RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 SYF2O95926 243 aaKnown RBP10.54□□□□□ -0.72
SMG1-205ENST00000561947 PIK3CAP42336 1068 aa10.54□□□□□ -0.72
SMG1-205ENST00000561947 CARSP49589 748 aaKnown RBP10.54□□□□□ -0.72
SMG1-205ENST00000561947 HSDL1Q3SXM5 330 aa10.54□□□□□ -0.72
SMG1-205ENST00000561947 ZBTB41Q5SVQ8 909 aa10.54□□□□□ -0.72
SMG1-205ENST00000561947 IER5Q5VY09 327 aa10.54□□□□□ -0.72
SMG1-205ENST00000561947 PLPPR4Q7Z2D5 763 aa10.54□□□□□ -0.72
SMG1-205ENST00000561947 FBXO16Q8IX29 292 aaPredicted RBP10.54□□□□□ -0.72
SMG1-205ENST00000561947 MORC4Q8TE76 937 aa10.54□□□□□ -0.72
SMG1-205ENST00000561947 ATP8B4Q8TF62 1192 aa10.54□□□□□ -0.72
SMG1-205ENST00000561947 TCP11Q8WWU5 503 aa10.54□□□□□ -0.72
SMG1-205ENST00000561947 PRPF31Q8WWY3 499 aaKnown RBP10.54□□□□□ -0.72
SMG1-205ENST00000561947 CASKIN2Q8WXE0 1202 aa10.54□□□□□ -0.72
SMG1-205ENST00000561947 CGRRF1Q99675 332 aa10.54□□□□□ -0.72
SMG1-205ENST00000561947 CARD9Q9H257 536 aa10.54□□□□□ -0.72
SMG1-205ENST00000561947 VPS18Q9P253 973 aa10.54□□□□□ -0.72
SMG1-205ENST00000561947 FAN1Q9Y2M0 1017 aa10.54□□□□□ -0.72
SMG1-205ENST00000561947 ALG6Q9Y672 507 aa10.54□□□□□ -0.72
SMG1-205ENST00000561947 SCN4AP35499 1836 aa10.54□□□□□ -0.72
SMG1-205ENST00000561947 ESYT3A0FGR9 886 aa10.54□□□□□ -0.72
SMG1-205ENST00000561947 MIF4GDA9UHW6 222 aaKnown RBP10.54□□□□□ -0.72
SMG1-205ENST00000561947 CYP1A2P05177 515 aa10.54□□□□□ -0.72
SMG1-205ENST00000561947 MARK3P27448 753 aa10.54□□□□□ -0.72
SMG1-205ENST00000561947 GJA5P36382 358 aa10.54□□□□□ -0.72
SMG1-205ENST00000561947 EFNA5P52803 228 aa10.54□□□□□ -0.72
SMG1-205ENST00000561947 ERVK-9P63128 1117 aa10.54□□□□□ -0.72
SMG1-205ENST00000561947 BIRC3Q13489 604 aa10.54□□□□□ -0.72
SMG1-205ENST00000561947 WDR78Q5VTH9 848 aa10.54□□□□□ -0.72
SMG1-205ENST00000561947 ZPBP2Q6X784 338 aa10.54□□□□□ -0.72
SMG1-205ENST00000561947 TRIM50Q86XT4 487 aa10.54□□□□□ -0.72
SMG1-205ENST00000561947 SHCBP1Q8NEM2 672 aa10.54□□□□□ -0.72
SMG1-205ENST00000561947 CCDC113Q9H0I3 377 aa10.54□□□□□ -0.72
SMG1-205ENST00000561947 PLEKHA4Q9H4M7 779 aa10.54□□□□□ -0.72
SMG1-205ENST00000561947 GTF3C4Q9UKN8 822 aa10.54□□□□□ -0.72
SMG1-205ENST00000561947 CNTNAP2Q9UHC6 1331 aa10.54□□□□□ -0.72
SMG1-205ENST00000561947 LOC102724159A0A0B4J2E5 919 aa10.53□□□□□ -0.72
SMG1-205ENST00000561947 ZBTB42B2RXF5 422 aa10.53□□□□□ -0.72
SMG1-205ENST00000561947 SART1O43290 800 aaKnown RBP10.53□□□□□ -0.72
SMG1-205ENST00000561947 ATMINO43313 823 aaPredicted RBP10.53□□□□□ -0.72
SMG1-205ENST00000561947 GRIN3BO60391 1043 aa10.53□□□□□ -0.72
SMG1-205ENST00000561947 VNN1O95497 513 aa10.53□□□□□ -0.72
SMG1-205ENST00000561947 ITGA4P13612 1032 aa10.53□□□□□ -0.72
SMG1-205ENST00000561947 GYS2P54840 703 aa10.53□□□□□ -0.72
SMG1-205ENST00000561947 PLCB4Q15147 1175 aa10.53□□□□□ -0.72
SMG1-205ENST00000561947 PWP2Q15269 919 aaKnown RBP10.53□□□□□ -0.72
SMG1-205ENST00000561947 CLEC16AQ2KHT3 1053 aa10.53□□□□□ -0.72
SMG1-205ENST00000561947 LDLRAD1Q5T700 205 aa10.53□□□□□ -0.72
SMG1-205ENST00000561947 CDCA2Q69YH5 1023 aaPredicted RBP10.53□□□□□ -0.72
SMG1-205ENST00000561947 ACAD10Q6JQN1 1059 aa10.53□□□□□ -0.72
SMG1-205ENST00000561947 CCDC62Q6P9F0 684 aa10.53□□□□□ -0.72
SMG1-205ENST00000561947 DHX37Q8IY37 1157 aaKnown RBP10.53□□□□□ -0.72
SMG1-205ENST00000561947 EXOC8Q8IYI6 725 aa10.53□□□□□ -0.72
SMG1-205ENST00000561947 IFT81Q8WYA0 676 aa10.53□□□□□ -0.72
SMG1-205ENST00000561947 ZNF653Q96CK0 615 aa10.53□□□□□ -0.72
SMG1-205ENST00000561947 RPS6KC1Q96S38 1066 aa10.53□□□□□ -0.72
SMG1-205ENST00000561947 MRPL4Q9BYD3 311 aaKnown RBP10.53□□□□□ -0.72
SMG1-205ENST00000561947 DDX47Q9H0S4 455 aaKnown RBP10.53□□□□□ -0.72
SMG1-205ENST00000561947 SLITRK6Q9H5Y7 841 aa10.53□□□□□ -0.72
SMG1-205ENST00000561947 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.53□□□□□ -0.72
SMG1-205ENST00000561947 PLXNA1Q9UIW2 1896 aa10.53□□□□□ -0.72
SMG1-205ENST00000561947 NFU1Q9UMS0 254 aa10.53□□□□□ -0.72
SMG1-205ENST00000561947 IGKV6-21A0A0C4DH24 114 aa10.53□□□□□ -0.72
SMG1-205ENST00000561947 GOLGA6BA6NDN3 693 aa10.53□□□□□ -0.72
SMG1-205ENST00000561947 TMEM110-MUSTN1A8MSY1 372 aa10.53□□□□□ -0.72
SMG1-205ENST00000561947 BHMG1C9JSJ3 638 aaPredicted RBP10.53□□□□□ -0.72
SMG1-205ENST00000561947 AGPSO00116 658 aa10.53□□□□□ -0.72
SMG1-205ENST00000561947 FGGP02679 453 aa10.53□□□□□ -0.72
SMG1-205ENST00000561947 GGCXP38435 758 aa10.53□□□□□ -0.72
SMG1-205ENST00000561947 LAMTOR4Q0VGL1 99 aa10.53□□□□□ -0.72
SMG1-205ENST00000561947 MKRN4PQ13434 485 aaPredicted RBP10.53□□□□□ -0.72
SMG1-205ENST00000561947 SNAPC2Q13487 334 aa10.53□□□□□ -0.72
SMG1-205ENST00000561947 MXD4Q14582 209 aaPredicted RBP10.53□□□□□ -0.72
SMG1-205ENST00000561947 ZNF677Q86XU0 584 aa10.53□□□□□ -0.72
SMG1-205ENST00000561947 UBL4BQ8N7F7 174 aa10.53□□□□□ -0.72
SMG1-205ENST00000561947 EIF1ADQ8N9N8 165 aaKnown RBP10.53□□□□□ -0.72
SMG1-205ENST00000561947 ZNF564Q8TBZ8 553 aaPredicted RBP10.53□□□□□ -0.72
SMG1-205ENST00000561947 EXOC4Q96A65 974 aa10.53□□□□□ -0.72
SMG1-205ENST00000561947 RNPC3Q96LT9 517 aaKnown RBP10.53□□□□□ -0.72
SMG1-205ENST00000561947 SPATA33Q96N06 139 aa10.53□□□□□ -0.72
SMG1-205ENST00000561947 NAP1L3Q99457 506 aaPredicted RBP10.53□□□□□ -0.72
SMG1-205ENST00000561947 NUP85Q9BW27 656 aa10.53□□□□□ -0.72
SMG1-205ENST00000561947 UVRAGQ9P2Y5 699 aa10.53□□□□□ -0.72
SMG1-205ENST00000561947 ADAM21Q9UKJ8 722 aa10.53□□□□□ -0.72
SMG1-205ENST00000561947 PLXNB2O15031 1838 aa10.53□□□□□ -0.72
SMG1-205ENST00000561947 CLDN3O15551 220 aa10.52□□□□□ -0.72
SMG1-205ENST00000561947 MSCO60682 206 aa10.52□□□□□ -0.72
SMG1-205ENST00000561947 CLSTN1O94985 981 aa10.52□□□□□ -0.72
SMG1-205ENST00000561947 HARSP12081 509 aaKnown RBP10.52□□□□□ -0.72
SMG1-205ENST00000561947 CYP2C19P33261 490 aa10.52□□□□□ -0.72
SMG1-205ENST00000561947 MESDQ14696 234 aa10.52□□□□□ -0.72
SMG1-205ENST00000561947 CLUL1Q15846 466 aa10.52□□□□□ -0.72
SMG1-205ENST00000561947 SPOPLQ6IQ16 392 aa10.52□□□□□ -0.72
SMG1-205ENST00000561947 BRSK2Q8IWQ3 736 aa10.52□□□□□ -0.72
SMG1-205ENST00000561947 ZBTB8OSQ8IWT0 167 aa10.52□□□□□ -0.72
SMG1-205ENST00000561947 TSEN2Q8NCE0 465 aaKnown RBP10.52□□□□□ -0.72
SMG1-205ENST00000561947 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.52□□□□□ -0.72
SMG1-205ENST00000561947 ALG3Q92685 438 aa10.52□□□□□ -0.72
SMG1-205ENST00000561947 COPS5Q92905 334 aa10.52□□□□□ -0.72
SMG1-205ENST00000561947 ZSWIM1Q9BR11 485 aa10.52□□□□□ -0.72
SMG1-205ENST00000561947 CHORDC1Q9UHD1 332 aaPredicted RBP10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms