RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-209	ENST00000569243	TAF7L	Q5H9L4	462 aa		4.85	□□□□□ -1.63
UBR1-209	ENST00000569243	FAM47A	Q5JRC9	791 aa		4.85	□□□□□ -1.63
UBR1-209	ENST00000569243	ABHD15	Q6UXT9	468 aa		4.85	□□□□□ -1.63
UBR1-209	ENST00000569243	SPATA3	Q8NHX4	192 aa		4.85	□□□□□ -1.63
UBR1-209	ENST00000569243	ZNF480	Q8WV37	535 aa		4.85	□□□□□ -1.63
UBR1-209	ENST00000569243	TFAP2C	Q92754	450 aa		4.85	□□□□□ -1.63
UBR1-209	ENST00000569243	KCTD10	Q9H3F6	313 aa		4.85	□□□□□ -1.63
UBR1-209	ENST00000569243	FPGT-TNNI3K	V9GXZ4	949 aa		4.85	□□□□□ -1.63
UBR1-209	ENST00000569243	ZMYM3	Q14202	1370 aa		4.85	□□□□□ -1.63
UBR1-209	ENST00000569243	ENPP3	O14638	875 aa		4.84	□□□□□ -1.63
UBR1-209	ENST00000569243	ULK1	O75385	1050 aa		4.84	□□□□□ -1.63
UBR1-209	ENST00000569243	SNRPA1	P09661	255 aa	Known RBP	4.84	□□□□□ -1.63
UBR1-209	ENST00000569243	DDX6	P26196	483 aa	Known RBP eCLIP	4.84	□□□□□ -1.63
UBR1-209	ENST00000569243	PTTG1IP	P53801	180 aa		4.84	□□□□□ -1.63
UBR1-209	ENST00000569243	LGALS4	P56470	323 aa		4.84	□□□□□ -1.63
UBR1-209	ENST00000569243	METRNL	Q641Q3	311 aa		4.84	□□□□□ -1.63
UBR1-209	ENST00000569243	FAM180A	Q6UWF9	173 aa		4.84	□□□□□ -1.63
UBR1-209	ENST00000569243	FUBP1	Q96AE4	644 aa	Known RBP	4.84	□□□□□ -1.63
UBR1-209	ENST00000569243	C1QTNF7	Q9BXJ2	289 aa		4.84	□□□□□ -1.63
UBR1-209	ENST00000569243	MS4A5	Q9H3V2	200 aa		4.84	□□□□□ -1.63
UBR1-209	ENST00000569243	BCO1	Q9HAY6	547 aa		4.84	□□□□□ -1.63
UBR1-209	ENST00000569243	POGK	Q9P215	609 aa		4.84	□□□□□ -1.63
UBR1-209	ENST00000569243	LCHN	A4D1U4	455 aa		4.83	□□□□□ -1.64
UBR1-209	ENST00000569243	CFI	P05156	583 aa		4.83	□□□□□ -1.64
UBR1-209	ENST00000569243	ENPP1	P22413	925 aa		4.83	□□□□□ -1.64
UBR1-209	ENST00000569243	SEC24C	P53992	1094 aa		4.83	□□□□□ -1.64
UBR1-209	ENST00000569243	MRPS9	P82933	396 aa	Known RBP	4.83	□□□□□ -1.64
UBR1-209	ENST00000569243	FAP	Q12884	760 aa		4.83	□□□□□ -1.64
UBR1-209	ENST00000569243	FOXI1	Q12951	378 aa		4.83	□□□□□ -1.64
UBR1-209	ENST00000569243	UGT8	Q16880	541 aa		4.83	□□□□□ -1.64
UBR1-209	ENST00000569243	MST1L	Q2TV78	715 aa		4.83	□□□□□ -1.64
UBR1-209	ENST00000569243	PDCD4	Q53EL6	469 aa	Known RBP	4.83	□□□□□ -1.64
UBR1-209	ENST00000569243	AGAP9	Q5VTM2	703 aa		4.83	□□□□□ -1.64
UBR1-209	ENST00000569243	ANKS6	Q68DC2	871 aa		4.83	□□□□□ -1.64
UBR1-209	ENST00000569243	ZNF572	Q7Z3I7	529 aa	Predicted RBP	4.83	□□□□□ -1.64
UBR1-209	ENST00000569243	CPEB3	Q8NE35	698 aa	Known RBP	4.83	□□□□□ -1.64
UBR1-209	ENST00000569243	PRDM12	Q9H4Q4	367 aa		4.83	□□□□□ -1.64
UBR1-209	ENST00000569243	IFT22	Q9H7X7	185 aa		4.83	□□□□□ -1.64
UBR1-209	ENST00000569243	MAST3	O60307	1309 aa		4.82	□□□□□ -1.64
UBR1-209	ENST00000569243	DRGX	A6NNA5	263 aa		4.82	□□□□□ -1.64
UBR1-209	ENST00000569243	PDE8A	O60658	829 aa		4.82	□□□□□ -1.64
UBR1-209	ENST00000569243	IGLV2-14	P01704	120 aa		4.82	□□□□□ -1.64
UBR1-209	ENST00000569243	EGR2	P11161	476 aa	Predicted RBP	4.82	□□□□□ -1.64
UBR1-209	ENST00000569243	MTHFD2	P13995	350 aa		4.82	□□□□□ -1.64
UBR1-209	ENST00000569243	CLRN1	P58418	232 aa		4.82	□□□□□ -1.64
UBR1-209	ENST00000569243	PDCD1	Q15116	288 aa		4.82	□□□□□ -1.64
UBR1-209	ENST00000569243	ANO4	Q32M45	955 aa		4.82	□□□□□ -1.64
UBR1-209	ENST00000569243	RRP12	Q5JTH9	1297 aa	Known RBP	4.82	□□□□□ -1.64
UBR1-209	ENST00000569243	MFSD14B	Q5SR56	506 aa		4.82	□□□□□ -1.64
UBR1-209	ENST00000569243	RHOT2	Q8IXI1	618 aa		4.82	□□□□□ -1.64
UBR1-209	ENST00000569243	GPR156	Q8NFN8	814 aa		4.82	□□□□□ -1.64
UBR1-209	ENST00000569243	OR7D4	Q8NG98	312 aa		4.82	□□□□□ -1.64
UBR1-209	ENST00000569243	MDM1	Q8TC05	714 aa		4.82	□□□□□ -1.64
UBR1-209	ENST00000569243	ZNF384	Q8TF68	577 aa		4.82	□□□□□ -1.64
UBR1-209	ENST00000569243	LEO1	Q8WVC0	666 aa	Predicted RBP	4.82	□□□□□ -1.64
UBR1-209	ENST00000569243	USP7	Q93009	1102 aa		4.82	□□□□□ -1.64
UBR1-209	ENST00000569243	TTC1	Q99614	292 aa		4.82	□□□□□ -1.64
UBR1-209	ENST00000569243	ATP11B	Q9Y2G3	1177 aa		4.82	□□□□□ -1.64
UBR1-209	ENST00000569243	MRPL42	Q9Y6G3	142 aa	Known RBP	4.82	□□□□□ -1.64
UBR1-209	ENST00000569243	CYSRT1	A8MQ03	144 aa		4.81	□□□□□ -1.64
UBR1-209	ENST00000569243	MATN4	O95460	622 aa		4.81	□□□□□ -1.64
UBR1-209	ENST00000569243	ESRRB	O95718	433 aa		4.81	□□□□□ -1.64
UBR1-209	ENST00000569243	SP140	Q13342	867 aa		4.81	□□□□□ -1.64
UBR1-209	ENST00000569243	CT83	Q5H943	113 aa		4.81	□□□□□ -1.64
UBR1-209	ENST00000569243	PRAMEF14	Q5SWL7	426 aa		4.81	□□□□□ -1.64
UBR1-209	ENST00000569243	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	4.81	□□□□□ -1.64
UBR1-209	ENST00000569243	DDX46	Q7L014	1031 aa	Known RBP	4.81	□□□□□ -1.64
UBR1-209	ENST00000569243	FATE1	Q969F0	183 aa		4.81	□□□□□ -1.64
UBR1-209	ENST00000569243	EAF2	Q96CJ1	260 aa	Predicted RBP	4.81	□□□□□ -1.64
UBR1-209	ENST00000569243	CEP95	Q96GE4	821 aa		4.81	□□□□□ -1.64
UBR1-209	ENST00000569243	BOD1	Q96IK1	185 aa		4.81	□□□□□ -1.64
UBR1-209	ENST00000569243	ORAI2	Q96SN7	254 aa		4.81	□□□□□ -1.64
UBR1-209	ENST00000569243	ADAM2	Q99965	735 aa		4.81	□□□□□ -1.64
UBR1-209	ENST00000569243	TOPORS	Q9NS56	1045 aa	Predicted RBP	4.81	□□□□□ -1.64
UBR1-209	ENST00000569243	TMEM74B	Q9NUR3	256 aa		4.81	□□□□□ -1.64
UBR1-209	ENST00000569243	APOBEC2	Q9Y235	224 aa	Known RBP	4.81	□□□□□ -1.64
UBR1-209	ENST00000569243	ATRNL1	Q5VV63	1379 aa		4.8	□□□□□ -1.64
UBR1-209	ENST00000569243	CNTNAP2	Q9UHC6	1331 aa		4.8	□□□□□ -1.64
UBR1-209	ENST00000569243	CDKL5	O76039	1030 aa		4.8	□□□□□ -1.64
UBR1-209	ENST00000569243	FOS	P01100	380 aa	Predicted RBP	4.8	□□□□□ -1.64
UBR1-209	ENST00000569243	LPL	P06858	475 aa		4.8	□□□□□ -1.64
UBR1-209	ENST00000569243	MYCLP1	P12525	358 aa	Predicted RBP	4.8	□□□□□ -1.64
UBR1-209	ENST00000569243	ALOX15	P16050	662 aa	Predicted RBP	4.8	□□□□□ -1.64
UBR1-209	ENST00000569243	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	4.8	□□□□□ -1.64
UBR1-209	ENST00000569243	SPDYE7P	Q495Y7	208 aa		4.8	□□□□□ -1.64
UBR1-209	ENST00000569243	NOP9	Q86U38	636 aa	Known RBP	4.8	□□□□□ -1.64
UBR1-209	ENST00000569243	JAZF1	Q86VZ6	243 aa		4.8	□□□□□ -1.64
UBR1-209	ENST00000569243	DRC7	Q8IY82	874 aa		4.8	□□□□□ -1.64
UBR1-209	ENST00000569243	FAM43A	Q8N2R8	423 aa		4.8	□□□□□ -1.64
UBR1-209	ENST00000569243	CLRN3	Q8NCR9	226 aa		4.8	□□□□□ -1.64
UBR1-209	ENST00000569243	REXO4	Q9GZR2	422 aa	Known RBP	4.8	□□□□□ -1.64
UBR1-209	ENST00000569243	SCOC	Q9UIL1	159 aa		4.8	□□□□□ -1.64
UBR1-209	ENST00000569243	TLK1	Q9UKI8	766 aa		4.8	□□□□□ -1.64
UBR1-209	ENST00000569243	USP15	Q9Y4E8	981 aa	Predicted RBP	4.8	□□□□□ -1.64
UBR1-209	ENST00000569243	CXorf49	A8MYA2	514 aa	Predicted RBP	4.79	□□□□□ -1.64
UBR1-209	ENST00000569243	NEMP1	O14524	444 aa		4.79	□□□□□ -1.64
UBR1-209	ENST00000569243	AKR1B10	O60218	316 aa		4.79	□□□□□ -1.64
UBR1-209	ENST00000569243	BRINP1	O60477	761 aa		4.79	□□□□□ -1.64
UBR1-209	ENST00000569243	SPDEF	O95238	335 aa		4.79	□□□□□ -1.64
UBR1-209	ENST00000569243	IL2RB	P14784	551 aa		4.79	□□□□□ -1.64

Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms