RNA–Protein interactions for RNA: ENST00000557442.5

HNRNPC-232, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 1,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-232ENST00000557442 THP07101 528 aa11.55□□□□□ -0.56
HNRNPC-232ENST00000557442 GALTP07902 379 aa11.55□□□□□ -0.56
HNRNPC-232ENST00000557442 CXCL8P10145 99 aa11.55□□□□□ -0.56
HNRNPC-232ENST00000557442 POU3F3P20264 500 aaPredicted RBP11.55□□□□□ -0.56
HNRNPC-232ENST00000557442 TNFSF9P41273 254 aa11.55□□□□□ -0.56
HNRNPC-232ENST00000557442 OR1G1P47890 313 aa11.55□□□□□ -0.56
HNRNPC-232ENST00000557442 KRT17Q04695 432 aa11.55□□□□□ -0.56
HNRNPC-232ENST00000557442 DSC1Q08554 894 aa11.55□□□□□ -0.56
HNRNPC-232ENST00000557442 DPYDQ12882 1025 aa11.55□□□□□ -0.56
HNRNPC-232ENST00000557442 SNW1Q13573 536 aaKnown RBP11.55□□□□□ -0.56
HNRNPC-232ENST00000557442 POSTNQ15063 836 aa11.55□□□□□ -0.56
HNRNPC-232ENST00000557442 CCDC85BQ15834 202 aaPredicted RBP11.55□□□□□ -0.56
HNRNPC-232ENST00000557442 KYAT1Q16773 422 aa11.55□□□□□ -0.56
HNRNPC-232ENST00000557442 KMT5BQ4FZB7 885 aa11.55□□□□□ -0.56
HNRNPC-232ENST00000557442 TIGD5Q53EQ6 642 aa11.55□□□□□ -0.56
HNRNPC-232ENST00000557442 ZBTB41Q5SVQ8 909 aa11.55□□□□□ -0.56
HNRNPC-232ENST00000557442 EPM2AIP1Q7L775 607 aaPredicted RBP11.55□□□□□ -0.56
HNRNPC-232ENST00000557442 TMEM173Q86WV6 379 aaPredicted RBP11.55□□□□□ -0.56
HNRNPC-232ENST00000557442 COLGALT2Q8IYK4 626 aa11.55□□□□□ -0.56
HNRNPC-232ENST00000557442 ENGASEQ8NFI3 743 aa11.55□□□□□ -0.56
HNRNPC-232ENST00000557442 SPPL3Q8TCT6 385 aa11.55□□□□□ -0.56
HNRNPC-232ENST00000557442 POF1BQ8WVV4 589 aa11.55□□□□□ -0.56
HNRNPC-232ENST00000557442 PPM1EQ8WY54 764 aa11.55□□□□□ -0.56
HNRNPC-232ENST00000557442 TLR9Q9NR96 1032 aa11.55□□□□□ -0.56
HNRNPC-232ENST00000557442 LMCD1Q9NZU5 365 aa11.55□□□□□ -0.56
HNRNPC-232ENST00000557442 PRG3Q9Y2Y8 225 aaPredicted RBP11.55□□□□□ -0.56
HNRNPC-232ENST00000557442 CASTOR2A6NHX0 329 aa11.54□□□□□ -0.56
HNRNPC-232ENST00000557442 FAM189A1O60320 539 aa11.54□□□□□ -0.56
HNRNPC-232ENST00000557442 SLC34A2O95436 690 aa11.54□□□□□ -0.56
HNRNPC-232ENST00000557442 CLTAP09496 248 aa11.54□□□□□ -0.56
HNRNPC-232ENST00000557442 DNAJB1P25685 340 aa11.54□□□□□ -0.56
HNRNPC-232ENST00000557442 UBE2HP62256 183 aa11.54□□□□□ -0.56
HNRNPC-232ENST00000557442 PLCB3Q01970 1234 aa11.54□□□□□ -0.56
HNRNPC-232ENST00000557442 UBE3AQ05086 875 aa11.54□□□□□ -0.56
HNRNPC-232ENST00000557442 PPP2R3AQ06190 1150 aa11.54□□□□□ -0.56
HNRNPC-232ENST00000557442 TUSC3Q13454 348 aa11.54□□□□□ -0.56
HNRNPC-232ENST00000557442 PNOCQ13519 176 aa11.54□□□□□ -0.56
HNRNPC-232ENST00000557442 NELFCDQ8IXH7 590 aa11.54□□□□□ -0.56
HNRNPC-232ENST00000557442 KIAA0895Q8NCT3 520 aa11.54□□□□□ -0.56
HNRNPC-232ENST00000557442 NOC3LQ8WTT2 800 aaKnown RBP11.54□□□□□ -0.56
HNRNPC-232ENST00000557442 BCL7CQ8WUZ0 217 aaPredicted RBP11.54□□□□□ -0.56
HNRNPC-232ENST00000557442 SCFD1Q8WVM8 642 aa11.54□□□□□ -0.56
HNRNPC-232ENST00000557442 IGSF21Q96ID5 467 aa11.54□□□□□ -0.56
HNRNPC-232ENST00000557442 CNTN3Q9P232 1028 aa11.54□□□□□ -0.56
HNRNPC-232ENST00000557442 CACNG4Q9UBN1 327 aa11.54□□□□□ -0.56
HNRNPC-232ENST00000557442 PUF60Q9UHX1 559 aaKnown RBP11.54□□□□□ -0.56
HNRNPC-232ENST00000557442 HOOK1Q9UJC3 728 aaKnown RBP11.54□□□□□ -0.56
HNRNPC-232ENST00000557442 AGO2Q9UKV8 859 aaKnown RBP11.54□□□□□ -0.56
HNRNPC-232ENST00000557442 LZTS1Q9Y250 596 aa11.54□□□□□ -0.56
HNRNPC-232ENST00000557442 FAN1Q9Y2M0 1017 aa11.54□□□□□ -0.56
HNRNPC-232ENST00000557442 STYXL1Q9Y6J8 313 aa11.54□□□□□ -0.56
HNRNPC-232ENST00000557442 C2orf16Q68DN1 1984 aa11.53□□□□□ -0.56
HNRNPC-232ENST00000557442 TCF20Q9UGU0 1960 aaKnown RBP11.53□□□□□ -0.56
HNRNPC-232ENST00000557442 SMIM28A0A1B0GU29 152 aa11.53□□□□□ -0.56
HNRNPC-232ENST00000557442 NRP1O14786 923 aa11.53□□□□□ -0.56
HNRNPC-232ENST00000557442 MEFVO15553 781 aaPredicted RBP11.53□□□□□ -0.56
HNRNPC-232ENST00000557442 PRPF40AO75400 957 aaKnown RBP11.53□□□□□ -0.56
HNRNPC-232ENST00000557442 ALDH2P05091 517 aa11.53□□□□□ -0.56
HNRNPC-232ENST00000557442 ADSSP30520 456 aa11.53□□□□□ -0.56
HNRNPC-232ENST00000557442 HOXD13P35453 343 aa11.53□□□□□ -0.56
HNRNPC-232ENST00000557442 ACOT2P49753 483 aa11.53□□□□□ -0.56
HNRNPC-232ENST00000557442 STK4Q13043 487 aa11.53□□□□□ -0.56
HNRNPC-232ENST00000557442 PSMD2Q13200 908 aa11.53□□□□□ -0.56
HNRNPC-232ENST00000557442 CAMK1Q14012 370 aa11.53□□□□□ -0.56
HNRNPC-232ENST00000557442 ENOX2Q16206 610 aaKnown RBP11.53□□□□□ -0.56
HNRNPC-232ENST00000557442 SLC10A6Q3KNW5 377 aa11.53□□□□□ -0.56
HNRNPC-232ENST00000557442 ARMCX5Q6P1M9 558 aa11.53□□□□□ -0.56
HNRNPC-232ENST00000557442 ALKAL1Q6UXT8 129 aa11.53□□□□□ -0.56
HNRNPC-232ENST00000557442 ZNF507Q8TCN5 953 aa11.53□□□□□ -0.56
HNRNPC-232ENST00000557442 RABGGTAQ92696 567 aa11.53□□□□□ -0.56
HNRNPC-232ENST00000557442 FAM212AQ96EL1 285 aa11.53□□□□□ -0.56
HNRNPC-232ENST00000557442 SAAL1Q96ER3 474 aa11.53□□□□□ -0.56
HNRNPC-232ENST00000557442 TIGD1Q96MW7 591 aa11.53□□□□□ -0.56
HNRNPC-232ENST00000557442 GBP4Q96PP9 640 aa11.53□□□□□ -0.56
HNRNPC-232ENST00000557442 PPP1R10Q96QC0 940 aaKnown RBP11.53□□□□□ -0.56
HNRNPC-232ENST00000557442 TCF25Q9BQ70 676 aa11.53□□□□□ -0.56
HNRNPC-232ENST00000557442 CBWD1Q9BRT8 395 aa11.53□□□□□ -0.56
HNRNPC-232ENST00000557442 NSUN3Q9H649 340 aaKnown RBP11.53□□□□□ -0.56
HNRNPC-232ENST00000557442 RPF1Q9H9Y2 349 aaKnown RBP11.53□□□□□ -0.56
HNRNPC-232ENST00000557442 ENTPD7Q9NQZ7 604 aa11.53□□□□□ -0.56
HNRNPC-232ENST00000557442 SLC38A7Q9NVC3 462 aa11.53□□□□□ -0.56
HNRNPC-232ENST00000557442 MARCH5Q9NX47 278 aa11.53□□□□□ -0.56
HNRNPC-232ENST00000557442 XIRP2A4UGR9 3374 aa11.53□□□□□ -0.56
HNRNPC-232ENST00000557442 TTC26A0AVF1 554 aa11.52□□□□□ -0.57
HNRNPC-232ENST00000557442 F8W810 466 aa11.52□□□□□ -0.57
HNRNPC-232ENST00000557442 RHOBTB3O94955 611 aa11.52□□□□□ -0.57
HNRNPC-232ENST00000557442 KCNE1P15382 129 aa11.52□□□□□ -0.57
HNRNPC-232ENST00000557442 GARTP22102 1010 aa11.52□□□□□ -0.57
HNRNPC-232ENST00000557442 CA8P35219 290 aa11.52□□□□□ -0.57
HNRNPC-232ENST00000557442 IRS1P35568 1242 aa11.52□□□□□ -0.57
HNRNPC-232ENST00000557442 SPAG1Q07617 926 aa11.52□□□□□ -0.57
HNRNPC-232ENST00000557442 HSP90AA2PQ14568 343 aaPredicted RBP11.52□□□□□ -0.57
HNRNPC-232ENST00000557442 KCNB1Q14721 858 aa11.52□□□□□ -0.57
HNRNPC-232ENST00000557442 SKIV2LQ15477 1246 aaKnown RBP11.52□□□□□ -0.57
HNRNPC-232ENST00000557442 NAB2Q15742 525 aa11.52□□□□□ -0.57
HNRNPC-232ENST00000557442 BMT2Q1RMZ1 405 aa11.52□□□□□ -0.57
HNRNPC-232ENST00000557442 XKR4Q5GH76 650 aa11.52□□□□□ -0.57
HNRNPC-232ENST00000557442 PLPP4Q5VZY2 271 aa11.52□□□□□ -0.57
HNRNPC-232ENST00000557442 CLEC17AQ6ZS10 378 aa11.52□□□□□ -0.57
HNRNPC-232ENST00000557442 HS2ST1Q7LGA3 356 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms