RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 UHRF1Q96T88 793 aaPredicted RBP5.53□□□□□ -1.52
CASC4-206ENST00000558847 CGRRF1Q99675 332 aa5.53□□□□□ -1.52
CASC4-206ENST00000558847 KLC2Q9H0B6 622 aa5.53□□□□□ -1.52
CASC4-206ENST00000558847 LANCL2Q9NS86 450 aa5.53□□□□□ -1.52
CASC4-206ENST00000558847 L1RE1Q9UN81 338 aa5.53□□□□□ -1.52
CASC4-206ENST00000558847 TSC22D4Q9Y3Q8 395 aa5.53□□□□□ -1.52
CASC4-206ENST00000558847 MATN2O00339 956 aa5.52□□□□□ -1.53
CASC4-206ENST00000558847 TEX33O43247 280 aa5.52□□□□□ -1.53
CASC4-206ENST00000558847 B4GALT4O60513 344 aa5.52□□□□□ -1.53
CASC4-206ENST00000558847 ALDH1A2O94788 518 aa5.52□□□□□ -1.53
CASC4-206ENST00000558847 FTH1P19P0C7X4 201 aa5.52□□□□□ -1.53
CASC4-206ENST00000558847 AK2P54819 239 aa5.52□□□□□ -1.53
CASC4-206ENST00000558847 PPP2CBP62714 309 aa5.52□□□□□ -1.53
CASC4-206ENST00000558847 PPP2CAP67775 309 aa5.52□□□□□ -1.53
CASC4-206ENST00000558847 NFYCQ13952 458 aa5.52□□□□□ -1.53
CASC4-206ENST00000558847 PCOLCEQ15113 449 aa5.52□□□□□ -1.53
CASC4-206ENST00000558847 UBE3CQ15386 1083 aa5.52□□□□□ -1.53
CASC4-206ENST00000558847 RNF151Q2KHN1 245 aa5.52□□□□□ -1.53
CASC4-206ENST00000558847 GAGE13Q4V321 117 aa5.52□□□□□ -1.53
CASC4-206ENST00000558847 GADL1Q6ZQY3 521 aa5.52□□□□□ -1.53
CASC4-206ENST00000558847 ZFPM1Q8IX07 1006 aa5.52□□□□□ -1.53
CASC4-206ENST00000558847 PLA2G15Q8NCC3 412 aa5.52□□□□□ -1.53
CASC4-206ENST00000558847 OR7D4Q8NG98 312 aa5.52□□□□□ -1.53
CASC4-206ENST00000558847 KLHDC4Q8TBB5 520 aa5.52□□□□□ -1.53
CASC4-206ENST00000558847 CFHR4Q92496 578 aa5.52□□□□□ -1.53
CASC4-206ENST00000558847 DPF2Q92785 391 aa5.52□□□□□ -1.53
CASC4-206ENST00000558847 HOXB13Q92826 284 aaPredicted RBP5.52□□□□□ -1.53
CASC4-206ENST00000558847 STRBPQ96SI9 672 aaKnown RBP5.52□□□□□ -1.53
CASC4-206ENST00000558847 ELAC2Q9BQ52 826 aaKnown RBP5.52□□□□□ -1.53
CASC4-206ENST00000558847 B3GNT5Q9BYG0 378 aa5.52□□□□□ -1.53
CASC4-206ENST00000558847 NUP62CLQ9H1M0 184 aa5.52□□□□□ -1.53
CASC4-206ENST00000558847 OR10A2Q9H208 303 aa5.52□□□□□ -1.53
CASC4-206ENST00000558847 MSL2Q9HCI7 577 aa5.52□□□□□ -1.53
CASC4-206ENST00000558847 TMEM140Q9NV12 185 aa5.52□□□□□ -1.53
CASC4-206ENST00000558847 MAGEL2Q9UJ55 1249 aa5.52□□□□□ -1.53
CASC4-206ENST00000558847 FAM50BQ9Y247 325 aa5.52□□□□□ -1.53
CASC4-206ENST00000558847 A0A088AWK7 358 aa5.51□□□□□ -1.53
CASC4-206ENST00000558847 FOXN3O00409 490 aaPredicted RBP5.51□□□□□ -1.53
CASC4-206ENST00000558847 APAF1O14727 1248 aa5.51□□□□□ -1.53
CASC4-206ENST00000558847 PMM2O15305 246 aa5.51□□□□□ -1.53
CASC4-206ENST00000558847 FRS3O43559 492 aa5.51□□□□□ -1.53
CASC4-206ENST00000558847 ALDH2P05091 517 aa5.51□□□□□ -1.53
CASC4-206ENST00000558847 JUNP05412 331 aaKnown RBP5.51□□□□□ -1.53
CASC4-206ENST00000558847 HNRNPLP14866 589 aaKnown RBP eCLIP5.51□□□□□ -1.53
CASC4-206ENST00000558847 HTR3AP46098 478 aa5.51□□□□□ -1.53
CASC4-206ENST00000558847 MRE11P49959 708 aa5.51□□□□□ -1.53
CASC4-206ENST00000558847 FXR1P51114 621 aaKnown RBP eCLIP5.51□□□□□ -1.53
CASC4-206ENST00000558847 HK3P52790 923 aa5.51□□□□□ -1.53
CASC4-206ENST00000558847 ZNF280AP59817 542 aaPredicted RBP5.51□□□□□ -1.53
CASC4-206ENST00000558847 HGFACQ04756 655 aa5.51□□□□□ -1.53
CASC4-206ENST00000558847 NOGQ13253 232 aa5.51□□□□□ -1.53
CASC4-206ENST00000558847 IFIT5Q13325 482 aaKnown RBP5.51□□□□□ -1.53
CASC4-206ENST00000558847 IL10RAQ13651 578 aa5.51□□□□□ -1.53
CASC4-206ENST00000558847 GALEQ14376 348 aa5.51□□□□□ -1.53
CASC4-206ENST00000558847 RNF220Q5VTB9 566 aa5.51□□□□□ -1.53
CASC4-206ENST00000558847 SLFN13Q68D06 897 aa5.51□□□□□ -1.53
CASC4-206ENST00000558847 IL31Q6EBC2 164 aa5.51□□□□□ -1.53
CASC4-206ENST00000558847 NPNTQ6UXI9 565 aa5.51□□□□□ -1.53
CASC4-206ENST00000558847 KRT78Q8N1N4 520 aa5.51□□□□□ -1.53
CASC4-206ENST00000558847 PQLC1Q8N2U9 271 aa5.51□□□□□ -1.53
CASC4-206ENST00000558847 FAM156AQ8NDB6 213 aa5.51□□□□□ -1.53
CASC4-206ENST00000558847 PPP1R35Q8TAP8 253 aa5.51□□□□□ -1.53
CASC4-206ENST00000558847 CASKIN2Q8WXE0 1202 aa5.51□□□□□ -1.53
CASC4-206ENST00000558847 KAT5Q92993 513 aa5.51□□□□□ -1.53
CASC4-206ENST00000558847 CLPTM1LQ96KA5 538 aa5.51□□□□□ -1.53
CASC4-206ENST00000558847 MRIQ9BWK5 157 aa5.51□□□□□ -1.53
CASC4-206ENST00000558847 VPS11Q9H270 941 aa5.51□□□□□ -1.53
CASC4-206ENST00000558847 SEC61A2Q9H9S3 476 aa5.51□□□□□ -1.53
CASC4-206ENST00000558847 CNNM1Q9NRU3 951 aa5.51□□□□□ -1.53
CASC4-206ENST00000558847 MOCS1Q9NZB8 636 aa5.51□□□□□ -1.53
CASC4-206ENST00000558847 FAM184BQ9ULE4 1060 aa5.51□□□□□ -1.53
CASC4-206ENST00000558847 TCAF1Q9Y4C2 921 aa5.51□□□□□ -1.53
CASC4-206ENST00000558847 CTDP1Q9Y5B0 961 aaPredicted RBP5.51□□□□□ -1.53
CASC4-206ENST00000558847 GPR42O15529 346 aa5.5□□□□□ -1.53
CASC4-206ENST00000558847 ARHGAP6O43182 974 aa5.5□□□□□ -1.53
CASC4-206ENST00000558847 FZD7O75084 574 aa5.5□□□□□ -1.53
CASC4-206ENST00000558847 LDHAP00338 332 aaKnown RBP5.5□□□□□ -1.53
CASC4-206ENST00000558847 IL2RBP14784 551 aa5.5□□□□□ -1.53
CASC4-206ENST00000558847 SMARCA1P28370 1054 aa5.5□□□□□ -1.53
CASC4-206ENST00000558847 ADSLP30566 484 aaPredicted RBP5.5□□□□□ -1.53
CASC4-206ENST00000558847 KIR2DL3P43628 341 aa5.5□□□□□ -1.53
CASC4-206ENST00000558847 MAP2K6P52564 334 aa5.5□□□□□ -1.53
CASC4-206ENST00000558847 DSC2Q02487 901 aa5.5□□□□□ -1.53
CASC4-206ENST00000558847 DUSP2Q05923 314 aa5.5□□□□□ -1.53
CASC4-206ENST00000558847 SEMA5AQ13591 1074 aa5.5□□□□□ -1.53
CASC4-206ENST00000558847 FGL2Q14314 439 aa5.5□□□□□ -1.53
CASC4-206ENST00000558847 SEPT2Q15019 361 aa5.5□□□□□ -1.53
CASC4-206ENST00000558847 POLD3Q15054 466 aaPredicted RBP5.5□□□□□ -1.53
CASC4-206ENST00000558847 MAEAQ7L5Y9 396 aa5.5□□□□□ -1.53
CASC4-206ENST00000558847 ACRBPQ8NEB7 543 aa5.5□□□□□ -1.53
CASC4-206ENST00000558847 PIK3C3Q8NEB9 887 aa5.5□□□□□ -1.53
CASC4-206ENST00000558847 LRTOMTQ8WZ04 291 aa5.5□□□□□ -1.53
CASC4-206ENST00000558847 GJA10Q969M2 543 aa5.5□□□□□ -1.53
CASC4-206ENST00000558847 SLC39A13Q96H72 371 aa5.5□□□□□ -1.53
CASC4-206ENST00000558847 LRRC27Q9C0I9 530 aa5.5□□□□□ -1.53
CASC4-206ENST00000558847 SENP6Q9GZR1 1112 aaPredicted RBP5.5□□□□□ -1.53
CASC4-206ENST00000558847 SLC6A15Q9H2J7 730 aa5.5□□□□□ -1.53
CASC4-206ENST00000558847 WDCPQ9H6R7 721 aa5.5□□□□□ -1.53
CASC4-206ENST00000558847 GNL3LQ9NVN8 582 aaKnown RBP5.5□□□□□ -1.53
CASC4-206ENST00000558847 KLHL11Q9NVR0 708 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms