RNA–Protein interactions for RNA: ENST00000556098.1

CHGA-205, Transcript of chromogranin A, humanhuman

TSL 3

Gene CHGA, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-205ENST00000556098 UBASH3AP57075 661 aa12.15□□□□□ -0.46
CHGA-205ENST00000556098 RNASELQ05823 741 aaKnown RBP12.15□□□□□ -0.46
CHGA-205ENST00000556098 LRRC63Q05C16 580 aa12.15□□□□□ -0.46
CHGA-205ENST00000556098 EHHADHQ08426 723 aa12.15□□□□□ -0.46
CHGA-205ENST00000556098 MCM6Q14566 821 aa12.15□□□□□ -0.46
CHGA-205ENST00000556098 DSC3Q14574 896 aa12.15□□□□□ -0.46
CHGA-205ENST00000556098 CDKAL1Q5VV42 579 aa12.15□□□□□ -0.46
CHGA-205ENST00000556098 EFCAB12Q6NXP0 572 aa12.15□□□□□ -0.46
CHGA-205ENST00000556098 ABHD15Q6UXT9 468 aa12.15□□□□□ -0.46
CHGA-205ENST00000556098 PPP4R3CPQ6ZMV5 832 aa12.15□□□□□ -0.46
CHGA-205ENST00000556098 CATSPER3Q86XQ3 398 aa12.15□□□□□ -0.46
CHGA-205ENST00000556098 ZDHHC14Q8IZN3 488 aa12.15□□□□□ -0.46
CHGA-205ENST00000556098 NLRP7Q8WX94 980 aa12.15□□□□□ -0.46
CHGA-205ENST00000556098 LPPQ93052 612 aa12.15□□□□□ -0.46
CHGA-205ENST00000556098 NACC1Q96RE7 527 aa12.15□□□□□ -0.46
CHGA-205ENST00000556098 HSD17B14Q9BPX1 270 aa12.15□□□□□ -0.46
CHGA-205ENST00000556098 EIF2AK1Q9BQI3 630 aaKnown RBP12.15□□□□□ -0.46
CHGA-205ENST00000556098 TIPINQ9BVW5 301 aa12.15□□□□□ -0.46
CHGA-205ENST00000556098 HSD3B7Q9H2F3 369 aa12.15□□□□□ -0.46
CHGA-205ENST00000556098 CYP26B1Q9NR63 512 aa12.15□□□□□ -0.46
CHGA-205ENST00000556098 DZANK1Q9NVP4 752 aa12.15□□□□□ -0.46
CHGA-205ENST00000556098 GABBR1Q9UBS5 961 aa12.15□□□□□ -0.46
CHGA-205ENST00000556098 SEL1LQ9UBV2 794 aa12.15□□□□□ -0.46
CHGA-205ENST00000556098 CA14Q9ULX7 337 aa12.15□□□□□ -0.46
CHGA-205ENST00000556098 KIAA1024Q9UPX6 916 aa12.15□□□□□ -0.46
CHGA-205ENST00000556098 FAM186AA6NE01 2351 aa12.15□□□□□ -0.46
CHGA-205ENST00000556098 PTPRZ1P23471 2315 aaPredicted RBP12.15□□□□□ -0.46
CHGA-205ENST00000556098 UBE4BO95155 1302 aa12.14□□□□□ -0.47
CHGA-205ENST00000556098 DOCK8Q8NF50 2099 aa12.14□□□□□ -0.47
CHGA-205ENST00000556098 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.14□□□□□ -0.47
CHGA-205ENST00000556098 MED19A0JLT2 244 aaPredicted RBP12.14□□□□□ -0.47
CHGA-205ENST00000556098 MYMKA6NI61 221 aa12.14□□□□□ -0.47
CHGA-205ENST00000556098 AP5Z1O43299 807 aa12.14□□□□□ -0.47
CHGA-205ENST00000556098 NARSO43776 548 aaKnown RBP12.14□□□□□ -0.47
CHGA-205ENST00000556098 GPR32O75388 356 aa12.14□□□□□ -0.47
CHGA-205ENST00000556098 TPM2P07951 284 aa12.14□□□□□ -0.47
CHGA-205ENST00000556098 ATP4AP20648 1035 aa12.14□□□□□ -0.47
CHGA-205ENST00000556098 TMOD1P28289 359 aa12.14□□□□□ -0.47
CHGA-205ENST00000556098 GBP2P32456 591 aaPredicted RBP12.14□□□□□ -0.47
CHGA-205ENST00000556098 SLC12A3P55017 1021 aa12.14□□□□□ -0.47
CHGA-205ENST00000556098 ISM2Q6H9L7 571 aa12.14□□□□□ -0.47
CHGA-205ENST00000556098 ZNF746Q6NUN9 644 aaPredicted RBP12.14□□□□□ -0.47
CHGA-205ENST00000556098 CCDC149Q6ZUS6 474 aa12.14□□□□□ -0.47
CHGA-205ENST00000556098 DGLUCYQ7Z3D6 616 aa12.14□□□□□ -0.47
CHGA-205ENST00000556098 SMAP1Q8IYB5 467 aaPredicted RBP12.14□□□□□ -0.47
CHGA-205ENST00000556098 DTWD2Q8NBA8 298 aa12.14□□□□□ -0.47
CHGA-205ENST00000556098 NELFBQ8WX92 580 aa12.14□□□□□ -0.47
CHGA-205ENST00000556098 DDX12PQ92771 950 aa12.14□□□□□ -0.47
CHGA-205ENST00000556098 IQCDQ96DY2 449 aa12.14□□□□□ -0.47
CHGA-205ENST00000556098 FANCLQ9NW38 375 aa12.14□□□□□ -0.47
CHGA-205ENST00000556098 ODF2LQ9ULJ1 636 aa12.14□□□□□ -0.47
CHGA-205ENST00000556098 CTNND2Q9UQB3 1225 aa12.14□□□□□ -0.47
CHGA-205ENST00000556098 VPS13AQ96RL7 3174 aa12.14□□□□□ -0.47
CHGA-205ENST00000556098 DOCK6Q96HP0 2047 aa12.14□□□□□ -0.47
CHGA-205ENST00000556098 LRRC10BA6NIK2 292 aa12.13□□□□□ -0.47
CHGA-205ENST00000556098 WDR64B1ANS9 1081 aa12.13□□□□□ -0.47
CHGA-205ENST00000556098 ZBTB42B2RXF5 422 aa12.13□□□□□ -0.47
CHGA-205ENST00000556098 C2CD2LO14523 706 aa12.13□□□□□ -0.47
CHGA-205ENST00000556098 CHMP2AO43633 222 aa12.13□□□□□ -0.47
CHGA-205ENST00000556098 MED24O75448 989 aa12.13□□□□□ -0.47
CHGA-205ENST00000556098 ATG7O95352 703 aa12.13□□□□□ -0.47
CHGA-205ENST00000556098 P4HBP07237 508 aaKnown RBP12.13□□□□□ -0.47
CHGA-205ENST00000556098 PSAPP07602 524 aa12.13□□□□□ -0.47
CHGA-205ENST00000556098 SPATA31C1P0DKV0 1188 aa12.13□□□□□ -0.47
CHGA-205ENST00000556098 AOC1P19801 751 aa12.13□□□□□ -0.47
CHGA-205ENST00000556098 KLRC2P26717 231 aa12.13□□□□□ -0.47
CHGA-205ENST00000556098 PRCPP42785 496 aa12.13□□□□□ -0.47
CHGA-205ENST00000556098 FAM189BP81408 668 aa12.13□□□□□ -0.47
CHGA-205ENST00000556098 TDGQ13569 410 aa12.13□□□□□ -0.47
CHGA-205ENST00000556098 FAM26FQ5R3K3 315 aa12.13□□□□□ -0.47
CHGA-205ENST00000556098 STXBP4Q6ZWJ1 553 aa12.13□□□□□ -0.47
CHGA-205ENST00000556098 GPBP1Q86WP2 473 aa12.13□□□□□ -0.47
CHGA-205ENST00000556098 TMEM173Q86WV6 379 aaPredicted RBP12.13□□□□□ -0.47
CHGA-205ENST00000556098 CCDC105Q8IYK2 499 aa12.13□□□□□ -0.47
CHGA-205ENST00000556098 CCDC112Q8NEF3 446 aa12.13□□□□□ -0.47
CHGA-205ENST00000556098 BBXQ8WY36 941 aaPredicted RBP12.13□□□□□ -0.47
CHGA-205ENST00000556098 STAMQ92783 540 aa12.13□□□□□ -0.47
CHGA-205ENST00000556098 DNAJC19Q96DA6 116 aa12.13□□□□□ -0.47
CHGA-205ENST00000556098 TSG101Q99816 390 aa12.13□□□□□ -0.47
CHGA-205ENST00000556098 MRPL9Q9BYD2 267 aaKnown RBP12.13□□□□□ -0.47
CHGA-205ENST00000556098 XPO4Q9C0E2 1151 aaKnown RBP12.13□□□□□ -0.47
CHGA-205ENST00000556098 ZBP1Q9H171 429 aa12.13□□□□□ -0.47
CHGA-205ENST00000556098 ZSWIM4Q9H7M6 989 aa12.13□□□□□ -0.47
CHGA-205ENST00000556098 SFXN1Q9H9B4 322 aa12.13□□□□□ -0.47
CHGA-205ENST00000556098 IFNKQ9P0W0 207 aa12.13□□□□□ -0.47
CHGA-205ENST00000556098 MAGEC2Q9UBF1 373 aaPredicted RBP12.13□□□□□ -0.47
CHGA-205ENST00000556098 CACNA1HO95180 2353 aa12.12□□□□□ -0.47
CHGA-205ENST00000556098 RALGAPA1Q6GYQ0 2036 aa12.12□□□□□ -0.47
CHGA-205ENST00000556098 A0A087WWV3 80 aa12.12□□□□□ -0.47
CHGA-205ENST00000556098 IGKV6D-21A0A0A0MT36 114 aa12.12□□□□□ -0.47
CHGA-205ENST00000556098 A0A1B0GTH6 734 aa12.12□□□□□ -0.47
CHGA-205ENST00000556098 ZNF500O60304 480 aaPredicted RBP12.12□□□□□ -0.47
CHGA-205ENST00000556098 KRT18P05783 430 aaKnown RBP12.12□□□□□ -0.47
CHGA-205ENST00000556098 CD44P16070 742 aaKnown RBP12.12□□□□□ -0.47
CHGA-205ENST00000556098 CYP11B2P19099 503 aa12.12□□□□□ -0.47
CHGA-205ENST00000556098 ABCD1P33897 745 aa12.12□□□□□ -0.47
CHGA-205ENST00000556098 ALCAMQ13740 583 aa12.12□□□□□ -0.47
CHGA-205ENST00000556098 TRIM14Q14142 442 aa12.12□□□□□ -0.47
CHGA-205ENST00000556098 TWF2Q6IBS0 349 aaKnown RBP12.12□□□□□ -0.47
CHGA-205ENST00000556098 CENPPQ6IPU0 288 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms