RNA–Protein interactions for RNA: ENST00000553945.1

NEK9-203, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 786 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-203ENST00000553945 EXOC7Q9UPT5 735 aa25.41■■□□□ 1.66
NEK9-203ENST00000553945 GOLGA6L4A6NEF3 574 aa25.4■■□□□ 1.66
NEK9-203ENST00000553945 CASTOR2A6NHX0 329 aa25.4■■□□□ 1.66
NEK9-203ENST00000553945 TISP43B9A030 160 aa25.4■■□□□ 1.66
NEK9-203ENST00000553945 CA8P35219 290 aa25.4■■□□□ 1.66
NEK9-203ENST00000553945 KCNA1Q09470 495 aa25.4■■□□□ 1.66
NEK9-203ENST00000553945 EP400NLQ6ZTU2 488 aa25.4■■□□□ 1.66
NEK9-203ENST00000553945 UNC13DQ70J99 1090 aa25.4■■□□□ 1.66
NEK9-203ENST00000553945 RBM23Q86U06 439 aaKnown RBP25.4■■□□□ 1.66
NEK9-203ENST00000553945 SYCP3Q8IZU3 236 aa25.4■■□□□ 1.66
NEK9-203ENST00000553945 SNX27Q96L92 541 aa25.4■■□□□ 1.66
NEK9-203ENST00000553945 TLE6Q9H808 572 aa25.4■■□□□ 1.66
NEK9-203ENST00000553945 COG5Q9UP83 839 aa25.4■■□□□ 1.66
NEK9-203ENST00000553945 TRIP11Q15643 1979 aa25.4■■□□□ 1.66
NEK9-203ENST00000553945 CITO14578 2027 aa25.39■■□□□ 1.66
NEK9-203ENST00000553945 A0A0B4J269 797 aa25.39■■□□□ 1.66
NEK9-203ENST00000553945 SMIM28A0A1B0GU29 152 aa25.39■■□□□ 1.66
NEK9-203ENST00000553945 F8W810 466 aa25.39■■□□□ 1.66
NEK9-203ENST00000553945 OGTO15294 1046 aa25.39■■□□□ 1.66
NEK9-203ENST00000553945 PRPF6O94906 941 aaKnown RBP25.39■■□□□ 1.66
NEK9-203ENST00000553945 CLTAP09496 248 aa25.39■■□□□ 1.66
NEK9-203ENST00000553945 GTF2F1P35269 517 aaKnown RBP eCLIP25.39■■□□□ 1.66
NEK9-203ENST00000553945 NRIP1P48552 1158 aa25.39■■□□□ 1.66
NEK9-203ENST00000553945 SMC1AQ14683 1233 aaKnown RBP25.39■■□□□ 1.66
NEK9-203ENST00000553945 BMS1Q14692 1282 aaKnown RBP25.39■■□□□ 1.66
NEK9-203ENST00000553945 NAB2Q15742 525 aa25.39■■□□□ 1.66
NEK9-203ENST00000553945 ALKAL1Q6UXT8 129 aa25.39■■□□□ 1.66
NEK9-203ENST00000553945 STXBP4Q6ZWJ1 553 aa25.39■■□□□ 1.66
NEK9-203ENST00000553945 PPP1R10Q96QC0 940 aaKnown RBP25.39■■□□□ 1.66
NEK9-203ENST00000553945 PAAF1Q9BRP4 392 aa25.39■■□□□ 1.66
NEK9-203ENST00000553945 VN1R3Q9BXE9 311 aa25.39■■□□□ 1.66
NEK9-203ENST00000553945 CHMP5Q9NZZ3 219 aa25.39■■□□□ 1.66
NEK9-203ENST00000553945 SPTBN5Q9NRC6 3674 aaKnown RBP25.39■■□□□ 1.65
NEK9-203ENST00000553945 HIDE1A8MVS5 230 aa25.38■■□□□ 1.65
NEK9-203ENST00000553945 CXCL14O95715 111 aa25.38■■□□□ 1.65
NEK9-203ENST00000553945 CXCL8P10145 99 aa25.38■■□□□ 1.65
NEK9-203ENST00000553945 TNFSF9P41273 254 aa25.38■■□□□ 1.65
NEK9-203ENST00000553945 HSP90AA2PQ14568 343 aaPredicted RBP25.38■■□□□ 1.65
NEK9-203ENST00000553945 KYAT1Q16773 422 aa25.38■■□□□ 1.65
NEK9-203ENST00000553945 SLC10A6Q3KNW5 377 aa25.38■■□□□ 1.65
NEK9-203ENST00000553945 XKR4Q5GH76 650 aa25.38■■□□□ 1.65
NEK9-203ENST00000553945 FAM26FQ5R3K3 315 aa25.38■■□□□ 1.65
NEK9-203ENST00000553945 ZBTB41Q5SVQ8 909 aa25.38■■□□□ 1.65
NEK9-203ENST00000553945 SLFN12LQ6IEE8 588 aa25.38■■□□□ 1.65
NEK9-203ENST00000553945 GLIS3Q8NEA6 775 aa25.38■■□□□ 1.65
NEK9-203ENST00000553945 ZBP1Q9H171 429 aa25.38■■□□□ 1.65
NEK9-203ENST00000553945 UBE2ZQ9H832 354 aaPredicted RBP25.38■■□□□ 1.65
NEK9-203ENST00000553945 CLDND1Q9NY35 253 aa25.38■■□□□ 1.65
NEK9-203ENST00000553945 MYO7AQ13402 2215 aa25.38■■□□□ 1.65
NEK9-203ENST00000553945 PVALEFA0A1B0GWK0 134 aa25.37■■□□□ 1.65
NEK9-203ENST00000553945 PER2O15055 1255 aa25.37■■□□□ 1.65
NEK9-203ENST00000553945 MEFVO15553 781 aaPredicted RBP25.37■■□□□ 1.65
NEK9-203ENST00000553945 NCK2O43639 380 aa25.37■■□□□ 1.65
NEK9-203ENST00000553945 TFF2Q03403 129 aa25.37■■□□□ 1.65
NEK9-203ENST00000553945 AUTS2Q8WXX7 1259 aa25.37■■□□□ 1.65
NEK9-203ENST00000553945 POMGNT1Q8WZA1 660 aa25.37■■□□□ 1.65
NEK9-203ENST00000553945 PABPC5Q96DU9 382 aaKnown RBP25.37■■□□□ 1.65
NEK9-203ENST00000553945 ZMAT2Q96NC0 199 aaKnown RBP25.37■■□□□ 1.65
NEK9-203ENST00000553945 CNTN3Q9P232 1028 aa25.37■■□□□ 1.65
NEK9-203ENST00000553945 STK39Q9UEW8 545 aa25.37■■□□□ 1.65
NEK9-203ENST00000553945 FAM189A1O60320 539 aa25.36■■□□□ 1.65
NEK9-203ENST00000553945 TADA2AO75478 443 aa25.36■■□□□ 1.65
NEK9-203ENST00000553945 CTSAP10619 480 aa25.36■■□□□ 1.65
NEK9-203ENST00000553945 KCNE1P15382 129 aa25.36■■□□□ 1.65
NEK9-203ENST00000553945 MRPL43Q8N983 215 aaKnown RBP25.36■■□□□ 1.65
NEK9-203ENST00000553945 ATXN2LQ8WWM7 1075 aaKnown RBP25.36■■□□□ 1.65
NEK9-203ENST00000553945 TMEM206Q9H813 350 aa25.36■■□□□ 1.65
NEK9-203ENST00000553945 AGO2Q9UKV8 859 aaKnown RBP25.36■■□□□ 1.65
NEK9-203ENST00000553945 STYXL1Q9Y6J8 313 aa25.36■■□□□ 1.65
NEK9-203ENST00000553945 A0A0C4DFX4 3053 aa25.36■■□□□ 1.65
NEK9-203ENST00000553945 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP25.35■■□□□ 1.65
NEK9-203ENST00000553945 LINC01565O15544 149 aa25.35■■□□□ 1.65
NEK9-203ENST00000553945 ZNF202O95125 648 aa25.35■■□□□ 1.65
NEK9-203ENST00000553945 KCNA5P22460 613 aa25.35■■□□□ 1.65
NEK9-203ENST00000553945 POSTNQ15063 836 aa25.35■■□□□ 1.65
NEK9-203ENST00000553945 ENOX2Q16206 610 aaKnown RBP25.35■■□□□ 1.65
NEK9-203ENST00000553945 KRBA2Q6ZNG9 492 aa25.35■■□□□ 1.65
NEK9-203ENST00000553945 HASPINQ8TF76 798 aa25.35■■□□□ 1.65
NEK9-203ENST00000553945 RPF1Q9H9Y2 349 aaKnown RBP25.35■■□□□ 1.65
NEK9-203ENST00000553945 PLEKHA5Q9HAU0 1116 aa25.35■■□□□ 1.65
NEK9-203ENST00000553945 GOLGA2P5Q9HBQ8 144 aa25.35■■□□□ 1.65
NEK9-203ENST00000553945 SLC38A7Q9NVC3 462 aa25.35■■□□□ 1.65
NEK9-203ENST00000553945 ADAM28Q9UKQ2 775 aa25.35■■□□□ 1.65
NEK9-203ENST00000553945 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP25.34■■□□□ 1.65
NEK9-203ENST00000553945 C2orf71A6NGG8 1288 aa25.34■■□□□ 1.65
NEK9-203ENST00000553945 KIF4AO95239 1232 aa25.34■■□□□ 1.65
NEK9-203ENST00000553945 ADSSP30520 456 aa25.34■■□□□ 1.65
NEK9-203ENST00000553945 ACOT2P49753 483 aa25.34■■□□□ 1.65
NEK9-203ENST00000553945 MRPS5P82675 430 aaKnown RBP25.34■■□□□ 1.65
NEK9-203ENST00000553945 PPP2R3AQ06190 1150 aa25.34■■□□□ 1.65
NEK9-203ENST00000553945 SPAG1Q07617 926 aa25.34■■□□□ 1.65
NEK9-203ENST00000553945 EHHADHQ08426 723 aa25.34■■□□□ 1.65
NEK9-203ENST00000553945 COL19A1Q14993 1142 aa25.34■■□□□ 1.65
NEK9-203ENST00000553945 DUSP6Q16828 381 aa25.34■■□□□ 1.65
NEK9-203ENST00000553945 EPM2AIP1Q7L775 607 aaPredicted RBP25.34■■□□□ 1.65
NEK9-203ENST00000553945 TAS1R1Q7RTX1 841 aa25.34■■□□□ 1.65
NEK9-203ENST00000553945 TMEM87AQ8NBN3 555 aa25.34■■□□□ 1.65
NEK9-203ENST00000553945 C18orf25Q96B23 403 aaPredicted RBP25.34■■□□□ 1.65
NEK9-203ENST00000553945 FAM212AQ96EL1 285 aa25.34■■□□□ 1.65
NEK9-203ENST00000553945 UROC1Q96N76 676 aa25.34■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms