RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 ACAP3Q96P50 834 aa12.79□□□□□ -0.36
TRAFD1-209ENST00000552896 TMEM206Q9H813 350 aa12.79□□□□□ -0.36
TRAFD1-209ENST00000552896 ALG13Q9NP73 1137 aaKnown RBP12.79□□□□□ -0.36
TRAFD1-209ENST00000552896 TLR9Q9NR96 1032 aa12.79□□□□□ -0.36
TRAFD1-209ENST00000552896 CNTN3Q9P232 1028 aa12.79□□□□□ -0.36
TRAFD1-209ENST00000552896 STK39Q9UEW8 545 aa12.79□□□□□ -0.36
TRAFD1-209ENST00000552896 MTCL1Q9Y4B5 1905 aaKnown RBP12.79□□□□□ -0.36
TRAFD1-209ENST00000552896 UNC80Q8N2C7 3258 aa12.79□□□□□ -0.36
TRAFD1-209ENST00000552896 SCN1AP35498 2009 aa12.78□□□□□ -0.36
TRAFD1-209ENST00000552896 TISP43B9A030 160 aa12.78□□□□□ -0.36
TRAFD1-209ENST00000552896 ANKRD63C9JTQ0 380 aa12.78□□□□□ -0.36
TRAFD1-209ENST00000552896 RPN1P04843 607 aaKnown RBP12.78□□□□□ -0.36
TRAFD1-209ENST00000552896 THP07101 528 aa12.78□□□□□ -0.36
TRAFD1-209ENST00000552896 CXCL8P10145 99 aa12.78□□□□□ -0.36
TRAFD1-209ENST00000552896 DNAJB1P25685 340 aa12.78□□□□□ -0.36
TRAFD1-209ENST00000552896 OSTNP61366 133 aa12.78□□□□□ -0.36
TRAFD1-209ENST00000552896 KRT17Q04695 432 aa12.78□□□□□ -0.36
TRAFD1-209ENST00000552896 DPYDQ12882 1025 aa12.78□□□□□ -0.36
TRAFD1-209ENST00000552896 POSTNQ15063 836 aa12.78□□□□□ -0.36
TRAFD1-209ENST00000552896 NAB2Q15742 525 aa12.78□□□□□ -0.36
TRAFD1-209ENST00000552896 BMT2Q1RMZ1 405 aa12.78□□□□□ -0.36
TRAFD1-209ENST00000552896 CLEC17AQ6ZS10 378 aa12.78□□□□□ -0.36
TRAFD1-209ENST00000552896 TMEM173Q86WV6 379 aaPredicted RBP12.78□□□□□ -0.36
TRAFD1-209ENST00000552896 SYCP3Q8IZU3 236 aa12.78□□□□□ -0.36
TRAFD1-209ENST00000552896 GLIS3Q8NEA6 775 aa12.78□□□□□ -0.36
TRAFD1-209ENST00000552896 POF1BQ8WVV4 589 aa12.78□□□□□ -0.36
TRAFD1-209ENST00000552896 TMEM169Q96HH4 297 aa12.78□□□□□ -0.36
TRAFD1-209ENST00000552896 IGSF21Q96ID5 467 aa12.78□□□□□ -0.36
TRAFD1-209ENST00000552896 TIGD1Q96MW7 591 aa12.78□□□□□ -0.36
TRAFD1-209ENST00000552896 PPP1R10Q96QC0 940 aaKnown RBP12.78□□□□□ -0.36
TRAFD1-209ENST00000552896 NSUN3Q9H649 340 aaKnown RBP12.78□□□□□ -0.36
TRAFD1-209ENST00000552896 PLEKHA5Q9HAU0 1116 aa12.78□□□□□ -0.36
TRAFD1-209ENST00000552896 SLC38A7Q9NVC3 462 aa12.78□□□□□ -0.36
TRAFD1-209ENST00000552896 MIOSQ9NXC5 875 aa12.78□□□□□ -0.36
TRAFD1-209ENST00000552896 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.78□□□□□ -0.36
TRAFD1-209ENST00000552896 FSCN2O14926 492 aa12.77□□□□□ -0.37
TRAFD1-209ENST00000552896 MEFVO15553 781 aaPredicted RBP12.77□□□□□ -0.37
TRAFD1-209ENST00000552896 NR1I2O75469 434 aa12.77□□□□□ -0.37
TRAFD1-209ENST00000552896 PRPF6O94906 941 aaKnown RBP12.77□□□□□ -0.37
TRAFD1-209ENST00000552896 RHOBTB3O94955 611 aa12.77□□□□□ -0.37
TRAFD1-209ENST00000552896 KCNE1P15382 129 aa12.77□□□□□ -0.37
TRAFD1-209ENST00000552896 GARTP22102 1010 aa12.77□□□□□ -0.37
TRAFD1-209ENST00000552896 ADSSP30520 456 aa12.77□□□□□ -0.37
TRAFD1-209ENST00000552896 UBE2HP62256 183 aa12.77□□□□□ -0.37
TRAFD1-209ENST00000552896 POU5F1Q01860 360 aaKnown RBP12.77□□□□□ -0.37
TRAFD1-209ENST00000552896 PPP2R3AQ06190 1150 aa12.77□□□□□ -0.37
TRAFD1-209ENST00000552896 PSMD2Q13200 908 aa12.77□□□□□ -0.37
TRAFD1-209ENST00000552896 CAMK1Q14012 370 aa12.77□□□□□ -0.37
TRAFD1-209ENST00000552896 KMT5BQ4FZB7 885 aa12.77□□□□□ -0.37
TRAFD1-209ENST00000552896 GLRA4Q5JXX5 417 aa12.77□□□□□ -0.37
TRAFD1-209ENST00000552896 PDE12Q6L8Q7 609 aaKnown RBP12.77□□□□□ -0.37
TRAFD1-209ENST00000552896 DDX53Q86TM3 631 aaKnown RBP12.77□□□□□ -0.37
TRAFD1-209ENST00000552896 MICALL1Q8N3F8 863 aa12.77□□□□□ -0.37
TRAFD1-209ENST00000552896 ZNF507Q8TCN5 953 aa12.77□□□□□ -0.37
TRAFD1-209ENST00000552896 BCL7CQ8WUZ0 217 aaPredicted RBP12.77□□□□□ -0.37
TRAFD1-209ENST00000552896 SCFD1Q8WVM8 642 aa12.77□□□□□ -0.37
TRAFD1-209ENST00000552896 POMGNT1Q8WZA1 660 aa12.77□□□□□ -0.37
TRAFD1-209ENST00000552896 CCDC47Q96A33 483 aaKnown RBP12.77□□□□□ -0.37
TRAFD1-209ENST00000552896 UROC1Q96N76 676 aa12.77□□□□□ -0.37
TRAFD1-209ENST00000552896 TSPAN18Q96SJ8 248 aa12.77□□□□□ -0.37
TRAFD1-209ENST00000552896 CXCL16Q9H2A7 254 aa12.77□□□□□ -0.37
TRAFD1-209ENST00000552896 MARCH5Q9NX47 278 aa12.77□□□□□ -0.37
TRAFD1-209ENST00000552896 PUF60Q9UHX1 559 aaKnown RBP12.77□□□□□ -0.37
TRAFD1-209ENST00000552896 CPSF3Q9UKF6 684 aaKnown RBP12.77□□□□□ -0.37
TRAFD1-209ENST00000552896 AGO2Q9UKV8 859 aaKnown RBP12.77□□□□□ -0.37
TRAFD1-209ENST00000552896 XIRP2A4UGR9 3374 aa12.76□□□□□ -0.37
TRAFD1-209ENST00000552896 SMIM28A0A1B0GU29 152 aa12.76□□□□□ -0.37
TRAFD1-209ENST00000552896 TTC26A0AVF1 554 aa12.76□□□□□ -0.37
TRAFD1-209ENST00000552896 NT5C1B-RDH14C9J2C7 533 aa12.76□□□□□ -0.37
TRAFD1-209ENST00000552896 NRP1O14786 923 aa12.76□□□□□ -0.37
TRAFD1-209ENST00000552896 KIAA0391O15091 583 aaKnown RBP12.76□□□□□ -0.37
TRAFD1-209ENST00000552896 KINO60870 393 aaKnown RBP12.76□□□□□ -0.37
TRAFD1-209ENST00000552896 ADRB2P07550 413 aa12.76□□□□□ -0.37
TRAFD1-209ENST00000552896 HOXD13P35453 343 aa12.76□□□□□ -0.37
TRAFD1-209ENST00000552896 TNFSF9P41273 254 aa12.76□□□□□ -0.37
TRAFD1-209ENST00000552896 OR1G1P47890 313 aa12.76□□□□□ -0.37
TRAFD1-209ENST00000552896 HSP90AA2PQ14568 343 aaPredicted RBP12.76□□□□□ -0.37
TRAFD1-209ENST00000552896 KCNB1Q14721 858 aa12.76□□□□□ -0.37
TRAFD1-209ENST00000552896 ENOX2Q16206 610 aaKnown RBP12.76□□□□□ -0.37
TRAFD1-209ENST00000552896 SLC10A6Q3KNW5 377 aa12.76□□□□□ -0.37
TRAFD1-209ENST00000552896 SEZ6Q53EL9 994 aa12.76□□□□□ -0.37
TRAFD1-209ENST00000552896 ZBTB41Q5SVQ8 909 aa12.76□□□□□ -0.37
TRAFD1-209ENST00000552896 ELOA2Q8IYF1 753 aaPredicted RBP12.76□□□□□ -0.37
TRAFD1-209ENST00000552896 KIAA0895Q8NCT3 520 aa12.76□□□□□ -0.37
TRAFD1-209ENST00000552896 PPP2R3CQ969Q6 453 aa12.76□□□□□ -0.37
TRAFD1-209ENST00000552896 IKZF4Q9H2S9 585 aa12.76□□□□□ -0.37
TRAFD1-209ENST00000552896 RPF1Q9H9Y2 349 aaKnown RBP12.76□□□□□ -0.37
TRAFD1-209ENST00000552896 SLC39A2Q9NP94 309 aa12.76□□□□□ -0.37
TRAFD1-209ENST00000552896 HOOK1Q9UJC3 728 aaKnown RBP12.76□□□□□ -0.37
TRAFD1-209ENST00000552896 FAN1Q9Y2M0 1017 aa12.76□□□□□ -0.37
TRAFD1-209ENST00000552896 PRG3Q9Y2Y8 225 aaPredicted RBP12.76□□□□□ -0.37
TRAFD1-209ENST00000552896 FARP1Q9Y4F1 1045 aaPredicted RBP12.76□□□□□ -0.37
TRAFD1-209ENST00000552896 FSD2A1L4K1 749 aa12.75□□□□□ -0.37
TRAFD1-209ENST00000552896 CASTOR2A6NHX0 329 aa12.75□□□□□ -0.37
TRAFD1-209ENST00000552896 TMEM189-UBE2V1I3L0A0 370 aa12.75□□□□□ -0.37
TRAFD1-209ENST00000552896 GADD45BO75293 160 aaPredicted RBP12.75□□□□□ -0.37
TRAFD1-209ENST00000552896 ALDH2P05091 517 aa12.75□□□□□ -0.37
TRAFD1-209ENST00000552896 SNRPFP62306 86 aaKnown RBP12.75□□□□□ -0.37
TRAFD1-209ENST00000552896 ARMCX5Q6P1M9 558 aa12.75□□□□□ -0.37
TRAFD1-209ENST00000552896 CD302Q8IX05 232 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms