□□ -0.88
NCBP3-204ENST00000574911 MCOLN2Q8IZK6 566 aa9.57□□□□□ -0.88
NCBP3-204ENST00000574911 ATXN2LQ8WWM7 1075 aaKnown RBP9.57□□□□□ -0.88
NCBP3-204ENST00000574911 ZNF516Q92618 1163 aa9.57□□□□□ -0.88
NCBP3-204ENST00000574911 WNK4Q96J92 1243 aa9.57□□□□□ -0.88
NCBP3-204ENST00000574911 XPNPEP1Q9NQW7 623 aa9.57□□□□□ -0.88
NCBP3-204ENST00000574911 PTPN22Q9Y2R2 807 aa9.57□□□□□ -0.88
NCBP3-204ENST00000574911 RIPK3Q9Y572 518 aa9.57□□□□□ -0.88
NCBP3-204ENST00000574911 RGS16O15492 202 aaPredicted RBP9.57□□□□□ -0.88
NCBP3-204ENST00000574911 DKC1O60832 514 aaKnown RBP eCLIP9.57□□□□□ -0.887e-13■■■■■ 37.1
NCBP3-204ENST00000574911 DGAT1O75907 488 aa9.57□□□□□ -0.88
NCBP3-204ENST00000574911 CALCAP01258 141 aa9.57□□□□□ -0.88
NCBP3-204ENST00000574911 NR3C2P08235 984 aa9.57□□□□□ -0.88
NCBP3-204ENST00000574911 DLATP10515 647 aaKnown RBP9.57□□□□□ -0.88
NCBP3-204ENST00000574911 KRT5P13647 590 aa9.57□□□□□ -0.88
NCBP3-204ENST00000574911 CHN1P15882 459 aa9.57□□□□□ -0.88
NCBP3-204ENST00000574911 FGFR4P22455 802 aa9.57□□□□□ -0.88
NCBP3-204ENST00000574911 HNRNPH1P31943 449 aaKnown RBP9.57□□□□□ -0.88
NCBP3-204ENST00000574911 CLDN10P78369 228 aa9.57□□□□□ -0.88
NCBP3-204ENST00000574911 IFI35P80217 286 aaPredicted RBP9.57□□□□□ -0.88
NCBP3-204ENST00000574911 PLCB4Q15147 1175 aa9.57□□□□□ -0.88
NCBP3-204ENST00000574911 ZNF677Q86XU0 584 aa9.57□□□□□ -0.88
NCBP3-204ENST00000574911 MCPH1Q8NEM0 835 aa9.57□□□□□ -0.88
NCBP3-204ENST00000574911 REPS2Q8NFH8 660 aa9.57□□□□□ -0.88
NCBP3-204ENST00000574911 ATP6V0A1Q93050 837 aa9.57□□□□□ -0.88
NCBP3-204ENST00000574911 ATG4CQ96DT6 458 aa9.57□□□□□ -0.88
NCBP3-204ENST00000574911 CHMP6Q96FZ7 201 aa9.57□□□□□ -0.88
NCBP3-204ENST00000574911 PI4K2AQ9BTU6 479 aa9.57□□□□□ -0.88
NCBP3-204ENST00000574911 RNF146Q9NTX7 359 aa9.57□□□□□ -0.88
NCBP3-204ENST00000574911 WHRNQ9P202 907 aa9.57□□□□□ -0.88
NCBP3-204ENST00000574911 MROH7Q68CQ1 1323 aa9.57□□□□□ -0.88
NCBP3-204ENST00000574911 MYPNQ86TC9 1320 aa9.57□□□□□ -0.88
NCBP3-204ENST00000574911 TLDC2A0PJX2 215 aa9.56□□□□□ -0.88
NCBP3-204ENST00000574911 TP73O15350 636 aa9.56□□□□□ -0.88
NCBP3-204ENST00000574911 EXTL3O43909 919 aa9.56□□□□□ -0.88
NCBP3-204ENST00000574911 PSAPP07602 524 aa9.56□□□□□ -0.88
NCBP3-204ENST00000574911 SCP2P22307 547 aa9.56□□□□□ -0.88
NCBP3-204ENST00000574911 MAPK4P31152 587 aa9.56□□□□□ -0.88
NCBP3-204ENST00000574911 KCNV1Q6PIU1 500 aa9.56□□□□□ -0.88
NCBP3-204ENST00000574911 RHBDF2Q6PJF5 856 aa9.56□□□□□ -0.88
NCBP3-204ENST00000574911 TRMT10CQ7L0Y3 403 aaKnown RBP9.56□□□□□ -0.88
NCBP3-204ENST00000574911 C1orf54Q8WWF1 131 aa9.56□□□□□ -0.88
NCBP3-204ENST00000574911 ZNF317Q96PQ6 595 aaPredicted RBP9.56□□□□□ -0.88
NCBP3-204ENST00000574911 FAM213AQ9BRX8 229 aa9.56□□□□□ -0.88
NCBP3-204ENST00000574911 ARHGAP28Q9P2N2 729 aa9.56□□□□□ -0.88
NCBP3-204ENST00000574911 ANAPC7Q9UJX3 599 aa9.56□□□□□ -0.88
NCBP3-204ENST00000574911 TELO2Q9Y4R8 837 aa9.56□□□□□ -0.88
NCBP3-204ENST00000574911 ZNFX1Q9P2E3 1918 aaKnown RBP9.56□□□□□ -0.88
NCBP3-204ENST00000574911 ARID2Q68CP9 1835 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms