RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 ACAP3Q96P50 834 aa13.67□□□□□ -0.22
SLIRP-211ENST00000557623 HS3ST6Q96QI5 342 aa13.67□□□□□ -0.22
SLIRP-211ENST00000557623 FIZ1Q96SL8 496 aa13.67□□□□□ -0.22
SLIRP-211ENST00000557623 COLEC11Q9BWP8 271 aa13.67□□□□□ -0.22
SLIRP-211ENST00000557623 ENTPD7Q9NQZ7 604 aa13.67□□□□□ -0.22
SLIRP-211ENST00000557623 OLFML3Q9NRN5 406 aa13.67□□□□□ -0.22
SLIRP-211ENST00000557623 ANKFY1Q9P2R3 1169 aa13.67□□□□□ -0.22
SLIRP-211ENST00000557623 USP25Q9UHP3 1055 aa13.67□□□□□ -0.22
SLIRP-211ENST00000557623 ABLIM1O14639 778 aa13.66□□□□□ -0.22
SLIRP-211ENST00000557623 NRP1O14786 923 aa13.66□□□□□ -0.22
SLIRP-211ENST00000557623 FSCN2O14926 492 aa13.66□□□□□ -0.22
SLIRP-211ENST00000557623 CSPG5O95196 566 aa13.66□□□□□ -0.22
SLIRP-211ENST00000557623 IRS1P35568 1242 aa13.66□□□□□ -0.22
SLIRP-211ENST00000557623 OR1G1P47890 313 aa13.66□□□□□ -0.22
SLIRP-211ENST00000557623 MCL1Q07820 350 aa13.66□□□□□ -0.22
SLIRP-211ENST00000557623 TUSC3Q13454 348 aa13.66□□□□□ -0.22
SLIRP-211ENST00000557623 SMC1AQ14683 1233 aaKnown RBP13.66□□□□□ -0.22
SLIRP-211ENST00000557623 VARS2Q5ST30 1063 aaKnown RBP13.66□□□□□ -0.22
SLIRP-211ENST00000557623 CNNM4Q6P4Q7 775 aa13.66□□□□□ -0.22
SLIRP-211ENST00000557623 STXBP4Q6ZWJ1 553 aa13.66□□□□□ -0.22
SLIRP-211ENST00000557623 TMC7Q7Z402 723 aa13.66□□□□□ -0.22
SLIRP-211ENST00000557623 DDX53Q86TM3 631 aaKnown RBP13.66□□□□□ -0.22
SLIRP-211ENST00000557623 MAP4K3Q8IVH8 894 aa13.66□□□□□ -0.22
SLIRP-211ENST00000557623 STAMQ92783 540 aa13.66□□□□□ -0.22
SLIRP-211ENST00000557623 ZBTB45Q96K62 511 aaPredicted RBP13.66□□□□□ -0.22
SLIRP-211ENST00000557623 C7orf25Q9BPX7 421 aa13.66□□□□□ -0.22
SLIRP-211ENST00000557623 TCF25Q9BQ70 676 aa13.66□□□□□ -0.22
SLIRP-211ENST00000557623 TRIM9Q9C026 710 aa13.66□□□□□ -0.22
SLIRP-211ENST00000557623 EXOC7Q9UPT5 735 aa13.66□□□□□ -0.22
SLIRP-211ENST00000557623 COL6A3P12111 3177 aa13.65□□□□□ -0.22
SLIRP-211ENST00000557623 A0A1W2PQ27 194 aa13.65□□□□□ -0.22
SLIRP-211ENST00000557623 A0A1W2PQ64 194 aa13.65□□□□□ -0.22
SLIRP-211ENST00000557623 A0A1W2PQD8 194 aa13.65□□□□□ -0.22
SLIRP-211ENST00000557623 B4GALT3O60512 393 aa13.65□□□□□ -0.22
SLIRP-211ENST00000557623 GCNT3O95395 438 aa13.65□□□□□ -0.22
SLIRP-211ENST00000557623 HARSP12081 509 aaKnown RBP13.65□□□□□ -0.22
SLIRP-211ENST00000557623 PFKFB1P16118 471 aa13.65□□□□□ -0.22
SLIRP-211ENST00000557623 ERVFC1P60507 584 aa13.65□□□□□ -0.22
SLIRP-211ENST00000557623 OSTNP61366 133 aa13.65□□□□□ -0.22
SLIRP-211ENST00000557623 ASIC1P78348 528 aa13.65□□□□□ -0.22
SLIRP-211ENST00000557623 MRPS5P82675 430 aaKnown RBP13.65□□□□□ -0.22
SLIRP-211ENST00000557623 ZC2HC1CQ53FD0 456 aaPredicted RBP13.65□□□□□ -0.22
SLIRP-211ENST00000557623 PLPP4Q5VZY2 271 aa13.65□□□□□ -0.22
SLIRP-211ENST00000557623 SLFN12LQ6IEE8 588 aa13.65□□□□□ -0.22
SLIRP-211ENST00000557623 TMEM173Q86WV6 379 aaPredicted RBP13.65□□□□□ -0.22
SLIRP-211ENST00000557623 VPS52Q8N1B4 723 aa13.65□□□□□ -0.22
SLIRP-211ENST00000557623 CEP120Q8N960 986 aa13.65□□□□□ -0.22
SLIRP-211ENST00000557623 PABPC5Q96DU9 382 aaKnown RBP13.65□□□□□ -0.22
SLIRP-211ENST00000557623 CHAMP1Q96JM3 812 aa13.65□□□□□ -0.22
SLIRP-211ENST00000557623 ACCSQ96QU6 501 aa13.65□□□□□ -0.22
SLIRP-211ENST00000557623 CDCA3Q99618 268 aaPredicted RBP13.65□□□□□ -0.22
SLIRP-211ENST00000557623 TLE6Q9H808 572 aa13.65□□□□□ -0.22
SLIRP-211ENST00000557623 PRDM6Q9NQX0 595 aa13.65□□□□□ -0.22
SLIRP-211ENST00000557623 MYO7AQ13402 2215 aa13.65□□□□□ -0.22
SLIRP-211ENST00000557623 ANK1P16157 1881 aa13.65□□□□□ -0.22
SLIRP-211ENST00000557623 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.64□□□□□ -0.23
SLIRP-211ENST00000557623 FAM237AA0A1B0GTK4 181 aa13.64□□□□□ -0.23
SLIRP-211ENST00000557623 A0A1B0GVL5 298 aa13.64□□□□□ -0.23
SLIRP-211ENST00000557623 PTGESO14684 152 aa13.64□□□□□ -0.23
SLIRP-211ENST00000557623 SLFN14P0C7P3 912 aa13.64□□□□□ -0.23
SLIRP-211ENST00000557623 SYKP43405 635 aa13.64□□□□□ -0.23
SLIRP-211ENST00000557623 HYAL1Q12794 435 aa13.64□□□□□ -0.23
SLIRP-211ENST00000557623 COASYQ13057 564 aa13.64□□□□□ -0.23
SLIRP-211ENST00000557623 XKR4Q5GH76 650 aa13.64□□□□□ -0.23
SLIRP-211ENST00000557623 L1TD1Q5T7N2 865 aaKnown RBP13.64□□□□□ -0.23
SLIRP-211ENST00000557623 ALKAL1Q6UXT8 129 aa13.64□□□□□ -0.23
SLIRP-211ENST00000557623 UNC13DQ70J99 1090 aa13.64□□□□□ -0.23
SLIRP-211ENST00000557623 ADGRD2Q7Z7M1 963 aa13.64□□□□□ -0.23
SLIRP-211ENST00000557623 STRA6Q9BX79 667 aa13.64□□□□□ -0.23
SLIRP-211ENST00000557623 ZBP1Q9H171 429 aa13.64□□□□□ -0.23
SLIRP-211ENST00000557623 IGFLR1Q9H665 355 aa13.64□□□□□ -0.23
SLIRP-211ENST00000557623 UBE2ZQ9H832 354 aaPredicted RBP13.64□□□□□ -0.23
SLIRP-211ENST00000557623 PLEKHA5Q9HAU0 1116 aa13.64□□□□□ -0.23
SLIRP-211ENST00000557623 SLC38A7Q9NVC3 462 aa13.64□□□□□ -0.23
SLIRP-211ENST00000557623 TBC1D7Q9P0N9 293 aa13.64□□□□□ -0.23
SLIRP-211ENST00000557623 SERTAD1Q9UHV2 236 aa13.64□□□□□ -0.23
SLIRP-211ENST00000557623 HPSEQ9Y251 543 aa13.64□□□□□ -0.23
SLIRP-211ENST00000557623 SSX2IPQ9Y2D8 614 aa13.64□□□□□ -0.23
SLIRP-211ENST00000557623 PRG3Q9Y2Y8 225 aaPredicted RBP13.64□□□□□ -0.23
SLIRP-211ENST00000557623 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.64□□□□□ -0.23
SLIRP-211ENST00000557623 PVALEFA0A1B0GWK0 134 aa13.63□□□□□ -0.23
SLIRP-211ENST00000557623 GOLGA6L4A6NEF3 574 aa13.63□□□□□ -0.23
SLIRP-211ENST00000557623 OGTO15294 1046 aa13.63□□□□□ -0.23
SLIRP-211ENST00000557623 CXCL14O95715 111 aa13.63□□□□□ -0.23
SLIRP-211ENST00000557623 MYL1P05976 194 aa13.63□□□□□ -0.23
SLIRP-211ENST00000557623 CLTAP09496 248 aa13.63□□□□□ -0.23
SLIRP-211ENST00000557623 CTSAP10619 480 aa13.63□□□□□ -0.23
SLIRP-211ENST00000557623 AFMP43652 599 aa13.63□□□□□ -0.23
SLIRP-211ENST00000557623 NRIP1P48552 1158 aa13.63□□□□□ -0.23
SLIRP-211ENST00000557623 HSP90AA2PQ14568 343 aaPredicted RBP13.63□□□□□ -0.23
SLIRP-211ENST00000557623 COL19A1Q14993 1142 aa13.63□□□□□ -0.23
SLIRP-211ENST00000557623 POSTNQ15063 836 aa13.63□□□□□ -0.23
SLIRP-211ENST00000557623 SYCP3Q8IZU3 236 aa13.63□□□□□ -0.23
SLIRP-211ENST00000557623 EFHBQ8N7U6 833 aa13.63□□□□□ -0.23
SLIRP-211ENST00000557623 MRPL43Q8N983 215 aaKnown RBP13.63□□□□□ -0.23
SLIRP-211ENST00000557623 TMEM87AQ8NBN3 555 aa13.63□□□□□ -0.23
SLIRP-211ENST00000557623 BCL7CQ8WUZ0 217 aaPredicted RBP13.63□□□□□ -0.23
SLIRP-211ENST00000557623 SNX27Q96L92 541 aa13.63□□□□□ -0.23
SLIRP-211ENST00000557623 UROC1Q96N76 676 aa13.63□□□□□ -0.23
SLIRP-211ENST00000557623 PPP1R10Q96QC0 940 aaKnown RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms