RNA–Protein interactions for RNA: ENST00000558970.2

GABPB1-208, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5

Gene GABPB1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-208ENST00000558970 OFD1O75665 1012 aa13.52□□□□□ -0.25
GABPB1-208ENST00000558970 LDHAP00338 332 aaKnown RBP13.52□□□□□ -0.25
GABPB1-208ENST00000558970 CLTAP09496 248 aa13.52□□□□□ -0.25
GABPB1-208ENST00000558970 PBX3P40426 434 aa13.52□□□□□ -0.25
GABPB1-208ENST00000558970 WNT7BP56706 349 aa13.52□□□□□ -0.25
GABPB1-208ENST00000558970 PPP2R3AQ06190 1150 aa13.52□□□□□ -0.25
GABPB1-208ENST00000558970 ADAM9Q13443 819 aa13.52□□□□□ -0.25
GABPB1-208ENST00000558970 SNRNP35Q16560 246 aaKnown RBP13.52□□□□□ -0.25
GABPB1-208ENST00000558970 TPD52L1Q16890 204 aaPredicted RBP13.52□□□□□ -0.25
GABPB1-208ENST00000558970 SLC10A6Q3KNW5 377 aa13.52□□□□□ -0.25
GABPB1-208ENST00000558970 ANO6Q4KMQ2 910 aa13.52□□□□□ -0.25
GABPB1-208ENST00000558970 ZCWPW2Q504Y3 356 aa13.52□□□□□ -0.25
GABPB1-208ENST00000558970 CENPPQ6IPU0 288 aa13.52□□□□□ -0.25
GABPB1-208ENST00000558970 SPRED2Q7Z698 418 aa13.52□□□□□ -0.25
GABPB1-208ENST00000558970 RABGGTAQ92696 567 aa13.52□□□□□ -0.25
GABPB1-208ENST00000558970 SNX27Q96L92 541 aa13.52□□□□□ -0.25
GABPB1-208ENST00000558970 PBX4Q9BYU1 374 aa13.52□□□□□ -0.25
GABPB1-208ENST00000558970 TOPORSQ9NS56 1045 aaPredicted RBP13.52□□□□□ -0.25
GABPB1-208ENST00000558970 ANO10Q9NW15 660 aa13.52□□□□□ -0.25
GABPB1-208ENST00000558970 RNF216Q9NWF9 866 aaPredicted RBP13.52□□□□□ -0.25
GABPB1-208ENST00000558970 DACH1Q9UI36 760 aa13.52□□□□□ -0.25
GABPB1-208ENST00000558970 MTUS1Q9ULD2 1270 aa13.52□□□□□ -0.25
GABPB1-208ENST00000558970 PLAGL2Q9UPG8 496 aa13.52□□□□□ -0.25
GABPB1-208ENST00000558970 TRAF3IP3Q9Y228 551 aa13.52□□□□□ -0.25
GABPB1-208ENST00000558970 YBX2Q9Y2T7 364 aaKnown RBP13.52□□□□□ -0.25
GABPB1-208ENST00000558970 COL4A4P53420 1690 aaPredicted RBP13.52□□□□□ -0.25
GABPB1-208ENST00000558970 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.51□□□□□ -0.25
GABPB1-208ENST00000558970 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.51□□□□□ -0.25
GABPB1-208ENST00000558970 BICDL2A1A5D9 508 aa13.51□□□□□ -0.25
GABPB1-208ENST00000558970 PTGESO14684 152 aa13.51□□□□□ -0.25
GABPB1-208ENST00000558970 ZC3H11AO75152 810 aaKnown RBP eCLIP13.51□□□□□ -0.25
GABPB1-208ENST00000558970 ARHGEF15O94989 841 aa13.51□□□□□ -0.25
GABPB1-208ENST00000558970 LETM1O95202 739 aaPredicted RBP13.51□□□□□ -0.25
GABPB1-208ENST00000558970 CA3P07451 260 aa13.51□□□□□ -0.25
GABPB1-208ENST00000558970 CCDC192P0DO97 292 aa13.51□□□□□ -0.25
GABPB1-208ENST00000558970 PPP1R2P41236 205 aa13.51□□□□□ -0.25
GABPB1-208ENST00000558970 NOMO2Q5JPE7 1267 aa13.51□□□□□ -0.25
GABPB1-208ENST00000558970 JADE1Q6IE81 842 aa13.51□□□□□ -0.25
GABPB1-208ENST00000558970 CSGALNACT2Q8N6G5 542 aa13.51□□□□□ -0.25
GABPB1-208ENST00000558970 PHOSPHO2Q8TCD6 241 aa13.51□□□□□ -0.25
GABPB1-208ENST00000558970 CCDC127Q96BQ5 260 aa13.51□□□□□ -0.25
GABPB1-208ENST00000558970 KIF12Q96FN5 646 aa13.51□□□□□ -0.25
GABPB1-208ENST00000558970 ZMAT2Q96NC0 199 aaKnown RBP13.51□□□□□ -0.25
GABPB1-208ENST00000558970 FAM193BQ96PV7 902 aaPredicted RBP13.51□□□□□ -0.25
GABPB1-208ENST00000558970 RAD9AQ99638 391 aa13.51□□□□□ -0.25
GABPB1-208ENST00000558970 DUSP9Q99956 384 aaKnown RBP13.51□□□□□ -0.25
GABPB1-208ENST00000558970 TMEM117Q9H0C3 514 aa13.51□□□□□ -0.25
GABPB1-208ENST00000558970 NKX2-4Q9H2Z4 354 aa13.51□□□□□ -0.25
GABPB1-208ENST00000558970 CERS4Q9HA82 394 aa13.51□□□□□ -0.25
GABPB1-208ENST00000558970 GOLGA2P5Q9HBQ8 144 aa13.51□□□□□ -0.25
GABPB1-208ENST00000558970 PDE11AQ9HCR9 933 aa13.51□□□□□ -0.25
GABPB1-208ENST00000558970 TBC1D13Q9NVG8 400 aa13.51□□□□□ -0.25
GABPB1-208ENST00000558970 CGNQ9P2M7 1197 aaKnown RBP13.51□□□□□ -0.25
GABPB1-208ENST00000558970 FRMD4BQ9Y2L6 1034 aa13.51□□□□□ -0.25
GABPB1-208ENST00000558970 GIT1Q9Y2X7 761 aa13.51□□□□□ -0.25
GABPB1-208ENST00000558970 INSL6Q9Y581 213 aa13.51□□□□□ -0.25
GABPB1-208ENST00000558970 MRPL42Q9Y6G3 142 aaKnown RBP13.51□□□□□ -0.25
GABPB1-208ENST00000558970 CASTOR2A6NHX0 329 aa13.5□□□□□ -0.25
GABPB1-208ENST00000558970 ZNF233A6NK53 670 aa13.5□□□□□ -0.25
GABPB1-208ENST00000558970 CETN3O15182 167 aa13.5□□□□□ -0.25
GABPB1-208ENST00000558970 B4GALT3O60512 393 aa13.5□□□□□ -0.25
GABPB1-208ENST00000558970 AKAP3O75969 853 aa13.5□□□□□ -0.25
GABPB1-208ENST00000558970 CSPG5O95196 566 aa13.5□□□□□ -0.25
GABPB1-208ENST00000558970 NFICP08651 508 aa13.5□□□□□ -0.25
GABPB1-208ENST00000558970 DLATP10515 647 aaKnown RBP13.5□□□□□ -0.25
GABPB1-208ENST00000558970 RPL13P26373 211 aaKnown RBP13.5□□□□□ -0.25
GABPB1-208ENST00000558970 GUCY2FP51841 1108 aa13.5□□□□□ -0.25
GABPB1-208ENST00000558970 SNRPFP62306 86 aaKnown RBP13.5□□□□□ -0.25
GABPB1-208ENST00000558970 LRRC63Q05C16 580 aa13.5□□□□□ -0.25
GABPB1-208ENST00000558970 EDRF1Q3B7T1 1238 aa13.5□□□□□ -0.25
GABPB1-208ENST00000558970 TTI2Q6NXR4 508 aa13.5□□□□□ -0.25
GABPB1-208ENST00000558970 LRRC55Q6ZSA7 311 aa13.5□□□□□ -0.25
GABPB1-208ENST00000558970 ZNF280BQ86YH2 543 aa13.5□□□□□ -0.25
GABPB1-208ENST00000558970 BRSK2Q8IWQ3 736 aa13.5□□□□□ -0.25
GABPB1-208ENST00000558970 C12orf56Q8IXR9 622 aa13.5□□□□□ -0.25
GABPB1-208ENST00000558970 FAM186BQ8IYM0 893 aa13.5□□□□□ -0.25
GABPB1-208ENST00000558970 LRRC43Q8N309 656 aa13.5□□□□□ -0.25
GABPB1-208ENST00000558970 FIBCD1Q8N539 461 aa13.5□□□□□ -0.25
GABPB1-208ENST00000558970 C18orf25Q96B23 403 aaPredicted RBP13.5□□□□□ -0.25
GABPB1-208ENST00000558970 ZNF689Q96CS4 500 aaPredicted RBP13.5□□□□□ -0.25
GABPB1-208ENST00000558970 MED15Q96RN5 788 aa13.5□□□□□ -0.25
GABPB1-208ENST00000558970 POP1Q99575 1024 aaKnown RBP13.5□□□□□ -0.25
GABPB1-208ENST00000558970 SRRTQ9BXP5 876 aaKnown RBP13.5□□□□□ -0.25
GABPB1-208ENST00000558970 MMRN2Q9H8L6 949 aa13.5□□□□□ -0.25
GABPB1-208ENST00000558970 RC3H2Q9HBD1 1191 aaKnown RBP13.5□□□□□ -0.25
GABPB1-208ENST00000558970 UBN1Q9NPG3 1134 aa13.5□□□□□ -0.25
GABPB1-208ENST00000558970 DNAJB4Q9UDY4 337 aa13.5□□□□□ -0.25
GABPB1-208ENST00000558970 TUBGCP4Q9UGJ1 667 aa13.5□□□□□ -0.25
GABPB1-208ENST00000558970 RWDD2AQ9UIY3 292 aa13.5□□□□□ -0.25
GABPB1-208ENST00000558970 MSRAQ9UJ68 235 aa13.5□□□□□ -0.25
GABPB1-208ENST00000558970 SMIM28A0A1B0GU29 152 aa13.49□□□□□ -0.25
GABPB1-208ENST00000558970 TTC26A0AVF1 554 aa13.49□□□□□ -0.25
GABPB1-208ENST00000558970 NT5C1B-RDH14C9J2C7 533 aa13.49□□□□□ -0.25
GABPB1-208ENST00000558970 KIAA0391O15091 583 aaKnown RBP13.49□□□□□ -0.25
GABPB1-208ENST00000558970 DDHD2O94830 711 aa13.49□□□□□ -0.25
GABPB1-208ENST00000558970 CLSTN1O94985 981 aa13.49□□□□□ -0.25
GABPB1-208ENST00000558970 THP07101 528 aa13.49□□□□□ -0.25
GABPB1-208ENST00000558970 TRIM49P0CI25 452 aa13.49□□□□□ -0.25
GABPB1-208ENST00000558970 TRIM49CP0CI26 452 aa13.49□□□□□ -0.25
GABPB1-208ENST00000558970 EPB41P11171 864 aaKnown RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms