RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 FOSBP53539 338 aa13.88□□□□□ -0.19
COPS7A-221ENST00000546229 NCBP1Q09161 790 aaKnown RBP13.88□□□□□ -0.19
COPS7A-221ENST00000546229 PSMD5Q16401 504 aa13.88□□□□□ -0.19
COPS7A-221ENST00000546229 NT5DC1Q5TFE4 455 aa13.88□□□□□ -0.19
COPS7A-221ENST00000546229 ELMSAN1Q6PJG2 1045 aa13.88□□□□□ -0.19
COPS7A-221ENST00000546229 PARM1Q6UWI2 310 aa13.88□□□□□ -0.19
COPS7A-221ENST00000546229 MAEAQ7L5Y9 396 aa13.88□□□□□ -0.19
COPS7A-221ENST00000546229 MAML2Q8IZL2 1156 aaPredicted RBP13.88□□□□□ -0.19
COPS7A-221ENST00000546229 C4orf32Q8N8J7 132 aa13.88□□□□□ -0.19
COPS7A-221ENST00000546229 ST13P5Q8NFI4 369 aaPredicted RBP13.88□□□□□ -0.19
COPS7A-221ENST00000546229 TTPALQ9BTX7 342 aa13.88□□□□□ -0.19
COPS7A-221ENST00000546229 KIFC3Q9BVG8 833 aa13.88□□□□□ -0.19
COPS7A-221ENST00000546229 ARHGEF3Q9NR81 526 aa13.88□□□□□ -0.19
COPS7A-221ENST00000546229 PARP2Q9UGN5 583 aa13.88□□□□□ -0.19
COPS7A-221ENST00000546229 CACNA1IQ9P0X4 2223 aa13.88□□□□□ -0.19
COPS7A-221ENST00000546229 SHISA7A6NL88 538 aa13.87□□□□□ -0.19
COPS7A-221ENST00000546229 ACKR2O00590 384 aa13.87□□□□□ -0.19
COPS7A-221ENST00000546229 ABLIM1O14639 778 aa13.87□□□□□ -0.19
COPS7A-221ENST00000546229 NR1I2O75469 434 aa13.87□□□□□ -0.19
COPS7A-221ENST00000546229 PRKCBP05771 671 aa13.87□□□□□ -0.19
COPS7A-221ENST00000546229 C8AP07357 584 aa13.87□□□□□ -0.19
COPS7A-221ENST00000546229 HNRNPA1P09651 372 aaKnown RBP eCLIP13.87□□□□□ -0.19
COPS7A-221ENST00000546229 MCM7P33993 719 aa13.87□□□□□ -0.19
COPS7A-221ENST00000546229 NAMPTP43490 491 aa13.87□□□□□ -0.19
COPS7A-221ENST00000546229 RBM25P49756 843 aaKnown RBP13.87□□□□□ -0.19
COPS7A-221ENST00000546229 XKR4Q5GH76 650 aa13.87□□□□□ -0.19
COPS7A-221ENST00000546229 FAM171A1Q5VUB5 890 aa13.87□□□□□ -0.19
COPS7A-221ENST00000546229 PADI6Q6TGC4 694 aa13.87□□□□□ -0.19
COPS7A-221ENST00000546229 TAS1R3Q7RTX0 852 aa13.87□□□□□ -0.19
COPS7A-221ENST00000546229 GRASPQ7Z6J2 395 aaPredicted RBP13.87□□□□□ -0.19
COPS7A-221ENST00000546229 NOSTRINQ8IVI9 506 aa13.87□□□□□ -0.19
COPS7A-221ENST00000546229 DAW1Q8N136 415 aa13.87□□□□□ -0.19
COPS7A-221ENST00000546229 ADSSL1Q8N142 457 aa13.87□□□□□ -0.19
COPS7A-221ENST00000546229 C2orf40Q9H1Z8 148 aa13.87□□□□□ -0.19
COPS7A-221ENST00000546229 MTRRQ9UBK8 725 aa13.87□□□□□ -0.19
COPS7A-221ENST00000546229 CDH7Q9ULB5 785 aa13.87□□□□□ -0.19
COPS7A-221ENST00000546229 NRG2O14511 850 aaPredicted RBP13.86□□□□□ -0.19
COPS7A-221ENST00000546229 LRRN2O75325 713 aa13.86□□□□□ -0.19
COPS7A-221ENST00000546229 TADA2AO75478 443 aa13.86□□□□□ -0.19
COPS7A-221ENST00000546229 THP07101 528 aa13.86□□□□□ -0.19
COPS7A-221ENST00000546229 OR52Z1P0C646 297 aa13.86□□□□□ -0.19
COPS7A-221ENST00000546229 ATP2B1P20020 1258 aa13.86□□□□□ -0.19
COPS7A-221ENST00000546229 FSHRP23945 695 aa13.86□□□□□ -0.19
COPS7A-221ENST00000546229 STARD6P59095 220 aa13.86□□□□□ -0.19
COPS7A-221ENST00000546229 SOX4Q06945 474 aaPredicted RBP13.86□□□□□ -0.19
COPS7A-221ENST00000546229 ORC2Q13416 577 aaPredicted RBP13.86□□□□□ -0.19
COPS7A-221ENST00000546229 PRPF4BQ13523 1007 aaKnown RBP13.86□□□□□ -0.19
COPS7A-221ENST00000546229 RAB33AQ14088 237 aa13.86□□□□□ -0.19
COPS7A-221ENST00000546229 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.86□□□□□ -0.19
COPS7A-221ENST00000546229 ZBTB8OSQ8IWT0 167 aa13.86□□□□□ -0.19
COPS7A-221ENST00000546229 CEP120Q8N960 986 aa13.86□□□□□ -0.19
COPS7A-221ENST00000546229 PJA1Q8NG27 643 aa13.86□□□□□ -0.19
COPS7A-221ENST00000546229 ITFG1Q8TB96 612 aa13.86□□□□□ -0.19
COPS7A-221ENST00000546229 FGF13Q92913 245 aa13.86□□□□□ -0.19
COPS7A-221ENST00000546229 DDX27Q96GQ7 796 aaKnown RBP13.86□□□□□ -0.19
COPS7A-221ENST00000546229 NACC1Q96RE7 527 aa13.86□□□□□ -0.19
COPS7A-221ENST00000546229 FOXQ1Q9C009 403 aa13.86□□□□□ -0.19
COPS7A-221ENST00000546229 PTPRHQ9HD43 1115 aa13.86□□□□□ -0.19
COPS7A-221ENST00000546229 HCFC1R1Q9NWW0 138 aa13.86□□□□□ -0.19
COPS7A-221ENST00000546229 ZFP37Q9Y6Q3 630 aaPredicted RBP13.86□□□□□ -0.19
COPS7A-221ENST00000546229 TBC1D4O60343 1298 aa13.85□□□□□ -0.19
COPS7A-221ENST00000546229 SEC24BO95487 1268 aa13.85□□□□□ -0.19
COPS7A-221ENST00000546229 DCNP07585 359 aaKnown RBP13.85□□□□□ -0.19
COPS7A-221ENST00000546229 MUTP22033 750 aa13.85□□□□□ -0.19
COPS7A-221ENST00000546229 FXR2P51116 673 aaKnown RBP eCLIP13.85□□□□□ -0.19
COPS7A-221ENST00000546229 GUCY1B3Q02153 619 aa13.85□□□□□ -0.19
COPS7A-221ENST00000546229 MAPK7Q13164 816 aa13.85□□□□□ -0.19
COPS7A-221ENST00000546229 MAPK6Q16659 721 aa13.85□□□□□ -0.19
COPS7A-221ENST00000546229 UPP1Q16831 310 aa13.85□□□□□ -0.19
COPS7A-221ENST00000546229 GLRA4Q5JXX5 417 aa13.85□□□□□ -0.19
COPS7A-221ENST00000546229 ALKAL1Q6UXT8 129 aa13.85□□□□□ -0.19
COPS7A-221ENST00000546229 NPAS3Q8IXF0 933 aa13.85□□□□□ -0.19
COPS7A-221ENST00000546229 SLC7A14Q8TBB6 771 aa13.85□□□□□ -0.19
COPS7A-221ENST00000546229 CCDC43Q96MW1 224 aaKnown RBP13.85□□□□□ -0.19
COPS7A-221ENST00000546229 GOLGA2P5Q9HBQ8 144 aa13.85□□□□□ -0.19
COPS7A-221ENST00000546229 R4GN57 208 aa13.85□□□□□ -0.19
COPS7A-221ENST00000546229 CCL16O15467 120 aa13.84□□□□□ -0.19
COPS7A-221ENST00000546229 SP9P0CG40 484 aa13.84□□□□□ -0.19
COPS7A-221ENST00000546229 PROZP22891 400 aa13.84□□□□□ -0.19
COPS7A-221ENST00000546229 TKTP29401 623 aaKnown RBP13.84□□□□□ -0.19
COPS7A-221ENST00000546229 CLCNKBP51801 687 aa13.84□□□□□ -0.19
COPS7A-221ENST00000546229 NEK4P51957 841 aa13.84□□□□□ -0.19
COPS7A-221ENST00000546229 GPC5P78333 572 aa13.84□□□□□ -0.19
COPS7A-221ENST00000546229 NBR1Q14596 966 aa13.84□□□□□ -0.19
COPS7A-221ENST00000546229 SLC5A9Q2M3M2 681 aa13.84□□□□□ -0.19
COPS7A-221ENST00000546229 DCAF4L1Q3SXM0 396 aa13.84□□□□□ -0.19
COPS7A-221ENST00000546229 DCLRE1AQ6PJP8 1040 aa13.84□□□□□ -0.19
COPS7A-221ENST00000546229 ZNF687Q8N1G0 1237 aa13.84□□□□□ -0.19
COPS7A-221ENST00000546229 IGSF22Q8N9C0 903 aa13.84□□□□□ -0.19
COPS7A-221ENST00000546229 ZMAT2Q96NC0 199 aaKnown RBP13.84□□□□□ -0.19
COPS7A-221ENST00000546229 CDT1Q9H211 546 aa13.84□□□□□ -0.19
COPS7A-221ENST00000546229 FOXP1Q9H334 677 aaPredicted RBP13.84□□□□□ -0.19
COPS7A-221ENST00000546229 PIDD1Q9HB75 910 aa13.84□□□□□ -0.19
COPS7A-221ENST00000546229 POLD4Q9HCU8 107 aa13.84□□□□□ -0.19
COPS7A-221ENST00000546229 ARHGAP28Q9P2N2 729 aa13.84□□□□□ -0.19
COPS7A-221ENST00000546229 DNMT3BQ9UBC3 853 aaKnown RBP13.84□□□□□ -0.19
COPS7A-221ENST00000546229 BACE2Q9Y5Z0 518 aa13.84□□□□□ -0.19
COPS7A-221ENST00000546229 CITO14578 2027 aa13.84□□□□□ -0.19
COPS7A-221ENST00000546229 TSC2P49815 1807 aa13.83□□□□□ -0.2
COPS7A-221ENST00000546229 NCOR2Q9Y618 2525 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms