RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 C15orf39Q6ZRI6 1047 aa14.76□□□□□ -0.05
NUP188-211ENST00000550219 IGSF22Q8N9C0 903 aa14.76□□□□□ -0.05
NUP188-211ENST00000550219 KRI1Q8N9T8 703 aaKnown RBP14.76□□□□□ -0.05
NUP188-211ENST00000550219 SMG7Q92540 1137 aaKnown RBP14.76□□□□□ -0.05
NUP188-211ENST00000550219 GBP4Q96PP9 640 aa14.76□□□□□ -0.05
NUP188-211ENST00000550219 PAAF1Q9BRP4 392 aa14.76□□□□□ -0.05
NUP188-211ENST00000550219 PIDD1Q9HB75 910 aa14.76□□□□□ -0.05
NUP188-211ENST00000550219 GDPD2Q9HCC8 539 aa14.76□□□□□ -0.05
NUP188-211ENST00000550219 GDAQ9Y2T3 454 aa14.76□□□□□ -0.05
NUP188-211ENST00000550219 ZMYM2Q9UBW7 1377 aa14.75□□□□□ -0.05
NUP188-211ENST00000550219 SF3B1O75533 1304 aaKnown RBP eCLIP14.75□□□□□ -0.05
NUP188-211ENST00000550219 KIF4AO95239 1232 aa14.75□□□□□ -0.05
NUP188-211ENST00000550219 NAMPTP43490 491 aa14.75□□□□□ -0.05
NUP188-211ENST00000550219 GRIN1Q05586 938 aa14.75□□□□□ -0.05
NUP188-211ENST00000550219 TUSC3Q13454 348 aa14.75□□□□□ -0.05
NUP188-211ENST00000550219 PPP2R5AQ15172 486 aa14.75□□□□□ -0.05
NUP188-211ENST00000550219 ECM1Q16610 540 aa14.75□□□□□ -0.05
NUP188-211ENST00000550219 USP41Q3LFD5 358 aa14.75□□□□□ -0.05
NUP188-211ENST00000550219 EEF1DP3Q658K8 133 aa14.75□□□□□ -0.05
NUP188-211ENST00000550219 CEP57Q86XR8 500 aa14.75□□□□□ -0.05
NUP188-211ENST00000550219 SNX29Q8TEQ0 813 aa14.75□□□□□ -0.05
NUP188-211ENST00000550219 IFT74Q96LB3 600 aa14.75□□□□□ -0.05
NUP188-211ENST00000550219 BHMT2Q9H2M3 363 aa14.75□□□□□ -0.05
NUP188-211ENST00000550219 FZD8Q9H461 694 aa14.75□□□□□ -0.05
NUP188-211ENST00000550219 RXFP1Q9HBX9 757 aa14.75□□□□□ -0.05
NUP188-211ENST00000550219 DPP7Q9UHL4 492 aa14.75□□□□□ -0.05
NUP188-211ENST00000550219 PCDHA7Q9UN72 937 aa14.75□□□□□ -0.05
NUP188-211ENST00000550219 PTGESO14684 152 aa14.74□□□□□ -0.05
NUP188-211ENST00000550219 TGM5O43548 720 aa14.74□□□□□ -0.05
NUP188-211ENST00000550219 CUTAO60888 179 aa14.74□□□□□ -0.05
NUP188-211ENST00000550219 EFEMP2O95967 443 aa14.74□□□□□ -0.05
NUP188-211ENST00000550219 LONP1P36776 959 aaKnown RBP14.74□□□□□ -0.05
NUP188-211ENST00000550219 FAM187BQ17R55 369 aa14.74□□□□□ -0.05
NUP188-211ENST00000550219 GLRA4Q5JXX5 417 aa14.74□□□□□ -0.05
NUP188-211ENST00000550219 RTP2Q5QGT7 225 aa14.74□□□□□ -0.05
NUP188-211ENST00000550219 ADALQ6DHV7 355 aa14.74□□□□□ -0.05
NUP188-211ENST00000550219 GET4Q7L5D6 327 aaPredicted RBP14.74□□□□□ -0.05
NUP188-211ENST00000550219 TMEM105Q8N8V8 129 aa14.74□□□□□ -0.05
NUP188-211ENST00000550219 FLCNQ8NFG4 579 aa14.74□□□□□ -0.05
NUP188-211ENST00000550219 CMASQ8NFW8 434 aaPredicted RBP14.74□□□□□ -0.05
NUP188-211ENST00000550219 ATOH1Q92858 354 aaPredicted RBP14.74□□□□□ -0.05
NUP188-211ENST00000550219 AK8Q96MA6 479 aa14.74□□□□□ -0.05
NUP188-211ENST00000550219 CLIC6Q96NY7 704 aa14.74□□□□□ -0.05
NUP188-211ENST00000550219 CCDC113Q9H0I3 377 aa14.74□□□□□ -0.05
NUP188-211ENST00000550219 CXCL16Q9H2A7 254 aa14.74□□□□□ -0.05
NUP188-211ENST00000550219 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.74□□□□□ -0.05
NUP188-211ENST00000550219 CHST7Q9NS84 486 aa14.74□□□□□ -0.05
NUP188-211ENST00000550219 DDX19AQ9NUU7 478 aaKnown RBP14.74□□□□□ -0.05
NUP188-211ENST00000550219 LRWD1Q9UFC0 647 aa14.74□□□□□ -0.05
NUP188-211ENST00000550219 FBXL21Q9UKT6 434 aa14.74□□□□□ -0.05
NUP188-211ENST00000550219 KIAA1024Q9UPX6 916 aa14.74□□□□□ -0.05
NUP188-211ENST00000550219 TCHHQ07283 1943 aa14.74□□□□□ -0.05
NUP188-211ENST00000550219 VWA3AA6NCI4 1184 aa14.73□□□□□ -0.05
NUP188-211ENST00000550219 PP2D1A8MPX8 630 aa14.73□□□□□ -0.05
NUP188-211ENST00000550219 H0Y858 1186 aa14.73□□□□□ -0.05
NUP188-211ENST00000550219 ACKR2O00590 384 aa14.73□□□□□ -0.05
NUP188-211ENST00000550219 N4BP1O75113 896 aaKnown RBP14.73□□□□□ -0.05
NUP188-211ENST00000550219 THP07101 528 aa14.73□□□□□ -0.05
NUP188-211ENST00000550219 ME1P48163 572 aa14.73□□□□□ -0.05
NUP188-211ENST00000550219 CREMQ03060 361 aa14.73□□□□□ -0.05
NUP188-211ENST00000550219 TDGQ13569 410 aa14.73□□□□□ -0.05
NUP188-211ENST00000550219 FAM171A1Q5VUB5 890 aa14.73□□□□□ -0.05
NUP188-211ENST00000550219 STAMQ92783 540 aa14.73□□□□□ -0.05
NUP188-211ENST00000550219 RAB34Q9BZG1 259 aa14.73□□□□□ -0.05
NUP188-211ENST00000550219 KCNK12Q9HB15 430 aa14.73□□□□□ -0.05
NUP188-211ENST00000550219 DUSP12Q9UNI6 340 aa14.73□□□□□ -0.05
NUP188-211ENST00000550219 A0A1W2PQ27 194 aa14.72□□□□□ -0.05
NUP188-211ENST00000550219 A0A1W2PQ64 194 aa14.72□□□□□ -0.05
NUP188-211ENST00000550219 A0A1W2PQD8 194 aa14.72□□□□□ -0.05
NUP188-211ENST00000550219 NARSO43776 548 aaKnown RBP14.72□□□□□ -0.05
NUP188-211ENST00000550219 ZRSR1Q15695 479 aaKnown RBP14.72□□□□□ -0.05
NUP188-211ENST00000550219 PSMD5Q16401 504 aa14.72□□□□□ -0.05
NUP188-211ENST00000550219 DCAF4L1Q3SXM0 396 aa14.72□□□□□ -0.05
NUP188-211ENST00000550219 ATF7IP2Q5U623 682 aa14.72□□□□□ -0.05
NUP188-211ENST00000550219 RSAD2Q8WXG1 361 aa14.72□□□□□ -0.05
NUP188-211ENST00000550219 KIFAP3Q92845 792 aa14.72□□□□□ -0.05
NUP188-211ENST00000550219 ZNF707Q96C28 371 aaPredicted RBP14.72□□□□□ -0.05
NUP188-211ENST00000550219 MYADMQ96S97 322 aa14.72□□□□□ -0.05
NUP188-211ENST00000550219 PLEKHA4Q9H4M7 779 aa14.72□□□□□ -0.05
NUP188-211ENST00000550219 WDR6Q9NNW5 1121 aaKnown RBP14.72□□□□□ -0.05
NUP188-211ENST00000550219 FNIP2Q9P278 1114 aa14.72□□□□□ -0.05
NUP188-211ENST00000550219 TRIOO75962 3097 aa14.72□□□□□ -0.05
NUP188-211ENST00000550219 PHLPP2Q6ZVD8 1323 aa14.71□□□□□ -0.05
NUP188-211ENST00000550219 FAM237AA0A1B0GTK4 181 aa14.71□□□□□ -0.05
NUP188-211ENST00000550219 CCDC169A6NNP5 214 aa14.71□□□□□ -0.05
NUP188-211ENST00000550219 E9PMD0 336 aa14.71□□□□□ -0.05
NUP188-211ENST00000550219 SLC26A4O43511 780 aa14.71□□□□□ -0.05
NUP188-211ENST00000550219 GALR2O43603 387 aaPredicted RBP14.71□□□□□ -0.05
NUP188-211ENST00000550219 CFHP08603 1231 aa14.71□□□□□ -0.05
NUP188-211ENST00000550219 MUTP22033 750 aa14.71□□□□□ -0.05
NUP188-211ENST00000550219 RFX1P22670 979 aa14.71□□□□□ -0.05
NUP188-211ENST00000550219 CMA1P23946 247 aa14.71□□□□□ -0.05
NUP188-211ENST00000550219 PEX3P56589 373 aa14.71□□□□□ -0.05
NUP188-211ENST00000550219 NT5DC1Q5TFE4 455 aa14.71□□□□□ -0.05
NUP188-211ENST00000550219 LIN9Q5TKA1 542 aa14.71□□□□□ -0.05
NUP188-211ENST00000550219 RESP18Q5W5W9 173 aa14.71□□□□□ -0.05
NUP188-211ENST00000550219 CWF19L1Q69YN2 538 aaKnown RBP14.71□□□□□ -0.05
NUP188-211ENST00000550219 ASTLQ6HA08 431 aaPredicted RBP14.71□□□□□ -0.05
NUP188-211ENST00000550219 SHC4Q6S5L8 630 aa14.71□□□□□ -0.05
NUP188-211ENST00000550219 PIAS4Q8N2W9 510 aaPredicted RBP14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms