RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 HOXD10P28358 340 aa13.55□□□□□ -0.24
CHD4-211ENST00000544484 PRAMEP78395 509 aa13.55□□□□□ -0.24
CHD4-211ENST00000544484 TROAPQ12815 778 aa13.55□□□□□ -0.24
CHD4-211ENST00000544484 RAD9BQ6WBX8 426 aa13.55□□□□□ -0.24
CHD4-211ENST00000544484 ELMOD1Q8N336 334 aa13.55□□□□□ -0.24
CHD4-211ENST00000544484 AGR3Q8TD06 166 aa13.55□□□□□ -0.24
CHD4-211ENST00000544484 SCG3Q8WXD2 468 aaKnown RBP13.55□□□□□ -0.24
CHD4-211ENST00000544484 RAPGEF5Q92565 580 aa13.55□□□□□ -0.24
CHD4-211ENST00000544484 TAAR1Q96RJ0 339 aa13.55□□□□□ -0.24
CHD4-211ENST00000544484 TRIM51Q9BSJ1 452 aa13.55□□□□□ -0.24
CHD4-211ENST00000544484 TMEM117Q9H0C3 514 aa13.55□□□□□ -0.24
CHD4-211ENST00000544484 LCMT1Q9UIC8 334 aa13.55□□□□□ -0.24
CHD4-211ENST00000544484 UBA6A0AVT1 1052 aaPredicted RBP13.55□□□□□ -0.24
CHD4-211ENST00000544484 H3BRJ5 948 aa13.55□□□□□ -0.24
CHD4-211ENST00000544484 GYG2O15488 501 aa13.55□□□□□ -0.24
CHD4-211ENST00000544484 SESN2P58004 480 aaPredicted RBP13.55□□□□□ -0.24
CHD4-211ENST00000544484 RBBP8NLQ8NC74 664 aaPredicted RBP13.55□□□□□ -0.24
CHD4-211ENST00000544484 RAET1EQ8TD07 263 aa13.55□□□□□ -0.24
CHD4-211ENST00000544484 KAZALD1Q96I82 304 aa13.55□□□□□ -0.24
CHD4-211ENST00000544484 CALR3Q96L12 384 aaKnown RBP13.55□□□□□ -0.24
CHD4-211ENST00000544484 PXDNLA1KZ92 1463 aa13.55□□□□□ -0.24
CHD4-211ENST00000544484 CEMIPQ8WUJ3 1361 aa13.55□□□□□ -0.24
CHD4-211ENST00000544484 CCDC78A2IDD5 438 aa13.55□□□□□ -0.24
CHD4-211ENST00000544484 ATMINO43313 823 aaPredicted RBP13.55□□□□□ -0.24
CHD4-211ENST00000544484 APOEP02649 317 aa13.55□□□□□ -0.24
CHD4-211ENST00000544484 GRIK1P39086 918 aa13.55□□□□□ -0.24
CHD4-211ENST00000544484 MXD4Q14582 209 aaPredicted RBP13.55□□□□□ -0.24
CHD4-211ENST00000544484 DCAF4L1Q3SXM0 396 aa13.55□□□□□ -0.24
CHD4-211ENST00000544484 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.55□□□□□ -0.24
CHD4-211ENST00000544484 ZBTB41Q5SVQ8 909 aa13.55□□□□□ -0.24
CHD4-211ENST00000544484 ORC6Q9Y5N6 252 aa13.55□□□□□ -0.24
CHD4-211ENST00000544484 DCTN3O75935 186 aa13.54□□□□□ -0.24
CHD4-211ENST00000544484 PDGFRAP16234 1089 aa13.54□□□□□ -0.24
CHD4-211ENST00000544484 NFIAQ12857 509 aa13.54□□□□□ -0.24
CHD4-211ENST00000544484 CATSPER3Q86XQ3 398 aa13.54□□□□□ -0.24
CHD4-211ENST00000544484 CDKL3Q8IVW4 592 aaPredicted RBP13.54□□□□□ -0.24
CHD4-211ENST00000544484 TTC39CQ8N584 583 aa13.54□□□□□ -0.24
CHD4-211ENST00000544484 MORC4Q8TE76 937 aa13.54□□□□□ -0.24
CHD4-211ENST00000544484 SUN2Q9UH99 717 aa13.54□□□□□ -0.24
CHD4-211ENST00000544484 TFR2Q9UP52 801 aa13.54□□□□□ -0.24
CHD4-211ENST00000544484 GOLGA8RI6L899 631 aa13.54□□□□□ -0.24
CHD4-211ENST00000544484 DPYSL4O14531 572 aa13.54□□□□□ -0.24
CHD4-211ENST00000544484 SLC37A4O43826 429 aa13.54□□□□□ -0.24
CHD4-211ENST00000544484 DIAPH2O60879 1101 aa13.54□□□□□ -0.24
CHD4-211ENST00000544484 EEF1B2P24534 225 aaKnown RBP13.54□□□□□ -0.24
CHD4-211ENST00000544484 SZRD1Q7Z422 152 aa13.54□□□□□ -0.24
CHD4-211ENST00000544484 RASSF3Q86WH2 238 aa13.54□□□□□ -0.24
CHD4-211ENST00000544484 ZKSCAN4Q969J2 545 aaPredicted RBP13.54□□□□□ -0.24
CHD4-211ENST00000544484 CCDC138Q96M89 665 aa13.54□□□□□ -0.24
CHD4-211ENST00000544484 APOL1O14791 398 aa13.54□□□□□ -0.24
CHD4-211ENST00000544484 MGEA5O60502 916 aa13.54□□□□□ -0.24
CHD4-211ENST00000544484 ZNF157P51786 506 aaPredicted RBP13.54□□□□□ -0.24
CHD4-211ENST00000544484 RPS6P62753 249 aaKnown RBP13.54□□□□□ -0.24
CHD4-211ENST00000544484 TMEM132DQ14C87 1099 aa13.54□□□□□ -0.24
CHD4-211ENST00000544484 BARGINQ6ZT62 677 aa13.54□□□□□ -0.24
CHD4-211ENST00000544484 ACER1Q8TDN7 264 aa13.54□□□□□ -0.24
CHD4-211ENST00000544484 MCEEQ96PE7 176 aa13.54□□□□□ -0.24
CHD4-211ENST00000544484 SERPINI1Q99574 410 aa13.54□□□□□ -0.24
CHD4-211ENST00000544484 ANLNQ9NQW6 1124 aa13.54□□□□□ -0.24
CHD4-211ENST00000544484 FAM49BQ9NUQ9 324 aa13.54□□□□□ -0.24
CHD4-211ENST00000544484 DLC1Q96QB1 1528 aa13.54□□□□□ -0.24
CHD4-211ENST00000544484 KCNN4O15554 427 aa13.54□□□□□ -0.24
CHD4-211ENST00000544484 WEE2P0C1S8 567 aa13.54□□□□□ -0.24
CHD4-211ENST00000544484 MTM1Q13496 603 aa13.54□□□□□ -0.24
CHD4-211ENST00000544484 GJB7Q6PEY0 223 aa13.54□□□□□ -0.24
CHD4-211ENST00000544484 TC2NQ8N9U0 490 aa13.54□□□□□ -0.24
CHD4-211ENST00000544484 ATP11CQ8NB49 1132 aa13.54□□□□□ -0.24
CHD4-211ENST00000544484 GOLPH3Q9H4A6 298 aa13.54□□□□□ -0.24
CHD4-211ENST00000544484 CNTNAP4Q9C0A0 1308 aa13.54□□□□□ -0.24
CHD4-211ENST00000544484 KPNA7A9QM74 516 aa13.54□□□□□ -0.24
CHD4-211ENST00000544484 TADA3O75528 432 aa13.54□□□□□ -0.24
CHD4-211ENST00000544484 RPA1P27694 616 aa13.54□□□□□ -0.24
CHD4-211ENST00000544484 CDK17Q00537 523 aa13.54□□□□□ -0.24
CHD4-211ENST00000544484 KRT80Q6KB66 452 aa13.54□□□□□ -0.24
CHD4-211ENST00000544484 TTC8Q8TAM2 541 aa13.54□□□□□ -0.24
CHD4-211ENST00000544484 TGS1Q96RS0 853 aaKnown RBP13.54□□□□□ -0.24
CHD4-211ENST00000544484 MOV10L1Q9BXT6 1211 aaKnown RBP13.54□□□□□ -0.24
CHD4-211ENST00000544484 POLLQ9UGP5 575 aa13.54□□□□□ -0.24
CHD4-211ENST00000544484 E5RI56 91 aa13.53□□□□□ -0.24
CHD4-211ENST00000544484 SULT1E1P49888 294 aa13.53□□□□□ -0.24
CHD4-211ENST00000544484 RBP5P82980 135 aa13.53□□□□□ -0.24
CHD4-211ENST00000544484 SNAPC2Q13487 334 aa13.53□□□□□ -0.24
CHD4-211ENST00000544484 ASIC4Q96FT7 647 aa13.53□□□□□ -0.24
CHD4-211ENST00000544484 TIPINQ9BVW5 301 aa13.53□□□□□ -0.24
CHD4-211ENST00000544484 HACL1Q9UJ83 578 aa13.53□□□□□ -0.24
CHD4-211ENST00000544484 SPATA31A6Q5VVP1 1343 aa13.53□□□□□ -0.24
CHD4-211ENST00000544484 STK25O00506 426 aa13.53□□□□□ -0.24
CHD4-211ENST00000544484 MAP3K7O43318 606 aa13.53□□□□□ -0.24
CHD4-211ENST00000544484 TYK2P29597 1187 aa13.53□□□□□ -0.24
CHD4-211ENST00000544484 TXNRD3Q86VQ6 643 aa13.53□□□□□ -0.24
CHD4-211ENST00000544484 RMDN1Q96DB5 314 aa13.53□□□□□ -0.24
CHD4-211ENST00000544484 PRMT6Q96LA8 375 aaPredicted RBP13.53□□□□□ -0.24
CHD4-211ENST00000544484 AFF4Q9UHB7 1163 aaKnown RBP13.53□□□□□ -0.24
CHD4-211ENST00000544484 ZFP69BQ9UJL9 534 aa13.53□□□□□ -0.24
CHD4-211ENST00000544484 GMNCA6NCL1 334 aa13.53□□□□□ -0.24
CHD4-211ENST00000544484 APPL2Q8NEU8 664 aa13.53□□□□□ -0.24
CHD4-211ENST00000544484 PIDD1Q9HB75 910 aa13.53□□□□□ -0.24
CHD4-211ENST00000544484 GH1P01241 217 aa13.53□□□□□ -0.24
CHD4-211ENST00000544484 HMBSP08397 361 aa13.53□□□□□ -0.24
CHD4-211ENST00000544484 NR1H3Q13133 447 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms