RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 APOL6Q9BWW8 343 aa10.5□□□□□ -0.73
RABGGTA-221ENST00000561055 KIAA1586Q9HCI6 787 aa10.5□□□□□ -0.73
RABGGTA-221ENST00000561055 DMAC2Q9NW81 257 aa10.5□□□□□ -0.73
RABGGTA-221ENST00000561055 MTMR10Q9NXD2 777 aa10.5□□□□□ -0.73
RABGGTA-221ENST00000561055 KIAA1468Q9P260 1216 aa10.5□□□□□ -0.73
RABGGTA-221ENST00000561055 TRAF3IP3Q9Y228 551 aa10.5□□□□□ -0.73
RABGGTA-221ENST00000561055 GDAQ9Y2T3 454 aa10.5□□□□□ -0.73
RABGGTA-221ENST00000561055 PCDHB12Q9Y5F1 795 aa10.5□□□□□ -0.73
RABGGTA-221ENST00000561055 CUL9Q8IWT3 2517 aa10.49□□□□□ -0.73
RABGGTA-221ENST00000561055 SMIM28A0A1B0GU29 152 aa10.49□□□□□ -0.73
RABGGTA-221ENST00000561055 LPXNO60711 386 aa10.49□□□□□ -0.73
RABGGTA-221ENST00000561055 EFEMP2O95967 443 aa10.49□□□□□ -0.73
RABGGTA-221ENST00000561055 POMCP01189 267 aa10.49□□□□□ -0.73
RABGGTA-221ENST00000561055 ALDH2P05091 517 aa10.49□□□□□ -0.73
RABGGTA-221ENST00000561055 GALTP07902 379 aa10.49□□□□□ -0.73
RABGGTA-221ENST00000561055 IBSPP21815 317 aaPredicted RBP10.49□□□□□ -0.73
RABGGTA-221ENST00000561055 MCM4P33991 863 aa10.49□□□□□ -0.73
RABGGTA-221ENST00000561055 PPM1AP35813 382 aa10.49□□□□□ -0.73
RABGGTA-221ENST00000561055 PPP1R2P41236 205 aa10.49□□□□□ -0.73
RABGGTA-221ENST00000561055 TNFSF9P41273 254 aa10.49□□□□□ -0.73
RABGGTA-221ENST00000561055 ALDH7A1P49419 539 aaKnown RBP10.49□□□□□ -0.73
RABGGTA-221ENST00000561055 SCNN1GP51170 649 aa10.49□□□□□ -0.73
RABGGTA-221ENST00000561055 BCAR1P56945 870 aa10.49□□□□□ -0.73
RABGGTA-221ENST00000561055 MCCD1P59942 119 aaPredicted RBP10.49□□□□□ -0.73
RABGGTA-221ENST00000561055 UBE3AQ05086 875 aa10.49□□□□□ -0.73
RABGGTA-221ENST00000561055 RNASELQ05823 741 aaKnown RBP10.49□□□□□ -0.73
RABGGTA-221ENST00000561055 TUSC3Q13454 348 aa10.49□□□□□ -0.73
RABGGTA-221ENST00000561055 MORC3Q14149 939 aa10.49□□□□□ -0.73
RABGGTA-221ENST00000561055 HSP90AA2PQ14568 343 aaPredicted RBP10.49□□□□□ -0.73
RABGGTA-221ENST00000561055 GRIN2CQ14957 1233 aa10.49□□□□□ -0.73
RABGGTA-221ENST00000561055 ENOX2Q16206 610 aaKnown RBP10.49□□□□□ -0.73
RABGGTA-221ENST00000561055 ARMCX5Q6P1M9 558 aa10.49□□□□□ -0.73
RABGGTA-221ENST00000561055 FOXR2Q6PJQ5 311 aa10.49□□□□□ -0.73
RABGGTA-221ENST00000561055 KCNT2Q6UVM3 1135 aa10.49□□□□□ -0.73
RABGGTA-221ENST00000561055 HS2ST1Q7LGA3 356 aa10.49□□□□□ -0.73
RABGGTA-221ENST00000561055 NT5DC4Q86YG4 428 aa10.49□□□□□ -0.73
RABGGTA-221ENST00000561055 SLC39A11Q8N1S5 342 aa10.49□□□□□ -0.73
RABGGTA-221ENST00000561055 DEFB123Q8N688 67 aa10.49□□□□□ -0.73
RABGGTA-221ENST00000561055 FBXO22Q8NEZ5 403 aa10.49□□□□□ -0.73
RABGGTA-221ENST00000561055 GPT2Q8TD30 523 aa10.49□□□□□ -0.73
RABGGTA-221ENST00000561055 ZNF558Q96NG5 402 aa10.49□□□□□ -0.73
RABGGTA-221ENST00000561055 RPS6KC1Q96S38 1066 aa10.49□□□□□ -0.73
RABGGTA-221ENST00000561055 CBWD1Q9BRT8 395 aa10.49□□□□□ -0.73
RABGGTA-221ENST00000561055 C11orf84Q9BUA3 381 aaPredicted RBP10.49□□□□□ -0.73
RABGGTA-221ENST00000561055 CXCL16Q9H2A7 254 aa10.49□□□□□ -0.73
RABGGTA-221ENST00000561055 CLSTN2Q9H4D0 955 aa10.49□□□□□ -0.73
RABGGTA-221ENST00000561055 ASB7Q9H672 318 aa10.49□□□□□ -0.73
RABGGTA-221ENST00000561055 RPF1Q9H9Y2 349 aaKnown RBP10.49□□□□□ -0.73
RABGGTA-221ENST00000561055 AGPAT3Q9NRZ7 376 aa10.49□□□□□ -0.73
RABGGTA-221ENST00000561055 KLK14Q9P0G3 267 aa10.49□□□□□ -0.73
RABGGTA-221ENST00000561055 HCSTQ9UBK5 93 aa10.49□□□□□ -0.73
RABGGTA-221ENST00000561055 DNAJB4Q9UDY4 337 aa10.49□□□□□ -0.73
RABGGTA-221ENST00000561055 MAN1B1Q9UKM7 699 aa10.49□□□□□ -0.73
RABGGTA-221ENST00000561055 PLAGL2Q9UPG8 496 aa10.49□□□□□ -0.73
RABGGTA-221ENST00000561055 LZTS1Q9Y250 596 aa10.49□□□□□ -0.73
RABGGTA-221ENST00000561055 INPP5FQ9Y2H2 1132 aa10.49□□□□□ -0.73
RABGGTA-221ENST00000561055 DERAQ9Y315 318 aa10.49□□□□□ -0.73
RABGGTA-221ENST00000561055 EPOPA6NHQ4 379 aa10.48□□□□□ -0.73
RABGGTA-221ENST00000561055 NRP1O14786 923 aa10.48□□□□□ -0.73
RABGGTA-221ENST00000561055 EXTL3O43909 919 aa10.48□□□□□ -0.73
RABGGTA-221ENST00000561055 B4GALT3O60512 393 aa10.48□□□□□ -0.73
RABGGTA-221ENST00000561055 MBD3O95983 291 aa10.48□□□□□ -0.73
RABGGTA-221ENST00000561055 CXCL8P10145 99 aa10.48□□□□□ -0.73
RABGGTA-221ENST00000561055 BMP6P22004 513 aa10.48□□□□□ -0.73
RABGGTA-221ENST00000561055 CTNNB1P35222 781 aa10.48□□□□□ -0.73
RABGGTA-221ENST00000561055 PRCPP42785 496 aa10.48□□□□□ -0.73
RABGGTA-221ENST00000561055 ACOT2P49753 483 aa10.48□□□□□ -0.73
RABGGTA-221ENST00000561055 OSTNP61366 133 aa10.48□□□□□ -0.73
RABGGTA-221ENST00000561055 ZCWPW2Q504Y3 356 aa10.48□□□□□ -0.73
RABGGTA-221ENST00000561055 SEZ6Q53EL9 994 aa10.48□□□□□ -0.73
RABGGTA-221ENST00000561055 ZBTB41Q5SVQ8 909 aa10.48□□□□□ -0.73
RABGGTA-221ENST00000561055 CENPPQ6IPU0 288 aa10.48□□□□□ -0.73
RABGGTA-221ENST00000561055 RBM43Q6ZSC3 357 aaKnown RBP10.48□□□□□ -0.73
RABGGTA-221ENST00000561055 NELFCDQ8IXH7 590 aa10.48□□□□□ -0.73
RABGGTA-221ENST00000561055 ADSSL1Q8N142 457 aa10.48□□□□□ -0.73
RABGGTA-221ENST00000561055 GPD1LQ8N335 351 aa10.48□□□□□ -0.73
RABGGTA-221ENST00000561055 KLHL23Q8NBE8 558 aa10.48□□□□□ -0.73
RABGGTA-221ENST00000561055 ARNTL2Q8WYA1 636 aa10.48□□□□□ -0.73
RABGGTA-221ENST00000561055 ERCC4Q92889 916 aaPredicted RBP10.48□□□□□ -0.73
RABGGTA-221ENST00000561055 ZMAT2Q96NC0 199 aaKnown RBP10.48□□□□□ -0.73
RABGGTA-221ENST00000561055 GUCD1Q96NT3 240 aa10.48□□□□□ -0.73
RABGGTA-221ENST00000561055 FAM193BQ96PV7 902 aaPredicted RBP10.48□□□□□ -0.73
RABGGTA-221ENST00000561055 LMAN2LQ9H0V9 348 aa10.48□□□□□ -0.73
RABGGTA-221ENST00000561055 SLC38A7Q9NVC3 462 aa10.48□□□□□ -0.73
RABGGTA-221ENST00000561055 SPG21Q9NZD8 308 aa10.48□□□□□ -0.73
RABGGTA-221ENST00000561055 HSPBP1Q9NZL4 362 aa10.48□□□□□ -0.73
RABGGTA-221ENST00000561055 STK39Q9UEW8 545 aa10.48□□□□□ -0.73
RABGGTA-221ENST00000561055 FAN1Q9Y2M0 1017 aa10.48□□□□□ -0.73
RABGGTA-221ENST00000561055 ZNF233A6NK53 670 aa10.47□□□□□ -0.73
RABGGTA-221ENST00000561055 LACTBL1A8MY62 500 aa10.47□□□□□ -0.73
RABGGTA-221ENST00000561055 TMEM189-UBE2V1I3L0A0 370 aa10.47□□□□□ -0.73
RABGGTA-221ENST00000561055 MAPK13O15264 365 aa10.47□□□□□ -0.73
RABGGTA-221ENST00000561055 ZC3H11AO75152 810 aaKnown RBP eCLIP10.47□□□□□ -0.73
RABGGTA-221ENST00000561055 FGF18O76093 207 aa10.47□□□□□ -0.73
RABGGTA-221ENST00000561055 IL18RAPO95256 599 aa10.47□□□□□ -0.73
RABGGTA-221ENST00000561055 ITGB1P05556 798 aa10.47□□□□□ -0.73
RABGGTA-221ENST00000561055 HARSP12081 509 aaKnown RBP10.47□□□□□ -0.73
RABGGTA-221ENST00000561055 CYP3A5P20815 502 aa10.47□□□□□ -0.73
RABGGTA-221ENST00000561055 RPL9P32969 192 aaKnown RBP10.47□□□□□ -0.73
RABGGTA-221ENST00000561055 SLC11A1P49279 550 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms