RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 LZTS1Q9Y250 596 aa18.33■□□□□ 0.52
CCDC38-203ENST00000546803 FAN1Q9Y2M0 1017 aa18.33■□□□□ 0.52
CCDC38-203ENST00000546803 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.33■□□□□ 0.52
CCDC38-203ENST00000546803 ITGB1P05556 798 aa18.32■□□□□ 0.52
CCDC38-203ENST00000546803 KCNE1P15382 129 aa18.32■□□□□ 0.52
CCDC38-203ENST00000546803 IGFBP4P22692 258 aa18.32■□□□□ 0.52
CCDC38-203ENST00000546803 SLC11A1P49279 550 aa18.32■□□□□ 0.52
CCDC38-203ENST00000546803 TUSC3Q13454 348 aa18.32■□□□□ 0.52
CCDC38-203ENST00000546803 ADGRE1Q14246 886 aa18.32■□□□□ 0.52
CCDC38-203ENST00000546803 SEZ6Q53EL9 994 aa18.32■□□□□ 0.52
CCDC38-203ENST00000546803 ARMCX5Q6P1M9 558 aa18.32■□□□□ 0.52
CCDC38-203ENST00000546803 CD302Q8IX05 232 aa18.32■□□□□ 0.52
CCDC38-203ENST00000546803 NELFCDQ8IXH7 590 aa18.32■□□□□ 0.52
CCDC38-203ENST00000546803 SPATA20Q8TB22 786 aa18.32■□□□□ 0.52
CCDC38-203ENST00000546803 GOLGA5Q8TBA6 731 aa18.32■□□□□ 0.52
CCDC38-203ENST00000546803 SPPL3Q8TCT6 385 aa18.32■□□□□ 0.52
CCDC38-203ENST00000546803 MRPL38Q96DV4 380 aaKnown RBP18.32■□□□□ 0.52
CCDC38-203ENST00000546803 LMBRD1Q9NUN5 540 aa18.32■□□□□ 0.52
CCDC38-203ENST00000546803 SLC38A7Q9NVC3 462 aa18.32■□□□□ 0.52
CCDC38-203ENST00000546803 DNAJB4Q9UDY4 337 aa18.32■□□□□ 0.52
CCDC38-203ENST00000546803 PUF60Q9UHX1 559 aaKnown RBP18.32■□□□□ 0.52
CCDC38-203ENST00000546803 STXBP5LQ9Y2K9 1186 aa18.32■□□□□ 0.52
CCDC38-203ENST00000546803 PCDHA5Q9Y5H7 936 aa18.32■□□□□ 0.52
CCDC38-203ENST00000546803 SMIM28A0A1B0GU29 152 aa18.31■□□□□ 0.52
CCDC38-203ENST00000546803 TTC26A0AVF1 554 aa18.31■□□□□ 0.52
CCDC38-203ENST00000546803 GRM6O15303 877 aa18.31■□□□□ 0.52
CCDC38-203ENST00000546803 TGFB1I1O43294 461 aa18.31■□□□□ 0.52
CCDC38-203ENST00000546803 B4GALT3O60512 393 aa18.31■□□□□ 0.52
CCDC38-203ENST00000546803 ADRB2P07550 413 aa18.31■□□□□ 0.52
CCDC38-203ENST00000546803 CXCL8P10145 99 aa18.31■□□□□ 0.52
CCDC38-203ENST00000546803 PBX3P40426 434 aa18.31■□□□□ 0.52
CCDC38-203ENST00000546803 PPP2R3AQ06190 1150 aa18.31■□□□□ 0.52
CCDC38-203ENST00000546803 HSP90AA2PQ14568 343 aaPredicted RBP18.31■□□□□ 0.52
CCDC38-203ENST00000546803 ENOX2Q16206 610 aaKnown RBP18.31■□□□□ 0.52
CCDC38-203ENST00000546803 TMEM169Q96HH4 297 aa18.31■□□□□ 0.52
CCDC38-203ENST00000546803 IGSF21Q96ID5 467 aa18.31■□□□□ 0.52
CCDC38-203ENST00000546803 PPP1R10Q96QC0 940 aaKnown RBP18.31■□□□□ 0.52
CCDC38-203ENST00000546803 COLEC11Q9BWP8 271 aa18.31■□□□□ 0.52
CCDC38-203ENST00000546803 STK39Q9UEW8 545 aa18.31■□□□□ 0.52
CCDC38-203ENST00000546803 MTCH2Q9Y6C9 303 aa18.31■□□□□ 0.52
CCDC38-203ENST00000546803 NRP1O14786 923 aa18.3■□□□□ 0.52
CCDC38-203ENST00000546803 EXTL3O43909 919 aa18.3■□□□□ 0.52
CCDC38-203ENST00000546803 TNFSF9P41273 254 aa18.3■□□□□ 0.52
CCDC38-203ENST00000546803 OR1G1P47890 313 aa18.3■□□□□ 0.52
CCDC38-203ENST00000546803 ACOT2P49753 483 aa18.3■□□□□ 0.52
CCDC38-203ENST00000546803 GLRA4Q5JXX5 417 aa18.3■□□□□ 0.52
CCDC38-203ENST00000546803 ZBTB41Q5SVQ8 909 aa18.3■□□□□ 0.52
CCDC38-203ENST00000546803 GUF1Q8N442 669 aaKnown RBP18.3■□□□□ 0.52
CCDC38-203ENST00000546803 UROC1Q96N76 676 aa18.3■□□□□ 0.52
CCDC38-203ENST00000546803 CBWD1Q9BRT8 395 aa18.3■□□□□ 0.52
CCDC38-203ENST00000546803 CXCL16Q9H2A7 254 aa18.3■□□□□ 0.52
CCDC38-203ENST00000546803 KIAA1586Q9HCI6 787 aa18.3■□□□□ 0.52
CCDC38-203ENST00000546803 ALG13Q9NP73 1137 aaKnown RBP18.3■□□□□ 0.52
CCDC38-203ENST00000546803 AGPAT3Q9NRZ7 376 aa18.3■□□□□ 0.52
CCDC38-203ENST00000546803 GBF1Q92538 1859 aa18.29■□□□□ 0.52
CCDC38-203ENST00000546803 NT5C1B-RDH14C9J2C7 533 aa18.29■□□□□ 0.52
CCDC38-203ENST00000546803 MEFVO15553 781 aaPredicted RBP18.29■□□□□ 0.52
CCDC38-203ENST00000546803 NAB2Q15742 525 aa18.29■□□□□ 0.52
CCDC38-203ENST00000546803 PDE12Q6L8Q7 609 aaKnown RBP18.29■□□□□ 0.52
CCDC38-203ENST00000546803 CRELD2Q6UXH1 353 aaPredicted RBP18.29■□□□□ 0.52
CCDC38-203ENST00000546803 C12orf56Q8IXR9 622 aa18.29■□□□□ 0.52
CCDC38-203ENST00000546803 GPD1LQ8N335 351 aa18.29■□□□□ 0.52
CCDC38-203ENST00000546803 POF1BQ8WVV4 589 aa18.29■□□□□ 0.52
CCDC38-203ENST00000546803 DDX27Q96GQ7 796 aaKnown RBP18.29■□□□□ 0.52
CCDC38-203ENST00000546803 ZMAT2Q96NC0 199 aaKnown RBP18.29■□□□□ 0.52
CCDC38-203ENST00000546803 FAM213AQ9BRX8 229 aa18.29■□□□□ 0.52
CCDC38-203ENST00000546803 ASB7Q9H672 318 aa18.29■□□□□ 0.52
CCDC38-203ENST00000546803 LACTBL1A8MY62 500 aa18.28■□□□□ 0.52
CCDC38-203ENST00000546803 PDXKO00764 312 aa18.28■□□□□ 0.52
CCDC38-203ENST00000546803 XPOTO43592 962 aaKnown RBP18.28■□□□□ 0.52
CCDC38-203ENST00000546803 IL18RAPO95256 599 aa18.28■□□□□ 0.52
CCDC38-203ENST00000546803 BMS1Q14692 1282 aaKnown RBP18.28■□□□□ 0.52
CCDC38-203ENST00000546803 TIGD5Q53EQ6 642 aa18.28■□□□□ 0.52
CCDC38-203ENST00000546803 COBLL1Q53SF7 1204 aa18.28■□□□□ 0.52
CCDC38-203ENST00000546803 ZNF658Q5TYW1 1059 aaPredicted RBP18.28■□□□□ 0.52
CCDC38-203ENST00000546803 DDX53Q86TM3 631 aaKnown RBP18.28■□□□□ 0.52
CCDC38-203ENST00000546803 TMEM174Q8WUU8 243 aa18.28■□□□□ 0.52
CCDC38-203ENST00000546803 SAAL1Q96ER3 474 aa18.28■□□□□ 0.52
CCDC38-203ENST00000546803 KCTD10Q9H3F6 313 aa18.28■□□□□ 0.52
CCDC38-203ENST00000546803 PCIF1Q9H4Z3 704 aa18.28■□□□□ 0.52
CCDC38-203ENST00000546803 HSPBP1Q9NZL4 362 aa18.28■□□□□ 0.52
CCDC38-203ENST00000546803 PRG3Q9Y2Y8 225 aaPredicted RBP18.28■□□□□ 0.52
CCDC38-203ENST00000546803 DERAQ9Y315 318 aa18.28■□□□□ 0.52
CCDC38-203ENST00000546803 MYH11P35749 1972 aa18.28■□□□□ 0.52
CCDC38-203ENST00000546803 FNDC1Q4ZHG4 1894 aaPredicted RBP18.27■□□□□ 0.52
CCDC38-203ENST00000546803 CASTOR2A6NHX0 329 aa18.27■□□□□ 0.52
CCDC38-203ENST00000546803 CYP3A5P20815 502 aa18.27■□□□□ 0.52
CCDC38-203ENST00000546803 RPL9P32969 192 aaKnown RBP18.27■□□□□ 0.52
CCDC38-203ENST00000546803 CAMK1Q14012 370 aa18.27■□□□□ 0.52
CCDC38-203ENST00000546803 ZBTB6Q15916 424 aa18.27■□□□□ 0.52
CCDC38-203ENST00000546803 TMEM173Q86WV6 379 aaPredicted RBP18.27■□□□□ 0.52
CCDC38-203ENST00000546803 BRSK2Q8IWQ3 736 aa18.27■□□□□ 0.52
CCDC38-203ENST00000546803 ERCC4Q92889 916 aaPredicted RBP18.27■□□□□ 0.52
CCDC38-203ENST00000546803 FAM212AQ96EL1 285 aa18.27■□□□□ 0.52
CCDC38-203ENST00000546803 KIF12Q96FN5 646 aa18.27■□□□□ 0.52
CCDC38-203ENST00000546803 FBXL18Q96ME1 805 aa18.27■□□□□ 0.52
CCDC38-203ENST00000546803 NGRNQ9NPE2 291 aaKnown RBP18.27■□□□□ 0.52
CCDC38-203ENST00000546803 TLR9Q9NR96 1032 aa18.27■□□□□ 0.52
CCDC38-203ENST00000546803 MARCH5Q9NX47 278 aa18.27■□□□□ 0.52
CCDC38-203ENST00000546803 UBQLN1Q9UMX0 589 aaKnown RBP18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms