RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 CHMP5Q9NZZ3 219 aa13.51□□□□□ -0.25
SYNE2-214ENST00000554928 KANSL3Q9P2N6 904 aa13.51□□□□□ -0.25
SYNE2-214ENST00000554928 KCNG1Q9UIX4 513 aa13.51□□□□□ -0.25
SYNE2-214ENST00000554928 A0A0B4J269 797 aa13.5□□□□□ -0.25
SYNE2-214ENST00000554928 SMIM28A0A1B0GU29 152 aa13.5□□□□□ -0.25
SYNE2-214ENST00000554928 LINC01565O15544 149 aa13.5□□□□□ -0.25
SYNE2-214ENST00000554928 ZNF202O95125 648 aa13.5□□□□□ -0.25
SYNE2-214ENST00000554928 WNT7BP56706 349 aa13.5□□□□□ -0.25
SYNE2-214ENST00000554928 AMPD3Q01432 767 aa13.5□□□□□ -0.25
SYNE2-214ENST00000554928 TFF2Q03403 129 aa13.5□□□□□ -0.25
SYNE2-214ENST00000554928 HYAL1Q12794 435 aa13.5□□□□□ -0.25
SYNE2-214ENST00000554928 SNW1Q13573 536 aaKnown RBP13.5□□□□□ -0.25
SYNE2-214ENST00000554928 SKIV2LQ15477 1246 aaKnown RBP13.5□□□□□ -0.25
SYNE2-214ENST00000554928 XKR4Q5GH76 650 aa13.5□□□□□ -0.25
SYNE2-214ENST00000554928 FAM26FQ5R3K3 315 aa13.5□□□□□ -0.25
SYNE2-214ENST00000554928 CD300LGQ6UXG3 332 aa13.5□□□□□ -0.25
SYNE2-214ENST00000554928 KRBA2Q6ZNG9 492 aa13.5□□□□□ -0.25
SYNE2-214ENST00000554928 UNC13DQ70J99 1090 aa13.5□□□□□ -0.25
SYNE2-214ENST00000554928 EPM2AIP1Q7L775 607 aaPredicted RBP13.5□□□□□ -0.25
SYNE2-214ENST00000554928 FMR1NBQ8N0W7 255 aaPredicted RBP13.5□□□□□ -0.25
SYNE2-214ENST00000554928 ENGASEQ8NFI3 743 aa13.5□□□□□ -0.25
SYNE2-214ENST00000554928 HASPINQ8TF76 798 aa13.5□□□□□ -0.25
SYNE2-214ENST00000554928 C18orf25Q96B23 403 aaPredicted RBP13.5□□□□□ -0.25
SYNE2-214ENST00000554928 B3GALT6Q96L58 329 aa13.5□□□□□ -0.25
SYNE2-214ENST00000554928 ACAP3Q96P50 834 aa13.5□□□□□ -0.25
SYNE2-214ENST00000554928 PPP1R10Q96QC0 940 aaKnown RBP13.5□□□□□ -0.25
SYNE2-214ENST00000554928 TMEM175Q9BSA9 504 aa13.5□□□□□ -0.25
SYNE2-214ENST00000554928 MSTO1Q9BUK6 570 aa13.5□□□□□ -0.25
SYNE2-214ENST00000554928 CCDC94Q9BW85 323 aaPredicted RBP13.5□□□□□ -0.25
SYNE2-214ENST00000554928 NSUN3Q9H649 340 aaKnown RBP13.5□□□□□ -0.25
SYNE2-214ENST00000554928 TLR9Q9NR96 1032 aa13.5□□□□□ -0.25
SYNE2-214ENST00000554928 FAN1Q9Y2M0 1017 aa13.5□□□□□ -0.25
SYNE2-214ENST00000554928 XIRP2A4UGR9 3374 aa13.49□□□□□ -0.25
SYNE2-214ENST00000554928 PER2O15055 1255 aa13.49□□□□□ -0.25
SYNE2-214ENST00000554928 EFEMP2O95967 443 aa13.49□□□□□ -0.25
SYNE2-214ENST00000554928 ALDH2P05091 517 aa13.49□□□□□ -0.25
SYNE2-214ENST00000554928 PPM1AP35813 382 aa13.49□□□□□ -0.25
SYNE2-214ENST00000554928 ACOT2P49753 483 aa13.49□□□□□ -0.25
SYNE2-214ENST00000554928 TUSC3Q13454 348 aa13.49□□□□□ -0.25
SYNE2-214ENST00000554928 ENOX2Q16206 610 aaKnown RBP13.49□□□□□ -0.25
SYNE2-214ENST00000554928 CSPP1Q1MSJ5 1256 aa13.49□□□□□ -0.25
SYNE2-214ENST00000554928 KMT5BQ4FZB7 885 aa13.49□□□□□ -0.25
SYNE2-214ENST00000554928 TIGD5Q53EQ6 642 aa13.49□□□□□ -0.25
SYNE2-214ENST00000554928 CRELD2Q6UXH1 353 aaPredicted RBP13.49□□□□□ -0.25
SYNE2-214ENST00000554928 RBM23Q86U06 439 aaKnown RBP13.49□□□□□ -0.25
SYNE2-214ENST00000554928 VPS52Q8N1B4 723 aa13.49□□□□□ -0.25
SYNE2-214ENST00000554928 C3orf58Q8NDZ4 430 aa13.49□□□□□ -0.25
SYNE2-214ENST00000554928 VN1R2Q8NFZ6 395 aa13.49□□□□□ -0.25
SYNE2-214ENST00000554928 SCFD1Q8WVM8 642 aa13.49□□□□□ -0.25
SYNE2-214ENST00000554928 RSPH1Q8WYR4 309 aa13.49□□□□□ -0.25
SYNE2-214ENST00000554928 HVCN1Q96D96 273 aa13.49□□□□□ -0.25
SYNE2-214ENST00000554928 TMEM169Q96HH4 297 aa13.49□□□□□ -0.25
SYNE2-214ENST00000554928 FAM84AQ96KN4 292 aa13.49□□□□□ -0.25
SYNE2-214ENST00000554928 ACCSQ96QU6 501 aa13.49□□□□□ -0.25
SYNE2-214ENST00000554928 TCF25Q9BQ70 676 aa13.49□□□□□ -0.25
SYNE2-214ENST00000554928 CBWD1Q9BRT8 395 aa13.49□□□□□ -0.25
SYNE2-214ENST00000554928 LRRC27Q9C0I9 530 aa13.49□□□□□ -0.25
SYNE2-214ENST00000554928 ZBP1Q9H171 429 aa13.49□□□□□ -0.25
SYNE2-214ENST00000554928 IGFLR1Q9H665 355 aa13.49□□□□□ -0.25
SYNE2-214ENST00000554928 SLC39A2Q9NP94 309 aa13.49□□□□□ -0.25
SYNE2-214ENST00000554928 LZTS1Q9Y250 596 aa13.49□□□□□ -0.25
SYNE2-214ENST00000554928 STYXL1Q9Y6J8 313 aa13.49□□□□□ -0.25
SYNE2-214ENST00000554928 UNC80Q8N2C7 3258 aa13.48□□□□□ -0.25
SYNE2-214ENST00000554928 LACTBL1A8MY62 500 aa13.48□□□□□ -0.25
SYNE2-214ENST00000554928 OGTO15294 1046 aa13.48□□□□□ -0.25
SYNE2-214ENST00000554928 KIF4AO95239 1232 aa13.48□□□□□ -0.25
SYNE2-214ENST00000554928 THP07101 528 aa13.48□□□□□ -0.25
SYNE2-214ENST00000554928 NRIP1P48552 1158 aa13.48□□□□□ -0.25
SYNE2-214ENST00000554928 GUCY2FP51841 1108 aa13.48□□□□□ -0.25
SYNE2-214ENST00000554928 UBE3AQ05086 875 aa13.48□□□□□ -0.25
SYNE2-214ENST00000554928 DLX2Q07687 328 aaPredicted RBP13.48□□□□□ -0.25
SYNE2-214ENST00000554928 DPYDQ12882 1025 aa13.48□□□□□ -0.25
SYNE2-214ENST00000554928 STK4Q13043 487 aa13.48□□□□□ -0.25
SYNE2-214ENST00000554928 DDX53Q86TM3 631 aaKnown RBP13.48□□□□□ -0.25
SYNE2-214ENST00000554928 NELFCDQ8IXH7 590 aa13.48□□□□□ -0.25
SYNE2-214ENST00000554928 KIAA0895Q8NCT3 520 aa13.48□□□□□ -0.25
SYNE2-214ENST00000554928 SLC17A8Q8NDX2 589 aa13.48□□□□□ -0.25
SYNE2-214ENST00000554928 MICAL1Q8TDZ2 1067 aa13.48□□□□□ -0.25
SYNE2-214ENST00000554928 ERCC4Q92889 916 aaPredicted RBP13.48□□□□□ -0.25
SYNE2-214ENST00000554928 SAAL1Q96ER3 474 aa13.48□□□□□ -0.25
SYNE2-214ENST00000554928 PYM1Q9BRP8 204 aaKnown RBP13.48□□□□□ -0.25
SYNE2-214ENST00000554928 GPR62Q9BZJ7 368 aa13.48□□□□□ -0.25
SYNE2-214ENST00000554928 PCIF1Q9H4Z3 704 aa13.48□□□□□ -0.25
SYNE2-214ENST00000554928 CNTN3Q9P232 1028 aa13.48□□□□□ -0.25
SYNE2-214ENST00000554928 TUBGCP4Q9UGJ1 667 aa13.48□□□□□ -0.25
SYNE2-214ENST00000554928 USP25Q9UHP3 1055 aa13.48□□□□□ -0.25
SYNE2-214ENST00000554928 CPSF3Q9UKF6 684 aaKnown RBP13.48□□□□□ -0.25
SYNE2-214ENST00000554928 PCDHB13Q9Y5F0 798 aa13.48□□□□□ -0.25
SYNE2-214ENST00000554928 PVALEFA0A1B0GWK0 134 aa13.47□□□□□ -0.25
SYNE2-214ENST00000554928 TTC26A0AVF1 554 aa13.47□□□□□ -0.25
SYNE2-214ENST00000554928 GOLGA8IPA6NC78 632 aa13.47□□□□□ -0.25
SYNE2-214ENST00000554928 GOLGA8JA6NMD2 632 aa13.47□□□□□ -0.25
SYNE2-214ENST00000554928 TGFB1I1O43294 461 aa13.47□□□□□ -0.25
SYNE2-214ENST00000554928 NR1I2O75469 434 aa13.47□□□□□ -0.25
SYNE2-214ENST00000554928 GLP2RO95838 553 aa13.47□□□□□ -0.25
SYNE2-214ENST00000554928 CLTAP09496 248 aa13.47□□□□□ -0.25
SYNE2-214ENST00000554928 KCNE1P15382 129 aa13.47□□□□□ -0.25
SYNE2-214ENST00000554928 SCP2P22307 547 aa13.47□□□□□ -0.25
SYNE2-214ENST00000554928 LTBRP36941 435 aa13.47□□□□□ -0.25
SYNE2-214ENST00000554928 CLCNKBP51801 687 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms