RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 NLRC5Q86WI3 1866 aa17.41■□□□□ 0.38
RAB40C-208ENST00000564703 RALGAPA2Q2PPJ7 1873 aa17.4■□□□□ 0.38
RAB40C-208ENST00000564703 SMIM28A0A1B0GU29 152 aa17.4■□□□□ 0.38
RAB40C-208ENST00000564703 EPOPA6NHQ4 379 aa17.4■□□□□ 0.38
RAB40C-208ENST00000564703 TISP43B9A030 160 aa17.4■□□□□ 0.38
RAB40C-208ENST00000564703 NT5C1B-RDH14C9J2C7 533 aa17.4■□□□□ 0.38
RAB40C-208ENST00000564703 POU5F1Q01860 360 aaKnown RBP17.4■□□□□ 0.38
RAB40C-208ENST00000564703 UBE3AQ05086 875 aa17.4■□□□□ 0.38
RAB40C-208ENST00000564703 PPP2R3AQ06190 1150 aa17.4■□□□□ 0.38
RAB40C-208ENST00000564703 SLC10A6Q3KNW5 377 aa17.4■□□□□ 0.38
RAB40C-208ENST00000564703 ALKAL1Q6UXT8 129 aa17.4■□□□□ 0.38
RAB40C-208ENST00000564703 COLGALT2Q8IYK4 626 aa17.4■□□□□ 0.38
RAB40C-208ENST00000564703 TSPAN18Q96SJ8 248 aa17.4■□□□□ 0.38
RAB40C-208ENST00000564703 FAM213AQ9BRX8 229 aa17.4■□□□□ 0.38
RAB40C-208ENST00000564703 LMAN2LQ9H0V9 348 aa17.4■□□□□ 0.38
RAB40C-208ENST00000564703 IKZF4Q9H2S9 585 aa17.4■□□□□ 0.38
RAB40C-208ENST00000564703 PCIF1Q9H4Z3 704 aa17.4■□□□□ 0.38
RAB40C-208ENST00000564703 KIAA1586Q9HCI6 787 aa17.4■□□□□ 0.38
RAB40C-208ENST00000564703 DNAJB4Q9UDY4 337 aa17.4■□□□□ 0.38
RAB40C-208ENST00000564703 TDRD15B5MCY1 1934 aaKnown RBP17.39■□□□□ 0.37
RAB40C-208ENST00000564703 NRP1O14786 923 aa17.39■□□□□ 0.37
RAB40C-208ENST00000564703 XPOTO43592 962 aaKnown RBP17.39■□□□□ 0.37
RAB40C-208ENST00000564703 ITGB1P05556 798 aa17.39■□□□□ 0.37
RAB40C-208ENST00000564703 CXCL8P10145 99 aa17.39■□□□□ 0.37
RAB40C-208ENST00000564703 ADSSP30520 456 aa17.39■□□□□ 0.37
RAB40C-208ENST00000564703 PBX3P40426 434 aa17.39■□□□□ 0.37
RAB40C-208ENST00000564703 TNFSF9P41273 254 aa17.39■□□□□ 0.37
RAB40C-208ENST00000564703 SLC11A1P49279 550 aa17.39■□□□□ 0.37
RAB40C-208ENST00000564703 PLCB3Q01970 1234 aa17.39■□□□□ 0.37
RAB40C-208ENST00000564703 BMT2Q1RMZ1 405 aa17.39■□□□□ 0.37
RAB40C-208ENST00000564703 SLC39A11Q8N1S5 342 aa17.39■□□□□ 0.37
RAB40C-208ENST00000564703 SPPL3Q8TCT6 385 aa17.39■□□□□ 0.37
RAB40C-208ENST00000564703 SNX27Q96L92 541 aa17.39■□□□□ 0.37
RAB40C-208ENST00000564703 LMBRD1Q9NUN5 540 aa17.39■□□□□ 0.37
RAB40C-208ENST00000564703 STK39Q9UEW8 545 aa17.39■□□□□ 0.37
RAB40C-208ENST00000564703 CPSF3Q9UKF6 684 aaKnown RBP17.39■□□□□ 0.37
RAB40C-208ENST00000564703 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.39■□□□□ 0.37
RAB40C-208ENST00000564703 CITO14578 2027 aa17.38■□□□□ 0.37
RAB40C-208ENST00000564703 LACTBL1A8MY62 500 aa17.38■□□□□ 0.37
RAB40C-208ENST00000564703 PTGESO14684 152 aa17.38■□□□□ 0.37
RAB40C-208ENST00000564703 GRM6O15303 877 aa17.38■□□□□ 0.37
RAB40C-208ENST00000564703 CALUO43852 315 aaPredicted RBP17.38■□□□□ 0.37
RAB40C-208ENST00000564703 EXTL3O43909 919 aa17.38■□□□□ 0.37
RAB40C-208ENST00000564703 LPXNO60711 386 aa17.38■□□□□ 0.37
RAB40C-208ENST00000564703 TADA2AO75478 443 aa17.38■□□□□ 0.37
RAB40C-208ENST00000564703 KCNE1P15382 129 aa17.38■□□□□ 0.37
RAB40C-208ENST00000564703 POU3F3P20264 500 aaPredicted RBP17.38■□□□□ 0.37
RAB40C-208ENST00000564703 HOXD13P35453 343 aa17.38■□□□□ 0.37
RAB40C-208ENST00000564703 DSC1Q08554 894 aa17.38■□□□□ 0.37
RAB40C-208ENST00000564703 CAMK4Q16566 473 aa17.38■□□□□ 0.37
RAB40C-208ENST00000564703 XKR4Q5GH76 650 aa17.38■□□□□ 0.37
RAB40C-208ENST00000564703 GLRA4Q5JXX5 417 aa17.38■□□□□ 0.37
RAB40C-208ENST00000564703 ZNF658Q5TYW1 1059 aaPredicted RBP17.38■□□□□ 0.37
RAB40C-208ENST00000564703 GPD1LQ8N335 351 aa17.38■□□□□ 0.37
RAB40C-208ENST00000564703 KIAA0895Q8NCT3 520 aa17.38■□□□□ 0.37
RAB40C-208ENST00000564703 POF1BQ8WVV4 589 aa17.38■□□□□ 0.37
RAB40C-208ENST00000564703 ERCC4Q92889 916 aaPredicted RBP17.38■□□□□ 0.37
RAB40C-208ENST00000564703 MRPL38Q96DV4 380 aaKnown RBP17.38■□□□□ 0.37
RAB40C-208ENST00000564703 SAAL1Q96ER3 474 aa17.38■□□□□ 0.37
RAB40C-208ENST00000564703 KIF12Q96FN5 646 aa17.38■□□□□ 0.37
RAB40C-208ENST00000564703 DDX27Q96GQ7 796 aaKnown RBP17.38■□□□□ 0.37
RAB40C-208ENST00000564703 IGSF21Q96ID5 467 aa17.38■□□□□ 0.37
RAB40C-208ENST00000564703 UROC1Q96N76 676 aa17.38■□□□□ 0.37
RAB40C-208ENST00000564703 CBWD1Q9BRT8 395 aa17.38■□□□□ 0.37
RAB40C-208ENST00000564703 ASB7Q9H672 318 aa17.38■□□□□ 0.37
RAB40C-208ENST00000564703 CNTN3Q9P232 1028 aa17.38■□□□□ 0.37
RAB40C-208ENST00000564703 MAPK8IP1Q9UQF2 711 aa17.38■□□□□ 0.37
RAB40C-208ENST00000564703 LZTS1Q9Y250 596 aa17.38■□□□□ 0.37
RAB40C-208ENST00000564703 PRG3Q9Y2Y8 225 aaPredicted RBP17.38■□□□□ 0.37
RAB40C-208ENST00000564703 TRIP11Q15643 1979 aa17.37■□□□□ 0.37
RAB40C-208ENST00000564703 TTC26A0AVF1 554 aa17.37■□□□□ 0.37
RAB40C-208ENST00000564703 GOLGA8IPA6NC78 632 aa17.37■□□□□ 0.37
RAB40C-208ENST00000564703 ZNF233A6NK53 670 aa17.37■□□□□ 0.37
RAB40C-208ENST00000564703 GOLGA8JA6NMD2 632 aa17.37■□□□□ 0.37
RAB40C-208ENST00000564703 PDXKO00764 312 aa17.37■□□□□ 0.37
RAB40C-208ENST00000564703 CLIC2O15247 247 aa17.37■□□□□ 0.37
RAB40C-208ENST00000564703 TGFB1I1O43294 461 aa17.37■□□□□ 0.37
RAB40C-208ENST00000564703 IL18RAPO95256 599 aa17.37■□□□□ 0.37
RAB40C-208ENST00000564703 STIM1Q13586 685 aa17.37■□□□□ 0.37
RAB40C-208ENST00000564703 ADGRE1Q14246 886 aa17.37■□□□□ 0.37
RAB40C-208ENST00000564703 ENOX2Q16206 610 aaKnown RBP17.37■□□□□ 0.37
RAB40C-208ENST00000564703 ZBTB41Q5SVQ8 909 aa17.37■□□□□ 0.37
RAB40C-208ENST00000564703 PDE12Q6L8Q7 609 aaKnown RBP17.37■□□□□ 0.37
RAB40C-208ENST00000564703 TMC7Q7Z402 723 aa17.37■□□□□ 0.37
RAB40C-208ENST00000564703 MICALL1Q8N3F8 863 aa17.37■□□□□ 0.37
RAB40C-208ENST00000564703 GUF1Q8N442 669 aaKnown RBP17.37■□□□□ 0.37
RAB40C-208ENST00000564703 SPATA20Q8TB22 786 aa17.37■□□□□ 0.37
RAB40C-208ENST00000564703 PPP2R3CQ969Q6 453 aa17.37■□□□□ 0.37
RAB40C-208ENST00000564703 PPP1R10Q96QC0 940 aaKnown RBP17.37■□□□□ 0.37
RAB40C-208ENST00000564703 AGPAT3Q9NRZ7 376 aa17.37■□□□□ 0.37
RAB40C-208ENST00000564703 HSPBP1Q9NZL4 362 aa17.37■□□□□ 0.37
RAB40C-208ENST00000564703 STXBP5LQ9Y2K9 1186 aa17.37■□□□□ 0.37
RAB40C-208ENST00000564703 MTCH2Q9Y6C9 303 aa17.37■□□□□ 0.37
RAB40C-208ENST00000564703 LAMA2P24043 3122 aaKnown RBP17.37■□□□□ 0.37
RAB40C-208ENST00000564703 CASTOR2A6NHX0 329 aa17.36■□□□□ 0.37
RAB40C-208ENST00000564703 FAM189A1O60320 539 aa17.36■□□□□ 0.37
RAB40C-208ENST00000564703 EXOC3O60645 756 aa17.36■□□□□ 0.37
RAB40C-208ENST00000564703 RPL9P32969 192 aaKnown RBP17.36■□□□□ 0.37
RAB40C-208ENST00000564703 CYP2J2P51589 502 aa17.36■□□□□ 0.37
RAB40C-208ENST00000564703 ISM2Q6H9L7 571 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms