RNA–Protein interactions for RNA: ENST00000550391.5

CACNB3-216, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-216ENST00000550391 NDST4Q9H3R1 872 aa15.33■□□□□ 0.04
CACNB3-216ENST00000550391 HIPK3Q9H422 1215 aa15.33■□□□□ 0.04
CACNB3-216ENST00000550391 INTS13Q9NVM9 706 aa15.33■□□□□ 0.04
CACNB3-216ENST00000550391 UMODL1Q5DID0 1318 aa15.33■□□□□ 0.04
CACNB3-216ENST00000550391 NPTXRO95502 500 aa15.32■□□□□ 0.04
CACNB3-216ENST00000550391 AFPP02771 609 aaKnown RBP15.32■□□□□ 0.04
CACNB3-216ENST00000550391 CDC25BP30305 580 aa15.32■□□□□ 0.04
CACNB3-216ENST00000550391 KCNH2Q12809 1159 aa15.32■□□□□ 0.04
CACNB3-216ENST00000550391 GPNMBQ14956 572 aa15.32■□□□□ 0.04
CACNB3-216ENST00000550391 PSMD6Q15008 389 aa15.32■□□□□ 0.04
CACNB3-216ENST00000550391 DCAF17Q5H9S7 520 aaPredicted RBP15.32■□□□□ 0.04
CACNB3-216ENST00000550391 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.32■□□□□ 0.04
CACNB3-216ENST00000550391 PARD3BQ8TEW8 1205 aa15.32■□□□□ 0.04
CACNB3-216ENST00000550391 TMX1Q9H3N1 280 aa15.32■□□□□ 0.04
CACNB3-216ENST00000550391 RBAKQ9NYW8 714 aaPredicted RBP15.32■□□□□ 0.04
CACNB3-216ENST00000550391 PRKAG2Q9UGJ0 569 aa15.32■□□□□ 0.04
CACNB3-216ENST00000550391 TEX33O43247 280 aa15.31■□□□□ 0.04
CACNB3-216ENST00000550391 STX10O60499 249 aa15.31■□□□□ 0.04
CACNB3-216ENST00000550391 NBNO60934 754 aa15.31■□□□□ 0.04
CACNB3-216ENST00000550391 PARNO95453 639 aaKnown RBP15.31■□□□□ 0.04
CACNB3-216ENST00000550391 CLTAP09496 248 aa15.31■□□□□ 0.04
CACNB3-216ENST00000550391 STAG3L1P0CL83 205 aa15.31■□□□□ 0.04
CACNB3-216ENST00000550391 GRM5P41594 1212 aa15.31■□□□□ 0.04
CACNB3-216ENST00000550391 WNT7BP56706 349 aa15.31■□□□□ 0.04
CACNB3-216ENST00000550391 DLG4P78352 724 aa15.31■□□□□ 0.04
CACNB3-216ENST00000550391 UBXN1Q04323 297 aa15.31■□□□□ 0.04
CACNB3-216ENST00000550391 DSC3Q14574 896 aa15.31■□□□□ 0.04
CACNB3-216ENST00000550391 SURF1Q15526 300 aa15.31■□□□□ 0.04
CACNB3-216ENST00000550391 C1orf220Q5T0J3 134 aa15.31■□□□□ 0.04
CACNB3-216ENST00000550391 TWF2Q6IBS0 349 aaKnown RBP15.31■□□□□ 0.04
CACNB3-216ENST00000550391 FAM43BQ6ZT52 329 aaPredicted RBP15.31■□□□□ 0.04
CACNB3-216ENST00000550391 BRSK2Q8IWQ3 736 aa15.31■□□□□ 0.04
CACNB3-216ENST00000550391 TMEM192Q8IY95 271 aa15.31■□□□□ 0.04
CACNB3-216ENST00000550391 CCDC127Q96BQ5 260 aa15.31■□□□□ 0.04
CACNB3-216ENST00000550391 TRIM6Q9C030 488 aaPredicted RBP15.31■□□□□ 0.04
CACNB3-216ENST00000550391 WNT8AQ9H1J5 351 aa15.31■□□□□ 0.04
CACNB3-216ENST00000550391 RPF1Q9H9Y2 349 aaKnown RBP15.31■□□□□ 0.04
CACNB3-216ENST00000550391 TMEM39AQ9NV64 488 aa15.31■□□□□ 0.04
CACNB3-216ENST00000550391 LRRIQ3A6PVS8 624 aaPredicted RBP15.3■□□□□ 0.04
CACNB3-216ENST00000550391 MGEA5O60502 916 aa15.3■□□□□ 0.04
CACNB3-216ENST00000550391 IL18RAPO95256 599 aa15.3■□□□□ 0.04
CACNB3-216ENST00000550391 TRIM49P0CI25 452 aa15.3■□□□□ 0.04
CACNB3-216ENST00000550391 TRIM49CP0CI26 452 aa15.3■□□□□ 0.04
CACNB3-216ENST00000550391 ANK1P16157 1881 aa15.3■□□□□ 0.04
CACNB3-216ENST00000550391 ZSCAN20P17040 1043 aaPredicted RBP15.3■□□□□ 0.04
CACNB3-216ENST00000550391 GTF2H1P32780 548 aa15.3■□□□□ 0.04
CACNB3-216ENST00000550391 OSTNP61366 133 aa15.3■□□□□ 0.04
CACNB3-216ENST00000550391 CLDN10P78369 228 aa15.3■□□□□ 0.04
CACNB3-216ENST00000550391 ENOX2Q16206 610 aaKnown RBP15.3■□□□□ 0.04
CACNB3-216ENST00000550391 ACAP3Q96P50 834 aa15.3■□□□□ 0.04
CACNB3-216ENST00000550391 FNBP1Q96RU3 617 aa15.3■□□□□ 0.04
CACNB3-216ENST00000550391 CCDC94Q9BW85 323 aaPredicted RBP15.3■□□□□ 0.04
CACNB3-216ENST00000550391 TRAIPQ9BWF2 469 aa15.3■□□□□ 0.04
CACNB3-216ENST00000550391 IFIH1Q9BYX4 1025 aaKnown RBP15.3■□□□□ 0.04
CACNB3-216ENST00000550391 PPP1R12CQ9BZL4 782 aa15.3■□□□□ 0.04
CACNB3-216ENST00000550391 A0A1W2PQC6 194 aa15.29■□□□□ 0.04
CACNB3-216ENST00000550391 TULP1O00294 542 aaPredicted RBP15.29■□□□□ 0.04
CACNB3-216ENST00000550391 KIAA0355O15063 1070 aa15.29■□□□□ 0.04
CACNB3-216ENST00000550391 MEFVO15553 781 aaPredicted RBP15.29■□□□□ 0.04
CACNB3-216ENST00000550391 N4BP1O75113 896 aaKnown RBP15.29■□□□□ 0.04
CACNB3-216ENST00000550391 CXCL10P02778 98 aa15.29■□□□□ 0.04
CACNB3-216ENST00000550391 CXCL8P10145 99 aa15.29■□□□□ 0.04
CACNB3-216ENST00000550391 CYP2C18P33260 490 aa15.29■□□□□ 0.04
CACNB3-216ENST00000550391 PBX1P40424 430 aa15.29■□□□□ 0.04
CACNB3-216ENST00000550391 FMO5P49326 533 aa15.29■□□□□ 0.04
CACNB3-216ENST00000550391 CCL23P55773 120 aa15.29■□□□□ 0.04
CACNB3-216ENST00000550391 MRPS5P82675 430 aaKnown RBP15.29■□□□□ 0.04
CACNB3-216ENST00000550391 PLEKHG4Q58EX7 1191 aa15.29■□□□□ 0.04
CACNB3-216ENST00000550391 VSTM4Q8IW00 320 aa15.29■□□□□ 0.04
CACNB3-216ENST00000550391 DRC7Q8IY82 874 aa15.29■□□□□ 0.04
CACNB3-216ENST00000550391 SMG8Q8ND04 991 aaKnown RBP15.29■□□□□ 0.04
CACNB3-216ENST00000550391 SCLYQ96I15 445 aa15.29■□□□□ 0.04
CACNB3-216ENST00000550391 CGRRF1Q99675 332 aa15.29■□□□□ 0.04
CACNB3-216ENST00000550391 NXF3Q9H4D5 531 aaKnown RBP15.29■□□□□ 0.04
CACNB3-216ENST00000550391 PDE11AQ9HCR9 933 aa15.29■□□□□ 0.04
CACNB3-216ENST00000550391 FAM105AQ9NUU6 356 aa15.29■□□□□ 0.04
CACNB3-216ENST00000550391 SNTG2Q9NY99 539 aa15.29■□□□□ 0.04
CACNB3-216ENST00000550391 THEGQ9P2T0 379 aa15.29■□□□□ 0.04
CACNB3-216ENST00000550391 IPPQ9Y573 584 aa15.29■□□□□ 0.04
CACNB3-216ENST00000550391 SCN5AQ14524 2016 aa15.29■□□□□ 0.04
CACNB3-216ENST00000550391 RALGAPA2Q2PPJ7 1873 aa15.29■□□□□ 0.04
CACNB3-216ENST00000550391 BDP1A6H8Y1 2624 aa15.28■□□□□ 0.04
CACNB3-216ENST00000550391 TRIM43BA6NCK2 446 aa15.28■□□□□ 0.04
CACNB3-216ENST00000550391 PMM2O15305 246 aa15.28■□□□□ 0.04
CACNB3-216ENST00000550391 P4HA2O15460 535 aa15.28■□□□□ 0.04
CACNB3-216ENST00000550391 DLATP10515 647 aaKnown RBP15.28■□□□□ 0.04
CACNB3-216ENST00000550391 AP3M2P53677 418 aa15.28■□□□□ 0.04
CACNB3-216ENST00000550391 PPP3CAQ08209 521 aa15.28■□□□□ 0.04
CACNB3-216ENST00000550391 CCDC173Q0VFZ6 552 aa15.28■□□□□ 0.04
CACNB3-216ENST00000550391 SHHQ15465 462 aa15.28■□□□□ 0.04
CACNB3-216ENST00000550391 SLC10A6Q3KNW5 377 aa15.28■□□□□ 0.04
CACNB3-216ENST00000550391 ALYREFQ86V81 257 aaKnown RBP15.28■□□□□ 0.04
CACNB3-216ENST00000550391 HACE1Q8IYU2 909 aa15.28■□□□□ 0.04
CACNB3-216ENST00000550391 APBB2Q92870 758 aa15.28■□□□□ 0.04
CACNB3-216ENST00000550391 TRIM43Q96BQ3 446 aaPredicted RBP15.28■□□□□ 0.04
CACNB3-216ENST00000550391 FAM212AQ96EL1 285 aa15.28■□□□□ 0.04
CACNB3-216ENST00000550391 PDLIM2Q96JY6 352 aa15.28■□□□□ 0.04
CACNB3-216ENST00000550391 ERGIC2Q96RQ1 377 aa15.28■□□□□ 0.04
CACNB3-216ENST00000550391 POP1Q99575 1024 aaKnown RBP15.28■□□□□ 0.04
CACNB3-216ENST00000550391 ADAM2Q99965 735 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms