RNA–Protein interactions for RNA: ENST00000554947.5

SDR39U1-209, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 1,203 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-209ENST00000554947 GARTP22102 1010 aa26.43■■□□□ 1.82
SDR39U1-209ENST00000554947 SLC11A1P49279 550 aa26.43■■□□□ 1.82
SDR39U1-209ENST00000554947 OSTNP61366 133 aa26.43■■□□□ 1.82
SDR39U1-209ENST00000554947 SNRPFP62306 86 aaKnown RBP26.43■■□□□ 1.82
SDR39U1-209ENST00000554947 TUSC3Q13454 348 aa26.43■■□□□ 1.82
SDR39U1-209ENST00000554947 KCNB1Q14721 858 aa26.43■■□□□ 1.82
SDR39U1-209ENST00000554947 PDE12Q6L8Q7 609 aaKnown RBP26.43■■□□□ 1.82
SDR39U1-209ENST00000554947 POF1BQ8WVV4 589 aa26.43■■□□□ 1.82
SDR39U1-209ENST00000554947 IGSF21Q96ID5 467 aa26.43■■□□□ 1.82
SDR39U1-209ENST00000554947 TSPAN18Q96SJ8 248 aa26.43■■□□□ 1.82
SDR39U1-209ENST00000554947 PUF60Q9UHX1 559 aaKnown RBP26.43■■□□□ 1.82
SDR39U1-209ENST00000554947 FAN1Q9Y2M0 1017 aa26.43■■□□□ 1.82
SDR39U1-209ENST00000554947 GTF3C5Q9Y5Q8 519 aaPredicted RBP26.43■■□□□ 1.82
SDR39U1-209ENST00000554947 KIAA0391O15091 583 aaKnown RBP26.42■■□□□ 1.82
SDR39U1-209ENST00000554947 GADD45BO75293 160 aaPredicted RBP26.42■■□□□ 1.82
SDR39U1-209ENST00000554947 RHOBTB3O94955 611 aa26.42■■□□□ 1.82
SDR39U1-209ENST00000554947 ADRB2P07550 413 aa26.42■■□□□ 1.82
SDR39U1-209ENST00000554947 PRR29P0C7W0 189 aa26.42■■□□□ 1.82
SDR39U1-209ENST00000554947 ADSSP30520 456 aa26.42■■□□□ 1.82
SDR39U1-209ENST00000554947 NAB2Q15742 525 aa26.42■■□□□ 1.82
SDR39U1-209ENST00000554947 TIGD5Q53EQ6 642 aa26.42■■□□□ 1.82
SDR39U1-209ENST00000554947 GLIS3Q8NEA6 775 aa26.42■■□□□ 1.82
SDR39U1-209ENST00000554947 SCFD1Q8WVM8 642 aa26.42■■□□□ 1.82
SDR39U1-209ENST00000554947 POMGNT1Q8WZA1 660 aa26.42■■□□□ 1.82
SDR39U1-209ENST00000554947 TMEM169Q96HH4 297 aa26.42■■□□□ 1.82
SDR39U1-209ENST00000554947 PPP1R10Q96QC0 940 aaKnown RBP26.42■■□□□ 1.82
SDR39U1-209ENST00000554947 AGO2Q9UKV8 859 aaKnown RBP26.42■■□□□ 1.82
SDR39U1-209ENST00000554947 SMIM28A0A1B0GU29 152 aa26.41■■□□□ 1.82
SDR39U1-209ENST00000554947 PBX3P40426 434 aa26.41■■□□□ 1.82
SDR39U1-209ENST00000554947 CAMK1Q14012 370 aa26.41■■□□□ 1.82
SDR39U1-209ENST00000554947 SLC10A6Q3KNW5 377 aa26.41■■□□□ 1.82
SDR39U1-209ENST00000554947 CD302Q8IX05 232 aa26.41■■□□□ 1.82
SDR39U1-209ENST00000554947 MAFAQ8NHW3 353 aaPredicted RBP26.41■■□□□ 1.82
SDR39U1-209ENST00000554947 SLC39A2Q9NP94 309 aa26.41■■□□□ 1.82
SDR39U1-209ENST00000554947 SLC38A7Q9NVC3 462 aa26.41■■□□□ 1.82
SDR39U1-209ENST00000554947 CGNQ9P2M7 1197 aaKnown RBP26.41■■□□□ 1.82
SDR39U1-209ENST00000554947 CPSF3Q9UKF6 684 aaKnown RBP26.41■■□□□ 1.82
SDR39U1-209ENST00000554947 TTC26A0AVF1 554 aa26.4■■□□□ 1.82
SDR39U1-209ENST00000554947 TISP43B9A030 160 aa26.4■■□□□ 1.82
SDR39U1-209ENST00000554947 NRP1O14786 923 aa26.4■■□□□ 1.82
SDR39U1-209ENST00000554947 KINO60870 393 aaKnown RBP26.4■■□□□ 1.82
SDR39U1-209ENST00000554947 LDHAP00338 332 aaKnown RBP26.4■■□□□ 1.82
SDR39U1-209ENST00000554947 HOXD13P35453 343 aa26.4■■□□□ 1.82
SDR39U1-209ENST00000554947 DDX53Q86TM3 631 aaKnown RBP26.4■■□□□ 1.82
SDR39U1-209ENST00000554947 COLEC11Q9BWP8 271 aa26.4■■□□□ 1.82
SDR39U1-209ENST00000554947 RPF1Q9H9Y2 349 aaKnown RBP26.4■■□□□ 1.82
SDR39U1-209ENST00000554947 TLR9Q9NR96 1032 aa26.4■■□□□ 1.82
SDR39U1-209ENST00000554947 NT5C1B-RDH14C9J2C7 533 aa26.39■■□□□ 1.82
SDR39U1-209ENST00000554947 DNAJB1P25685 340 aa26.39■■□□□ 1.82
SDR39U1-209ENST00000554947 OR1G1P47890 313 aa26.39■■□□□ 1.82
SDR39U1-209ENST00000554947 STK4Q13043 487 aa26.39■■□□□ 1.82
SDR39U1-209ENST00000554947 SEZ6Q53EL9 994 aa26.39■■□□□ 1.82
SDR39U1-209ENST00000554947 KIAA0895Q8NCT3 520 aa26.39■■□□□ 1.82
SDR39U1-209ENST00000554947 UROC1Q96N76 676 aa26.39■■□□□ 1.82
SDR39U1-209ENST00000554947 CXCL16Q9H2A7 254 aa26.39■■□□□ 1.82
SDR39U1-209ENST00000554947 MEFVO15553 781 aaPredicted RBP26.38■■□□□ 1.81
SDR39U1-209ENST00000554947 PRPF40AO75400 957 aaKnown RBP26.38■■□□□ 1.81
SDR39U1-209ENST00000554947 KIF20AO95235 890 aa26.38■■□□□ 1.81
SDR39U1-209ENST00000554947 CXCL8P10145 99 aa26.38■■□□□ 1.81
SDR39U1-209ENST00000554947 TNFSF9P41273 254 aa26.38■■□□□ 1.81
SDR39U1-209ENST00000554947 PPP2R3AQ06190 1150 aa26.38■■□□□ 1.81
SDR39U1-209ENST00000554947 ENOX2Q16206 610 aaKnown RBP26.38■■□□□ 1.81
SDR39U1-209ENST00000554947 KNOP1Q1ED39 458 aaKnown RBP26.38■■□□□ 1.81
SDR39U1-209ENST00000554947 GBP4Q96PP9 640 aa26.38■■□□□ 1.81
SDR39U1-209ENST00000554947 GSDMAQ96QA5 445 aa26.38■■□□□ 1.81
SDR39U1-209ENST00000554947 IKZF4Q9H2S9 585 aa26.38■■□□□ 1.81
SDR39U1-209ENST00000554947 NSUN3Q9H649 340 aaKnown RBP26.38■■□□□ 1.81
SDR39U1-209ENST00000554947 FSCN2O14926 492 aa26.37■■□□□ 1.81
SDR39U1-209ENST00000554947 SMC2O95347 1197 aa26.37■■□□□ 1.81
SDR39U1-209ENST00000554947 PNOCQ13519 176 aa26.37■■□□□ 1.81
SDR39U1-209ENST00000554947 BMS1Q14692 1282 aaKnown RBP26.37■■□□□ 1.81
SDR39U1-209ENST00000554947 ZBTB41Q5SVQ8 909 aa26.37■■□□□ 1.81
SDR39U1-209ENST00000554947 ARMCX5Q6P1M9 558 aa26.37■■□□□ 1.81
SDR39U1-209ENST00000554947 TMEM173Q86WV6 379 aaPredicted RBP26.37■■□□□ 1.81
SDR39U1-209ENST00000554947 SPATA20Q8TB22 786 aa26.37■■□□□ 1.81
SDR39U1-209ENST00000554947 ZMAT2Q96NC0 199 aaKnown RBP26.37■■□□□ 1.81
SDR39U1-209ENST00000554947 GTPBP4Q9BZE4 634 aaKnown RBP26.37■■□□□ 1.81
SDR39U1-209ENST00000554947 NGRNQ9NPE2 291 aaKnown RBP26.37■■□□□ 1.81
SDR39U1-209ENST00000554947 RMND1Q9NWS8 449 aa26.37■■□□□ 1.81
SDR39U1-209ENST00000554947 MARCH5Q9NX47 278 aa26.37■■□□□ 1.81
SDR39U1-209ENST00000554947 TGFB1I1O43294 461 aa26.36■■□□□ 1.81
SDR39U1-209ENST00000554947 HSP90AA2PQ14568 343 aaPredicted RBP26.36■■□□□ 1.81
SDR39U1-209ENST00000554947 GLRA4Q5JXX5 417 aa26.36■■□□□ 1.81
SDR39U1-209ENST00000554947 HS2ST1Q7LGA3 356 aa26.36■■□□□ 1.81
SDR39U1-209ENST00000554947 GOLGA5Q8TBA6 731 aa26.36■■□□□ 1.81
SDR39U1-209ENST00000554947 BCL7CQ8WUZ0 217 aaPredicted RBP26.36■■□□□ 1.81
SDR39U1-209ENST00000554947 PPP2R3CQ969Q6 453 aa26.36■■□□□ 1.81
SDR39U1-209ENST00000554947 DDX27Q96GQ7 796 aaKnown RBP26.36■■□□□ 1.81
SDR39U1-209ENST00000554947 ASB7Q9H672 318 aa26.36■■□□□ 1.81
SDR39U1-209ENST00000554947 PRG3Q9Y2Y8 225 aaPredicted RBP26.36■■□□□ 1.81
SDR39U1-209ENST00000554947 DERAQ9Y315 318 aa26.36■■□□□ 1.81
SDR39U1-209ENST00000554947 COL6A3P12111 3177 aa26.36■■□□□ 1.81
SDR39U1-209ENST00000554947 TMEM189-UBE2V1I3L0A0 370 aa26.35■■□□□ 1.81
SDR39U1-209ENST00000554947 EXTL3O43909 919 aa26.35■■□□□ 1.81
SDR39U1-209ENST00000554947 EFEMP2O95967 443 aa26.35■■□□□ 1.81
SDR39U1-209ENST00000554947 ACOT2P49753 483 aa26.35■■□□□ 1.81
SDR39U1-209ENST00000554947 CRELD2Q6UXH1 353 aaPredicted RBP26.35■■□□□ 1.81
SDR39U1-209ENST00000554947 C12orf56Q8IXR9 622 aa26.35■■□□□ 1.81
SDR39U1-209ENST00000554947 TMEM174Q8WUU8 243 aa26.35■■□□□ 1.81
SDR39U1-209ENST00000554947 CBWD1Q9BRT8 395 aa26.35■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms