RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 Q6ZRM9 215 aa5.44□□□□□ -1.54
NUP88-202ENST00000570937 DOK3Q7L591 496 aa5.44□□□□□ -1.54
NUP88-202ENST00000570937 GSPT2Q8IYD1 628 aaKnown RBP5.44□□□□□ -1.54
NUP88-202ENST00000570937 ELOA2Q8IYF1 753 aaPredicted RBP5.44□□□□□ -1.54
NUP88-202ENST00000570937 GLB1L3Q8NCI6 653 aaPredicted RBP5.44□□□□□ -1.54
NUP88-202ENST00000570937 CACTINQ8WUQ7 758 aaKnown RBP5.44□□□□□ -1.54
NUP88-202ENST00000570937 ST8SIA2Q92186 375 aa5.44□□□□□ -1.54
NUP88-202ENST00000570937 FATE1Q969F0 183 aa5.44□□□□□ -1.54
NUP88-202ENST00000570937 IFT122Q9HBG6 1241 aa5.44□□□□□ -1.54
NUP88-202ENST00000570937 CCM2LQ9NUG4 571 aaPredicted RBP5.44□□□□□ -1.54
NUP88-202ENST00000570937 SLC52A1Q9NWF4 448 aa5.44□□□□□ -1.54
NUP88-202ENST00000570937 CEP72Q9P209 647 aa5.44□□□□□ -1.54
NUP88-202ENST00000570937 NLRP1Q9C000 1473 aa5.44□□□□□ -1.54
NUP88-202ENST00000570937 XDHP47989 1333 aa5.44□□□□□ -1.54
NUP88-202ENST00000570937 WASHC2AQ641Q2 1341 aa5.44□□□□□ -1.54
NUP88-202ENST00000570937 ZC3H13Q5T200 1668 aaKnown RBP5.43□□□□□ -1.54
NUP88-202ENST00000570937 ABCC3O15438 1527 aa5.43□□□□□ -1.54
NUP88-202ENST00000570937 NUP155O75694 1391 aa5.43□□□□□ -1.54
NUP88-202ENST00000570937 TRIM75PA6NK02 468 aa5.43□□□□□ -1.54
NUP88-202ENST00000570937 AMHP03971 560 aa5.43□□□□□ -1.54
NUP88-202ENST00000570937 GNAT2P19087 354 aa5.43□□□□□ -1.54
NUP88-202ENST00000570937 TACR2P21452 398 aa5.43□□□□□ -1.54
NUP88-202ENST00000570937 CRHR1P34998 444 aa5.43□□□□□ -1.54
NUP88-202ENST00000570937 SCNN1GP51170 649 aa5.43□□□□□ -1.54
NUP88-202ENST00000570937 AMPD3Q01432 767 aa5.43□□□□□ -1.54
NUP88-202ENST00000570937 MST1LQ2TV78 715 aa5.43□□□□□ -1.54
NUP88-202ENST00000570937 INAVAQ3KP66 663 aa5.43□□□□□ -1.54
NUP88-202ENST00000570937 TOR2AQ5JU69 321 aa5.43□□□□□ -1.54
NUP88-202ENST00000570937 FAM83AQ86UY5 434 aa5.43□□□□□ -1.54
NUP88-202ENST00000570937 CNTD1Q8N815 330 aa5.43□□□□□ -1.54
NUP88-202ENST00000570937 ZNF480Q8WV37 535 aa5.43□□□□□ -1.54
NUP88-202ENST00000570937 GPR87Q9BY21 358 aa5.43□□□□□ -1.54
NUP88-202ENST00000570937 GPRC5DQ9NZD1 345 aa5.43□□□□□ -1.54
NUP88-202ENST00000570937 PRDM15P57071 1507 aaPredicted RBP5.43□□□□□ -1.54
NUP88-202ENST00000570937 GOLGA6L6A8MZA4 724 aa5.42□□□□□ -1.54
NUP88-202ENST00000570937 ITGA10O75578 1167 aa5.42□□□□□ -1.54
NUP88-202ENST00000570937 C1SP09871 688 aa5.42□□□□□ -1.54
NUP88-202ENST00000570937 C6P13671 934 aa5.42□□□□□ -1.54
NUP88-202ENST00000570937 SLC5A3P53794 718 aa5.42□□□□□ -1.54
NUP88-202ENST00000570937 SRSF2Q01130 221 aaKnown RBP5.42□□□□□ -1.54
NUP88-202ENST00000570937 CRHR2Q13324 411 aa5.42□□□□□ -1.54
NUP88-202ENST00000570937 FAM214AQ32MH5 1076 aa5.42□□□□□ -1.54
NUP88-202ENST00000570937 GPRIN1Q7Z2K8 1008 aa5.42□□□□□ -1.54
NUP88-202ENST00000570937 Q8N1X5 172 aa5.42□□□□□ -1.54
NUP88-202ENST00000570937 GPR156Q8NFN8 814 aa5.42□□□□□ -1.54
NUP88-202ENST00000570937 ATXN2LQ8WWM7 1075 aaKnown RBP5.42□□□□□ -1.54
NUP88-202ENST00000570937 SSH1Q8WYL5 1049 aa5.42□□□□□ -1.54
NUP88-202ENST00000570937 RIN2Q8WYP3 895 aaPredicted RBP5.42□□□□□ -1.54
NUP88-202ENST00000570937 MNTQ99583 582 aa5.42□□□□□ -1.54
NUP88-202ENST00000570937 TRIM8Q9BZR9 551 aa5.42□□□□□ -1.54
NUP88-202ENST00000570937 TMPRSS5Q9H3S3 457 aa5.42□□□□□ -1.54
NUP88-202ENST00000570937 GREM2Q9H772 168 aa5.42□□□□□ -1.54
NUP88-202ENST00000570937 ZNF277Q9NRM2 450 aaPredicted RBP5.42□□□□□ -1.54
NUP88-202ENST00000570937 DNAJC28Q9NX36 388 aa5.42□□□□□ -1.54
NUP88-202ENST00000570937 EID1Q9Y6B2 187 aa5.42□□□□□ -1.54
NUP88-202ENST00000570937 A2ML1A8K2U0 1454 aa5.42□□□□□ -1.54
NUP88-202ENST00000570937 RPRD2Q5VT52 1461 aaKnown RBP5.42□□□□□ -1.54
NUP88-202ENST00000570937 PLA2R1Q13018 1463 aa5.41□□□□□ -1.54
NUP88-202ENST00000570937 PEX11BO96011 259 aa5.41□□□□□ -1.54
NUP88-202ENST00000570937 CDK11BP21127 795 aaKnown RBP5.41□□□□□ -1.54
NUP88-202ENST00000570937 APBA1Q02410 837 aa5.41□□□□□ -1.54
NUP88-202ENST00000570937 PTH1RQ03431 593 aa5.41□□□□□ -1.54
NUP88-202ENST00000570937 MALLQ13021 153 aa5.41□□□□□ -1.54
NUP88-202ENST00000570937 CNGB1Q14028 1251 aaPredicted RBP5.41□□□□□ -1.54
NUP88-202ENST00000570937 MUM1L1Q5H9M0 696 aa5.41□□□□□ -1.54
NUP88-202ENST00000570937 MBNL2Q5VZF2 373 aaKnown RBP5.41□□□□□ -1.54
NUP88-202ENST00000570937 FAM180AQ6UWF9 173 aa5.41□□□□□ -1.54
NUP88-202ENST00000570937 PDZD4Q76G19 769 aaPredicted RBP5.41□□□□□ -1.54
NUP88-202ENST00000570937 CBARPQ8N350 705 aaPredicted RBP5.41□□□□□ -1.54
NUP88-202ENST00000570937 OR52N2Q8NGI0 321 aa5.41□□□□□ -1.54
NUP88-202ENST00000570937 CDC5LQ99459 802 aaKnown RBP5.41□□□□□ -1.54
NUP88-202ENST00000570937 LSM14BQ9BX40 385 aaKnown RBP5.41□□□□□ -1.54
NUP88-202ENST00000570937 ACE2Q9BYF1 805 aaPredicted RBP5.41□□□□□ -1.54
NUP88-202ENST00000570937 BCO1Q9HAY6 547 aa5.41□□□□□ -1.54
NUP88-202ENST00000570937 RBM12Q9NTZ6 932 aaKnown RBP5.41□□□□□ -1.54
NUP88-202ENST00000570937 PARPBPQ9NWS1 579 aa5.41□□□□□ -1.54
NUP88-202ENST00000570937 TRPS1Q9UHF7 1281 aa5.41□□□□□ -1.54
NUP88-202ENST00000570937 CLCA2Q9UQC9 943 aa5.41□□□□□ -1.54
NUP88-202ENST00000570937 LMTK2Q8IWU2 1503 aa5.41□□□□□ -1.54
NUP88-202ENST00000570937 CEP170BQ9Y4F5 1589 aaPredicted RBP5.41□□□□□ -1.54
NUP88-202ENST00000570937 DEPDC5O75140 1603 aa5.41□□□□□ -1.54
NUP88-202ENST00000570937 HFM1A2PYH4 1435 aa5.4□□□□□ -1.54
NUP88-202ENST00000570937 PTPRTO14522 1441 aa5.4□□□□□ -1.54
NUP88-202ENST00000570937 ERVK-7P63135 1459 aa5.4□□□□□ -1.54
NUP88-202ENST00000570937 FZD7O75084 574 aa5.4□□□□□ -1.54
NUP88-202ENST00000570937 AGXTP21549 392 aa5.4□□□□□ -1.54
NUP88-202ENST00000570937 CDKN1CP49918 316 aaPredicted RBP5.4□□□□□ -1.54
NUP88-202ENST00000570937 PPP3CAQ08209 521 aa5.4□□□□□ -1.54
NUP88-202ENST00000570937 TOB2Q14106 344 aaPredicted RBP5.4□□□□□ -1.54
NUP88-202ENST00000570937 Q6ZVL8 140 aa5.4□□□□□ -1.54
NUP88-202ENST00000570937 MB21D1Q8N884 522 aa5.4□□□□□ -1.54
NUP88-202ENST00000570937 OR7D4Q8NG98 312 aa5.4□□□□□ -1.54
NUP88-202ENST00000570937 HOXB13Q92826 284 aaPredicted RBP5.4□□□□□ -1.54
NUP88-202ENST00000570937 PLEKHG4BQ96PX9 1271 aa5.4□□□□□ -1.54
NUP88-202ENST00000570937 CPPED1Q9BRF8 314 aaPredicted RBP5.4□□□□□ -1.54
NUP88-202ENST00000570937 GPR45Q9Y5Y3 372 aa5.4□□□□□ -1.54
NUP88-202ENST00000570937 UGGT1Q9NYU2 1555 aa5.4□□□□□ -1.55
NUP88-202ENST00000570937 CAMSAP1Q5T5Y3 1602 aa5.4□□□□□ -1.55
NUP88-202ENST00000570937 MROH1Q8NDA8 1641 aa5.4□□□□□ -1.55
NUP88-202ENST00000570937 MYO3AQ8NEV4 1616 aa5.4□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms