RNA–Protein interactions for RNA: ENST00000552491.5

LIMA1-212, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIMA1, Length 2,652 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-212ENST00000552491 CCDC17Q96LX7 622 aa5.81□□□□□ -1.48
LIMA1-212ENST00000552491 RPS6KC1Q96S38 1066 aa5.81□□□□□ -1.48
LIMA1-212ENST00000552491 STMN4Q9H169 189 aaPredicted RBP5.81□□□□□ -1.48
LIMA1-212ENST00000552491 CHST7Q9NS84 486 aa5.81□□□□□ -1.48
LIMA1-212ENST00000552491 FAM198AQ9UFP1 575 aa5.81□□□□□ -1.48
LIMA1-212ENST00000552491 MTRF1LQ9UGC7 380 aaKnown RBP5.81□□□□□ -1.48
LIMA1-212ENST00000552491 USP15Q9Y4E8 981 aaPredicted RBP5.81□□□□□ -1.48
LIMA1-212ENST00000552491 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.81□□□□□ -1.48
LIMA1-212ENST00000552491 CFAP73A6NFT4 308 aa5.81□□□□□ -1.48
LIMA1-212ENST00000552491 CYP26A1O43174 497 aa5.81□□□□□ -1.48
LIMA1-212ENST00000552491 HIP1RO75146 1068 aa5.81□□□□□ -1.48
LIMA1-212ENST00000552491 MTA2O94776 668 aa5.81□□□□□ -1.48
LIMA1-212ENST00000552491 FOSP01100 380 aaPredicted RBP5.81□□□□□ -1.48
LIMA1-212ENST00000552491 ARP10275 920 aa5.81□□□□□ -1.48
LIMA1-212ENST00000552491 PDE6CP51160 858 aa5.81□□□□□ -1.48
LIMA1-212ENST00000552491 FMO1Q01740 532 aa5.81□□□□□ -1.48
LIMA1-212ENST00000552491 ICA1Q05084 483 aa5.81□□□□□ -1.48
LIMA1-212ENST00000552491 SLMAPQ14BN4 828 aa5.81□□□□□ -1.48
LIMA1-212ENST00000552491 KYNUQ16719 465 aa5.81□□□□□ -1.48
LIMA1-212ENST00000552491 TBC1D10BQ4KMP7 808 aaPredicted RBP5.81□□□□□ -1.48
LIMA1-212ENST00000552491 TMEM63BQ5T3F8 832 aa5.81□□□□□ -1.48
LIMA1-212ENST00000552491 DAB2IPQ5VWQ8 1189 aa5.81□□□□□ -1.48
LIMA1-212ENST00000552491 NUGGCQ68CJ6 796 aa5.81□□□□□ -1.48
LIMA1-212ENST00000552491 LLGL2Q6P1M3 1020 aa5.81□□□□□ -1.48
LIMA1-212ENST00000552491 RNF207Q6ZRF8 634 aa5.81□□□□□ -1.48
LIMA1-212ENST00000552491 ERICH1Q86X53 443 aa5.81□□□□□ -1.48
LIMA1-212ENST00000552491 ZNF564Q8TBZ8 553 aaPredicted RBP5.81□□□□□ -1.48
LIMA1-212ENST00000552491 SEMA4DQ92854 862 aa5.81□□□□□ -1.48
LIMA1-212ENST00000552491 FAM84AQ96KN4 292 aa5.81□□□□□ -1.48
LIMA1-212ENST00000552491 ZNF570Q96NI8 536 aa5.81□□□□□ -1.48
LIMA1-212ENST00000552491 SH2D3AQ9BRG2 576 aa5.81□□□□□ -1.48
LIMA1-212ENST00000552491 NUP85Q9BW27 656 aa5.81□□□□□ -1.48
LIMA1-212ENST00000552491 NSRP1Q9H0G5 558 aaKnown RBP5.81□□□□□ -1.48
LIMA1-212ENST00000552491 UNC45AQ9H3U1 944 aa5.81□□□□□ -1.48
LIMA1-212ENST00000552491 TUFT1Q9NNX1 390 aa5.81□□□□□ -1.48
LIMA1-212ENST00000552491 PRKAG3Q9UGI9 489 aa5.81□□□□□ -1.48
LIMA1-212ENST00000552491 C15orf41Q9Y2V0 281 aa5.81□□□□□ -1.48
LIMA1-212ENST00000552491 LRRC37AA6NMS7 1700 aa5.8□□□□□ -1.48
LIMA1-212ENST00000552491 CCDC189A1A4V9 331 aa5.8□□□□□ -1.48
LIMA1-212ENST00000552491 O00370 1275 aa5.8□□□□□ -1.48
LIMA1-212ENST00000552491 SPOPO43791 374 aa5.8□□□□□ -1.48
LIMA1-212ENST00000552491 GGPS1O95749 300 aa5.8□□□□□ -1.48
LIMA1-212ENST00000552491 ITGBL1O95965 494 aaPredicted RBP5.8□□□□□ -1.48
LIMA1-212ENST00000552491 CFBP00751 764 aa5.8□□□□□ -1.48
LIMA1-212ENST00000552491 HOXA10P31260 410 aaPredicted RBP5.8□□□□□ -1.48
LIMA1-212ENST00000552491 GBP2P32456 591 aaPredicted RBP5.8□□□□□ -1.48
LIMA1-212ENST00000552491 VAMP7P51809 220 aa5.8□□□□□ -1.48
LIMA1-212ENST00000552491 KRT17Q04695 432 aa5.8□□□□□ -1.48
LIMA1-212ENST00000552491 PPP2R5CQ13362 524 aa5.8□□□□□ -1.48
LIMA1-212ENST00000552491 TATDN1Q6P1N9 297 aa5.8□□□□□ -1.48
LIMA1-212ENST00000552491 PAXIP1Q6ZW49 1069 aaPredicted RBP5.8□□□□□ -1.48
LIMA1-212ENST00000552491 ASRGL1Q7L266 308 aa5.8□□□□□ -1.48
LIMA1-212ENST00000552491 CYFIP1Q7L576 1253 aa5.8□□□□□ -1.48
LIMA1-212ENST00000552491 TAOK1Q7L7X3 1001 aa5.8□□□□□ -1.48
LIMA1-212ENST00000552491 SLC9A9Q8IVB4 645 aa5.8□□□□□ -1.48
LIMA1-212ENST00000552491 SYCP3Q8IZU3 236 aa5.8□□□□□ -1.48
LIMA1-212ENST00000552491 C12orf50Q8NA57 414 aaPredicted RBP5.8□□□□□ -1.48
LIMA1-212ENST00000552491 DYDC1Q8WWB3 177 aa5.8□□□□□ -1.48
LIMA1-212ENST00000552491 CKAP2Q8WWK9 683 aa5.8□□□□□ -1.48
LIMA1-212ENST00000552491 SLC5A5Q92911 643 aa5.8□□□□□ -1.48
LIMA1-212ENST00000552491 UTP4Q969X6 686 aaKnown RBP5.8□□□□□ -1.48
LIMA1-212ENST00000552491 FAM118BQ9BPY3 351 aa5.8□□□□□ -1.48
LIMA1-212ENST00000552491 ROPN1BQ9BZX4 212 aaPredicted RBP5.8□□□□□ -1.48
LIMA1-212ENST00000552491 COA1Q9GZY4 146 aa5.8□□□□□ -1.48
LIMA1-212ENST00000552491 TMEM117Q9H0C3 514 aa5.8□□□□□ -1.48
LIMA1-212ENST00000552491 WNT8AQ9H1J5 351 aa5.8□□□□□ -1.48
LIMA1-212ENST00000552491 LRRC19Q9H756 370 aa5.8□□□□□ -1.48
LIMA1-212ENST00000552491 ROPN1Q9HAT0 212 aaPredicted RBP5.8□□□□□ -1.48
LIMA1-212ENST00000552491 TBK1Q9UHD2 729 aa5.8□□□□□ -1.48
LIMA1-212ENST00000552491 PRR12Q9ULL5 1215 aa5.8□□□□□ -1.48
LIMA1-212ENST00000552491 R3HDM2Q9Y2K5 976 aaKnown RBP5.8□□□□□ -1.48
LIMA1-212ENST00000552491 UBE4BO95155 1302 aa5.8□□□□□ -1.48
LIMA1-212ENST00000552491 PASKQ96RG2 1323 aa5.8□□□□□ -1.48
LIMA1-212ENST00000552491 TMEM150BA6NC51 233 aa5.8□□□□□ -1.48
LIMA1-212ENST00000552491 GOLGA8IPA6NC78 632 aa5.8□□□□□ -1.48
LIMA1-212ENST00000552491 GOLGA8JA6NMD2 632 aa5.8□□□□□ -1.48
LIMA1-212ENST00000552491 K7ENM7 598 aa5.8□□□□□ -1.48
LIMA1-212ENST00000552491 TULP1O00294 542 aaPredicted RBP5.8□□□□□ -1.48
LIMA1-212ENST00000552491 FSCN2O14926 492 aa5.8□□□□□ -1.48
LIMA1-212ENST00000552491 GRIN3BO60391 1043 aa5.8□□□□□ -1.48
LIMA1-212ENST00000552491 DIAPH2O60879 1101 aa5.8□□□□□ -1.48
LIMA1-212ENST00000552491 GJB6O95452 261 aa5.8□□□□□ -1.48
LIMA1-212ENST00000552491 ECEL1O95672 775 aa5.8□□□□□ -1.48
LIMA1-212ENST00000552491 CYP1A2P05177 515 aa5.8□□□□□ -1.48
LIMA1-212ENST00000552491 ADRB2P07550 413 aa5.8□□□□□ -1.48
LIMA1-212ENST00000552491 BCRP11274 1271 aa5.8□□□□□ -1.48
LIMA1-212ENST00000552491 BRAFP15056 766 aa5.8□□□□□ -1.48
LIMA1-212ENST00000552491 RFX1P22670 979 aa5.8□□□□□ -1.48
LIMA1-212ENST00000552491 FOXN2P32314 431 aa5.8□□□□□ -1.48
LIMA1-212ENST00000552491 CRKP46108 304 aa5.8□□□□□ -1.48
LIMA1-212ENST00000552491 VPS41P49754 854 aa5.8□□□□□ -1.48
LIMA1-212ENST00000552491 PRELPP51888 382 aa5.8□□□□□ -1.48
LIMA1-212ENST00000552491 COPS2P61201 443 aa5.8□□□□□ -1.48
LIMA1-212ENST00000552491 CRYMQ14894 314 aa5.8□□□□□ -1.48
LIMA1-212ENST00000552491 NAA25Q14CX7 972 aa5.8□□□□□ -1.48
LIMA1-212ENST00000552491 HHIPL2Q6UWX4 724 aa5.8□□□□□ -1.48
LIMA1-212ENST00000552491 B3GNT9Q6UX72 402 aa5.8□□□□□ -1.48
LIMA1-212ENST00000552491 SPATA21Q7Z572 469 aa5.8□□□□□ -1.48
LIMA1-212ENST00000552491 PHLDB2Q86SQ0 1253 aa5.8□□□□□ -1.48
LIMA1-212ENST00000552491 KIAA0825Q8IV33 1275 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms