RNA–Protein interactions for RNA: ENST00000557466.1

VIPAS39-210, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-210ENST00000557466 ISM2Q6H9L7 571 aa16.18■□□□□ 0.18
VIPAS39-210ENST00000557466 CRELD2Q6UXH1 353 aaPredicted RBP16.18■□□□□ 0.18
VIPAS39-210ENST00000557466 ALKAL1Q6UXT8 129 aa16.18■□□□□ 0.18
VIPAS39-210ENST00000557466 HS2ST1Q7LGA3 356 aa16.18■□□□□ 0.18
VIPAS39-210ENST00000557466 COLGALT2Q8IYK4 626 aa16.18■□□□□ 0.18
VIPAS39-210ENST00000557466 GUF1Q8N442 669 aaKnown RBP16.18■□□□□ 0.18
VIPAS39-210ENST00000557466 DEFB123Q8N688 67 aa16.18■□□□□ 0.18
VIPAS39-210ENST00000557466 GDPD5Q8WTR4 605 aa16.18■□□□□ 0.18
VIPAS39-210ENST00000557466 ZNF558Q96NG5 402 aa16.18■□□□□ 0.18
VIPAS39-210ENST00000557466 PRDM12Q9H4Q4 367 aa16.18■□□□□ 0.18
VIPAS39-210ENST00000557466 RPF1Q9H9Y2 349 aaKnown RBP16.18■□□□□ 0.18
VIPAS39-210ENST00000557466 CNTN3Q9P232 1028 aa16.18■□□□□ 0.18
VIPAS39-210ENST00000557466 MYO9BQ13459 2157 aa16.17■□□□□ 0.18
VIPAS39-210ENST00000557466 TTC26A0AVF1 554 aa16.17■□□□□ 0.18
VIPAS39-210ENST00000557466 BIN1O00499 593 aa16.17■□□□□ 0.18
VIPAS39-210ENST00000557466 KIF20AO95235 890 aa16.17■□□□□ 0.18
VIPAS39-210ENST00000557466 MBD3O95983 291 aa16.17■□□□□ 0.18
VIPAS39-210ENST00000557466 SLC11A1P49279 550 aa16.17■□□□□ 0.18
VIPAS39-210ENST00000557466 BCAR1P56945 870 aa16.17■□□□□ 0.18
VIPAS39-210ENST00000557466 SNRPFP62306 86 aaKnown RBP16.17■□□□□ 0.18
VIPAS39-210ENST00000557466 PPP2R3AQ06190 1150 aa16.17■□□□□ 0.18
VIPAS39-210ENST00000557466 MORC3Q14149 939 aa16.17■□□□□ 0.18
VIPAS39-210ENST00000557466 KCNT2Q6UVM3 1135 aa16.17■□□□□ 0.18
VIPAS39-210ENST00000557466 C12orf56Q8IXR9 622 aa16.17■□□□□ 0.18
VIPAS39-210ENST00000557466 GPD1LQ8N335 351 aa16.17■□□□□ 0.18
VIPAS39-210ENST00000557466 ZMAT2Q96NC0 199 aaKnown RBP16.17■□□□□ 0.18
VIPAS39-210ENST00000557466 GUCD1Q96NT3 240 aa16.17■□□□□ 0.18
VIPAS39-210ENST00000557466 FAM193BQ96PV7 902 aaPredicted RBP16.17■□□□□ 0.18
VIPAS39-210ENST00000557466 PPP1R10Q96QC0 940 aaKnown RBP16.17■□□□□ 0.18
VIPAS39-210ENST00000557466 FAM213AQ9BRX8 229 aa16.17■□□□□ 0.18
VIPAS39-210ENST00000557466 PLVAPQ9BX97 442 aa16.17■□□□□ 0.18
VIPAS39-210ENST00000557466 AAASQ9NRG9 546 aa16.17■□□□□ 0.18
VIPAS39-210ENST00000557466 HSPBP1Q9NZL4 362 aa16.17■□□□□ 0.18
VIPAS39-210ENST00000557466 KIAA1468Q9P260 1216 aa16.17■□□□□ 0.18
VIPAS39-210ENST00000557466 CACNG4Q9UBN1 327 aa16.17■□□□□ 0.18
VIPAS39-210ENST00000557466 SMIM28A0A1B0GU29 152 aa16.16■□□□□ 0.18
VIPAS39-210ENST00000557466 LACTBL1A8MY62 500 aa16.16■□□□□ 0.18
VIPAS39-210ENST00000557466 NT5C1B-RDH14C9J2C7 533 aa16.16■□□□□ 0.18
VIPAS39-210ENST00000557466 PDXKO00764 312 aa16.16■□□□□ 0.18
VIPAS39-210ENST00000557466 KIAA0391O15091 583 aaKnown RBP16.16■□□□□ 0.18
VIPAS39-210ENST00000557466 EXTL3O43909 919 aa16.16■□□□□ 0.18
VIPAS39-210ENST00000557466 LPXNO60711 386 aa16.16■□□□□ 0.18
VIPAS39-210ENST00000557466 RB1P06400 928 aa16.16■□□□□ 0.18
VIPAS39-210ENST00000557466 THP07101 528 aa16.16■□□□□ 0.18
VIPAS39-210ENST00000557466 ADRB2P07550 413 aa16.16■□□□□ 0.18
VIPAS39-210ENST00000557466 KCNE1P15382 129 aa16.16■□□□□ 0.18
VIPAS39-210ENST00000557466 BMP6P22004 513 aa16.16■□□□□ 0.18
VIPAS39-210ENST00000557466 PRCPP42785 496 aa16.16■□□□□ 0.18
VIPAS39-210ENST00000557466 CYP2J2P51589 502 aa16.16■□□□□ 0.18
VIPAS39-210ENST00000557466 SPAG1Q07617 926 aa16.16■□□□□ 0.18
VIPAS39-210ENST00000557466 TUSC3Q13454 348 aa16.16■□□□□ 0.18
VIPAS39-210ENST00000557466 GPM6BQ13491 265 aa16.16■□□□□ 0.18
VIPAS39-210ENST00000557466 COBLL1Q53SF7 1204 aa16.16■□□□□ 0.18
VIPAS39-210ENST00000557466 TMEM173Q86WV6 379 aaPredicted RBP16.16■□□□□ 0.18
VIPAS39-210ENST00000557466 SLC39A11Q8N1S5 342 aa16.16■□□□□ 0.18
VIPAS39-210ENST00000557466 KLHL23Q8NBE8 558 aa16.16■□□□□ 0.18
VIPAS39-210ENST00000557466 NOC3LQ8WTT2 800 aaKnown RBP16.16■□□□□ 0.18
VIPAS39-210ENST00000557466 BCL7CQ8WUZ0 217 aaPredicted RBP16.16■□□□□ 0.18
VIPAS39-210ENST00000557466 P2RX5Q93086 422 aa16.16■□□□□ 0.18
VIPAS39-210ENST00000557466 TMEM175Q9BSA9 504 aa16.16■□□□□ 0.18
VIPAS39-210ENST00000557466 C11orf84Q9BUA3 381 aaPredicted RBP16.16■□□□□ 0.18
VIPAS39-210ENST00000557466 PLEKHA5Q9HAU0 1116 aa16.16■□□□□ 0.18
VIPAS39-210ENST00000557466 MTMR10Q9NXD2 777 aa16.16■□□□□ 0.18
VIPAS39-210ENST00000557466 CGNQ9P2M7 1197 aaKnown RBP16.16■□□□□ 0.18
VIPAS39-210ENST00000557466 PCDHB12Q9Y5F1 795 aa16.16■□□□□ 0.18
VIPAS39-210ENST00000557466 CASTOR2A6NHX0 329 aa16.15■□□□□ 0.18
VIPAS39-210ENST00000557466 H3BNC9 293 aa16.15■□□□□ 0.18
VIPAS39-210ENST00000557466 FGF18O76093 207 aa16.15■□□□□ 0.18
VIPAS39-210ENST00000557466 LDHAP00338 332 aaKnown RBP16.15■□□□□ 0.18
VIPAS39-210ENST00000557466 ITGB1P05556 798 aa16.15■□□□□ 0.18
VIPAS39-210ENST00000557466 GALTP07902 379 aa16.15■□□□□ 0.18
VIPAS39-210ENST00000557466 CD44P16070 742 aaKnown RBP16.15■□□□□ 0.18
VIPAS39-210ENST00000557466 WNT7BP56706 349 aa16.15■□□□□ 0.18
VIPAS39-210ENST00000557466 SOX4Q06945 474 aaPredicted RBP16.15■□□□□ 0.18
VIPAS39-210ENST00000557466 ZCWPW2Q504Y3 356 aa16.15■□□□□ 0.18
VIPAS39-210ENST00000557466 CBWD2Q8IUF1 395 aa16.15■□□□□ 0.18
VIPAS39-210ENST00000557466 BRSK2Q8IWQ3 736 aa16.15■□□□□ 0.18
VIPAS39-210ENST00000557466 GOLGA5Q8TBA6 731 aa16.15■□□□□ 0.18
VIPAS39-210ENST00000557466 FAM212AQ96EL1 285 aa16.15■□□□□ 0.18
VIPAS39-210ENST00000557466 PAAF1Q9BRP4 392 aa16.15■□□□□ 0.18
VIPAS39-210ENST00000557466 GTPBP4Q9BZE4 634 aaKnown RBP16.15■□□□□ 0.18
VIPAS39-210ENST00000557466 GOLGA2P5Q9HBQ8 144 aa16.15■□□□□ 0.18
VIPAS39-210ENST00000557466 MARCH5Q9NX47 278 aa16.15■□□□□ 0.18
VIPAS39-210ENST00000557466 TRAF3IP3Q9Y228 551 aa16.15■□□□□ 0.18
VIPAS39-210ENST00000557466 PRG3Q9Y2Y8 225 aaPredicted RBP16.15■□□□□ 0.18
VIPAS39-210ENST00000557466 F8W810 466 aa16.14■□□□□ 0.17
VIPAS39-210ENST00000557466 NRP1O14786 923 aa16.14■□□□□ 0.17
VIPAS39-210ENST00000557466 GRM6O15303 877 aa16.14■□□□□ 0.17
VIPAS39-210ENST00000557466 NR3C1P04150 777 aa16.14■□□□□ 0.17
VIPAS39-210ENST00000557466 NFICP08651 508 aa16.14■□□□□ 0.17
VIPAS39-210ENST00000557466 PPM1AP35813 382 aa16.14■□□□□ 0.17
VIPAS39-210ENST00000557466 OR1G1P47890 313 aa16.14■□□□□ 0.17
VIPAS39-210ENST00000557466 ALDH7A1P49419 539 aaKnown RBP16.14■□□□□ 0.17
VIPAS39-210ENST00000557466 POU5F1Q01860 360 aaKnown RBP16.14■□□□□ 0.17
VIPAS39-210ENST00000557466 ADGRE1Q14246 886 aa16.14■□□□□ 0.17
VIPAS39-210ENST00000557466 JADE1Q6IE81 842 aa16.14■□□□□ 0.17
VIPAS39-210ENST00000557466 ADSSL1Q8N142 457 aa16.14■□□□□ 0.17
VIPAS39-210ENST00000557466 TMEM130Q8N3G9 435 aa16.14■□□□□ 0.17
VIPAS39-210ENST00000557466 TRIML1Q8N9V2 468 aa16.14■□□□□ 0.17
VIPAS39-210ENST00000557466 XXYLT1Q8NBI6 393 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms