RNA–Protein interactions for RNA: ENST00000550208.1

BRF1-216, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-216ENST00000550208 ACOT2P49753 483 aa24.57■■□□□ 1.52
BRF1-216ENST00000550208 KCNB1Q14721 858 aa24.57■■□□□ 1.52
BRF1-216ENST00000550208 BMT2Q1RMZ1 405 aa24.57■■□□□ 1.52
BRF1-216ENST00000550208 ELOA2Q8IYF1 753 aaPredicted RBP24.57■■□□□ 1.52
BRF1-216ENST00000550208 ZSWIM2Q8NEG5 633 aa24.57■■□□□ 1.52
BRF1-216ENST00000550208 SNX27Q96L92 541 aa24.57■■□□□ 1.52
BRF1-216ENST00000550208 ZMAT2Q96NC0 199 aaKnown RBP24.57■■□□□ 1.52
BRF1-216ENST00000550208 GBP4Q96PP9 640 aa24.57■■□□□ 1.52
BRF1-216ENST00000550208 PCIF1Q9H4Z3 704 aa24.57■■□□□ 1.52
BRF1-216ENST00000550208 LMBRD1Q9NUN5 540 aa24.57■■□□□ 1.52
BRF1-216ENST00000550208 CPSF3Q9UKF6 684 aaKnown RBP24.57■■□□□ 1.52
BRF1-216ENST00000550208 PCDHA5Q9Y5H7 936 aa24.57■■□□□ 1.52
BRF1-216ENST00000550208 NRP1O14786 923 aa24.56■■□□□ 1.52
BRF1-216ENST00000550208 CXCL8P10145 99 aa24.56■■□□□ 1.52
BRF1-216ENST00000550208 GARTP22102 1010 aa24.56■■□□□ 1.52
BRF1-216ENST00000550208 OR1G1P47890 313 aa24.56■■□□□ 1.52
BRF1-216ENST00000550208 PLCB3Q01970 1234 aa24.56■■□□□ 1.52
BRF1-216ENST00000550208 CAMK1Q14012 370 aa24.56■■□□□ 1.52
BRF1-216ENST00000550208 NAB2Q15742 525 aa24.56■■□□□ 1.52
BRF1-216ENST00000550208 KYAT1Q16773 422 aa24.56■■□□□ 1.52
BRF1-216ENST00000550208 TMEM173Q86WV6 379 aaPredicted RBP24.56■■□□□ 1.52
BRF1-216ENST00000550208 BCL7CQ8WUZ0 217 aaPredicted RBP24.56■■□□□ 1.52
BRF1-216ENST00000550208 POF1BQ8WVV4 589 aa24.56■■□□□ 1.52
BRF1-216ENST00000550208 RABGGTAQ92696 567 aa24.56■■□□□ 1.52
BRF1-216ENST00000550208 PPP1R10Q96QC0 940 aaKnown RBP24.56■■□□□ 1.52
BRF1-216ENST00000550208 CBWD1Q9BRT8 395 aa24.56■■□□□ 1.52
BRF1-216ENST00000550208 RPF1Q9H9Y2 349 aaKnown RBP24.56■■□□□ 1.52
BRF1-216ENST00000550208 CACNG4Q9UBN1 327 aa24.56■■□□□ 1.52
BRF1-216ENST00000550208 HOOK1Q9UJC3 728 aaKnown RBP24.56■■□□□ 1.52
BRF1-216ENST00000550208 TDRD15B5MCY1 1934 aaKnown RBP24.56■■□□□ 1.52
BRF1-216ENST00000550208 UBE4BO95155 1302 aa24.56■■□□□ 1.52
BRF1-216ENST00000550208 LACTBL1A8MY62 500 aa24.55■■□□□ 1.52
BRF1-216ENST00000550208 ENOX2Q16206 610 aaKnown RBP24.55■■□□□ 1.52
BRF1-216ENST00000550208 KNOP1Q1ED39 458 aaKnown RBP24.55■■□□□ 1.52
BRF1-216ENST00000550208 CRELD2Q6UXH1 353 aaPredicted RBP24.55■■□□□ 1.52
BRF1-216ENST00000550208 IGSF21Q96ID5 467 aa24.55■■□□□ 1.52
BRF1-216ENST00000550208 LMCD1Q9NZU5 365 aa24.55■■□□□ 1.52
BRF1-216ENST00000550208 STXBP5LQ9Y2K9 1186 aa24.55■■□□□ 1.52
BRF1-216ENST00000550208 PRG3Q9Y2Y8 225 aaPredicted RBP24.55■■□□□ 1.52
BRF1-216ENST00000550208 TTC26A0AVF1 554 aa24.54■■□□□ 1.52
BRF1-216ENST00000550208 GOLGA8IPA6NC78 632 aa24.54■■□□□ 1.52
BRF1-216ENST00000550208 GOLGA8JA6NMD2 632 aa24.54■■□□□ 1.52
BRF1-216ENST00000550208 CSPG5O95196 566 aa24.54■■□□□ 1.52
BRF1-216ENST00000550208 SMC2O95347 1197 aa24.54■■□□□ 1.52
BRF1-216ENST00000550208 KCNE1P15382 129 aa24.54■■□□□ 1.52
BRF1-216ENST00000550208 PPM1AP35813 382 aa24.54■■□□□ 1.52
BRF1-216ENST00000550208 KRT17Q04695 432 aa24.54■■□□□ 1.52
BRF1-216ENST00000550208 SPAG1Q07617 926 aa24.54■■□□□ 1.52
BRF1-216ENST00000550208 TUSC3Q13454 348 aa24.54■■□□□ 1.52
BRF1-216ENST00000550208 MRPL38Q96DV4 380 aaKnown RBP24.54■■□□□ 1.52
BRF1-216ENST00000550208 SAAL1Q96ER3 474 aa24.54■■□□□ 1.52
BRF1-216ENST00000550208 LMAN2LQ9H0V9 348 aa24.54■■□□□ 1.52
BRF1-216ENST00000550208 PLEKHA5Q9HAU0 1116 aa24.54■■□□□ 1.52
BRF1-216ENST00000550208 CNTN3Q9P232 1028 aa24.54■■□□□ 1.52
BRF1-216ENST00000550208 COL4A4P53420 1690 aaPredicted RBP24.53■■□□□ 1.52
BRF1-216ENST00000550208 CASTOR2A6NHX0 329 aa24.53■■□□□ 1.52
BRF1-216ENST00000550208 F8W810 466 aa24.53■■□□□ 1.52
BRF1-216ENST00000550208 CLIC2O15247 247 aa24.53■■□□□ 1.52
BRF1-216ENST00000550208 ADRB2P07550 413 aa24.53■■□□□ 1.52
BRF1-216ENST00000550208 PTPROQ16827 1216 aa24.53■■□□□ 1.52
BRF1-216ENST00000550208 ARMCX5Q6P1M9 558 aa24.53■■□□□ 1.52
BRF1-216ENST00000550208 SPATA20Q8TB22 786 aa24.53■■□□□ 1.52
BRF1-216ENST00000550208 SMARCE1Q969G3 411 aa24.53■■□□□ 1.52
BRF1-216ENST00000550208 FAM212AQ96EL1 285 aa24.53■■□□□ 1.52
BRF1-216ENST00000550208 GSDMAQ96QA5 445 aa24.53■■□□□ 1.52
BRF1-216ENST00000550208 PAAF1Q9BRP4 392 aa24.53■■□□□ 1.52
BRF1-216ENST00000550208 FAM213AQ9BRX8 229 aa24.53■■□□□ 1.52
BRF1-216ENST00000550208 MARCH5Q9NX47 278 aa24.53■■□□□ 1.52
BRF1-216ENST00000550208 MAPK8IP1Q9UQF2 711 aa24.53■■□□□ 1.52
BRF1-216ENST00000550208 CITO14578 2027 aa24.52■■□□□ 1.52
BRF1-216ENST00000550208 PLXNA4Q9HCM2 1894 aa24.52■■□□□ 1.52
BRF1-216ENST00000550208 CARNS1A5YM72 827 aa24.52■■□□□ 1.52
BRF1-216ENST00000550208 ERVFC1P60507 584 aa24.52■■□□□ 1.52
BRF1-216ENST00000550208 UBE3AQ05086 875 aa24.52■■□□□ 1.52
BRF1-216ENST00000550208 SOX4Q06945 474 aaPredicted RBP24.52■■□□□ 1.52
BRF1-216ENST00000550208 CCDC85BQ15834 202 aaPredicted RBP24.52■■□□□ 1.52
BRF1-216ENST00000550208 MICALL1Q8N3F8 863 aa24.52■■□□□ 1.52
BRF1-216ENST00000550208 PPM1EQ8WY54 764 aa24.52■■□□□ 1.52
BRF1-216ENST00000550208 C18orf25Q96B23 403 aaPredicted RBP24.52■■□□□ 1.52
BRF1-216ENST00000550208 TMEM169Q96HH4 297 aa24.52■■□□□ 1.52
BRF1-216ENST00000550208 COLEC11Q9BWP8 271 aa24.52■■□□□ 1.52
BRF1-216ENST00000550208 AGPAT3Q9NRZ7 376 aa24.52■■□□□ 1.52
BRF1-216ENST00000550208 RMND1Q9NWS8 449 aa24.52■■□□□ 1.52
BRF1-216ENST00000550208 PUF60Q9UHX1 559 aaKnown RBP24.52■■□□□ 1.52
BRF1-216ENST00000550208 LZTS1Q9Y250 596 aa24.52■■□□□ 1.52
BRF1-216ENST00000550208 EXTL3O43909 919 aa24.51■■□□□ 1.51
BRF1-216ENST00000550208 LDHAP00338 332 aaKnown RBP24.51■■□□□ 1.51
BRF1-216ENST00000550208 IRS1P35568 1242 aa24.51■■□□□ 1.51
BRF1-216ENST00000550208 SNRPFP62306 86 aaKnown RBP24.51■■□□□ 1.51
BRF1-216ENST00000550208 CAMK4Q16566 473 aa24.51■■□□□ 1.51
BRF1-216ENST00000550208 NOC3LQ8WTT2 800 aaKnown RBP24.51■■□□□ 1.51
BRF1-216ENST00000550208 KCTD10Q9H3F6 313 aa24.51■■□□□ 1.51
BRF1-216ENST00000550208 GOLGA2P5Q9HBQ8 144 aa24.51■■□□□ 1.51
BRF1-216ENST00000550208 HSPBP1Q9NZL4 362 aa24.51■■□□□ 1.51
BRF1-216ENST00000550208 PRRC2BQ5JSZ5 2229 aaKnown RBP24.51■■□□□ 1.51
BRF1-216ENST00000550208 IGFBP6P24592 240 aaPredicted RBP24.5■■□□□ 1.51
BRF1-216ENST00000550208 PPP2R3AQ06190 1150 aa24.5■■□□□ 1.51
BRF1-216ENST00000550208 ZBTB6Q15916 424 aa24.5■■□□□ 1.51
BRF1-216ENST00000550208 ISM2Q6H9L7 571 aa24.5■■□□□ 1.51
BRF1-216ENST00000550208 HS2ST1Q7LGA3 356 aa24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms