RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 MYO6Q9UM54 1294 aa32.94■■■□□ 2.86
CCM2-219ENST00000544363 PTPRJQ12913 1337 aa32.93■■■□□ 2.86
CCM2-219ENST00000544363 A0A0U1RQG5 324 aaPredicted RBP32.93■■■□□ 2.86
CCM2-219ENST00000544363 ZNF500O60304 480 aaPredicted RBP32.93■■■□□ 2.86
CCM2-219ENST00000544363 CCL5P13501 91 aa32.93■■■□□ 2.86
CCM2-219ENST00000544363 AP3M2P53677 418 aa32.93■■■□□ 2.86
CCM2-219ENST00000544363 CDK17Q00537 523 aa32.93■■■□□ 2.86
CCM2-219ENST00000544363 IQCEQ6IPM2 695 aa32.93■■■□□ 2.86
CCM2-219ENST00000544363 SLC27A1Q6PCB7 646 aa32.93■■■□□ 2.86
CCM2-219ENST00000544363 GJB7Q6PEY0 223 aa32.93■■■□□ 2.86
CCM2-219ENST00000544363 WDR49Q8IV35 697 aa32.93■■■□□ 2.86
CCM2-219ENST00000544363 TMEM192Q8IY95 271 aa32.93■■■□□ 2.86
CCM2-219ENST00000544363 C17orf53Q8N3J3 647 aaPredicted RBP32.93■■■□□ 2.86
CCM2-219ENST00000544363 TAS1R2Q8TE23 839 aa32.93■■■□□ 2.86
CCM2-219ENST00000544363 DEFB118Q96PH6 123 aa32.93■■■□□ 2.86
CCM2-219ENST00000544363 CHP1Q99653 195 aa32.93■■■□□ 2.86
CCM2-219ENST00000544363 NOD1Q9Y239 953 aa32.93■■■□□ 2.86
CCM2-219ENST00000544363 DNM1LO00429 736 aa32.92■■■□□ 2.86
CCM2-219ENST00000544363 IL18RAPO95256 599 aa32.92■■■□□ 2.86
CCM2-219ENST00000544363 MYCP01106 439 aaPredicted RBP32.92■■■□□ 2.86
CCM2-219ENST00000544363 MGAT3Q09327 533 aa32.92■■■□□ 2.86
CCM2-219ENST00000544363 E4F1Q66K89 784 aaPredicted RBP32.92■■■□□ 2.86
CCM2-219ENST00000544363 SEMA4DQ92854 862 aa32.92■■■□□ 2.86
CCM2-219ENST00000544363 FAM212AQ96EL1 285 aa32.92■■■□□ 2.86
CCM2-219ENST00000544363 SENP6Q9GZR1 1112 aaPredicted RBP32.92■■■□□ 2.86
CCM2-219ENST00000544363 RNF208Q9H0X6 261 aa32.92■■■□□ 2.86
CCM2-219ENST00000544363 RAB20Q9NX57 234 aa32.92■■■□□ 2.86
CCM2-219ENST00000544363 CHRNA1P02708 482 aa32.91■■■□□ 2.86
CCM2-219ENST00000544363 RFX1P22670 979 aa32.91■■■□□ 2.86
CCM2-219ENST00000544363 SFMBT2Q5VUG0 894 aa32.91■■■□□ 2.86
CCM2-219ENST00000544363 PHLDB3Q6NSJ2 640 aa32.91■■■□□ 2.86
CCM2-219ENST00000544363 FAM84AQ96KN4 292 aa32.91■■■□□ 2.86
CCM2-219ENST00000544363 SPAG5Q96R06 1193 aa32.91■■■□□ 2.86
CCM2-219ENST00000544363 DNAJC12Q9UKB3 198 aa32.91■■■□□ 2.86
CCM2-219ENST00000544363 AJAP1Q9UKB5 411 aaPredicted RBP32.91■■■□□ 2.86
CCM2-219ENST00000544363 NOC2LQ9Y3T9 749 aaKnown RBP32.91■■■□□ 2.86
CCM2-219ENST00000544363 LRRN2O75325 713 aa32.91■■■□□ 2.86
CCM2-219ENST00000544363 NPTXRO95502 500 aa32.91■■■□□ 2.86
CCM2-219ENST00000544363 CTSHP09668 335 aa32.91■■■□□ 2.86
CCM2-219ENST00000544363 CXCL8P10145 99 aa32.91■■■□□ 2.86
CCM2-219ENST00000544363 THPOP40225 353 aa32.91■■■□□ 2.86
CCM2-219ENST00000544363 TDRD10Q5VZ19 366 aaKnown RBP32.91■■■□□ 2.86
CCM2-219ENST00000544363 RAD9BQ6WBX8 426 aa32.91■■■□□ 2.86
CCM2-219ENST00000544363 FAM228AQ86W67 206 aa32.91■■■□□ 2.86
CCM2-219ENST00000544363 PIN4Q9Y237 131 aaKnown RBP32.91■■■□□ 2.86
CCM2-219ENST00000544363 B4GALT4O60513 344 aa32.9■■■□□ 2.86
CCM2-219ENST00000544363 GRM5P41594 1212 aa32.9■■■□□ 2.86
CCM2-219ENST00000544363 JAM2P57087 298 aa32.9■■■□□ 2.86
CCM2-219ENST00000544363 MTF1Q14872 753 aa32.9■■■□□ 2.86
CCM2-219ENST00000544363 CTU1Q7Z7A3 348 aaKnown RBP32.9■■■□□ 2.86
CCM2-219ENST00000544363 OR5B17Q8NGF7 314 aa32.9■■■□□ 2.86
CCM2-219ENST00000544363 DHX38Q92620 1227 aaKnown RBP32.9■■■□□ 2.86
CCM2-219ENST00000544363 KCND1Q9NSA2 647 aa32.9■■■□□ 2.86
CCM2-219ENST00000544363 OGDHLQ9ULD0 1010 aa32.9■■■□□ 2.86
CCM2-219ENST00000544363 HSPA8P11142 646 aaKnown RBP32.89■■■□□ 2.86
CCM2-219ENST00000544363 BIRC3Q13489 604 aa32.89■■■□□ 2.86
CCM2-219ENST00000544363 RAPGEF1Q13905 1077 aa32.89■■■□□ 2.86
CCM2-219ENST00000544363 STK33Q9BYT3 514 aa32.89■■■□□ 2.86
CCM2-219ENST00000544363 AIPL1Q9NZN9 384 aa32.89■■■□□ 2.86
CCM2-219ENST00000544363 ARVCFO00192 962 aa32.88■■■□□ 2.85
CCM2-219ENST00000544363 TRIM71Q2Q1W2 868 aaKnown RBP32.88■■■□□ 2.85
CCM2-219ENST00000544363 ACAP3Q96P50 834 aa32.88■■■□□ 2.85
CCM2-219ENST00000544363 SEZ6LQ9BYH1 1024 aa32.88■■■□□ 2.85
CCM2-219ENST00000544363 RPS6KA5O75582 802 aa32.88■■■□□ 2.85
CCM2-219ENST00000544363 HLA-DRAP01903 254 aa32.88■■■□□ 2.85
CCM2-219ENST00000544363 DUOXA2Q1HG44 320 aa32.88■■■□□ 2.85
CCM2-219ENST00000544363 ARHGEF19Q8IW93 802 aa32.88■■■□□ 2.85
CCM2-219ENST00000544363 EIF2AQ9BY44 585 aaKnown RBP32.88■■■□□ 2.85
CCM2-219ENST00000544363 UBE2TQ9NPD8 197 aaPredicted RBP32.88■■■□□ 2.85
CCM2-219ENST00000544363 MROH7Q68CQ1 1323 aa32.87■■■□□ 2.85
CCM2-219ENST00000544363 LACTBL1A8MY62 500 aa32.87■■■□□ 2.85
CCM2-219ENST00000544363 ZC3H11AO75152 810 aaKnown RBP eCLIP32.87■■■□□ 2.85
CCM2-219ENST00000544363 VNN1O95497 513 aa32.87■■■□□ 2.85
CCM2-219ENST00000544363 SLC10A6Q3KNW5 377 aa32.87■■■□□ 2.85
CCM2-219ENST00000544363 TOGARAM2Q6ZUX3 1019 aa32.87■■■□□ 2.85
CCM2-219ENST00000544363 CCAR2Q8N163 923 aaKnown RBP32.87■■■□□ 2.85
CCM2-219ENST00000544363 CCDC94Q9BW85 323 aaPredicted RBP32.87■■■□□ 2.85
CCM2-219ENST00000544363 ASB7Q9H672 318 aa32.87■■■□□ 2.85
CCM2-219ENST00000544363 CEP350Q5VT06 3117 aa32.87■■■□□ 2.85
CCM2-219ENST00000544363 ANK1P16157 1881 aa32.87■■■□□ 2.85
CCM2-219ENST00000544363 MEFVO15553 781 aaPredicted RBP32.86■■■□□ 2.85
CCM2-219ENST00000544363 PIK3CAP42336 1068 aa32.86■■■□□ 2.85
CCM2-219ENST00000544363 FAM26DQ5JW98 314 aa32.86■■■□□ 2.85
CCM2-219ENST00000544363 EFCAB13Q8IY85 973 aa32.86■■■□□ 2.85
CCM2-219ENST00000544363 NT5C1BQ96P26 610 aa32.86■■■□□ 2.85
CCM2-219ENST00000544363 TRPV6Q9H1D0 765 aa32.86■■■□□ 2.85
CCM2-219ENST00000544363 NHEJ1Q9H9Q4 299 aaPredicted RBP32.86■■■□□ 2.85
CCM2-219ENST00000544363 SPTLC3Q9NUV7 552 aa32.86■■■□□ 2.85
CCM2-219ENST00000544363 ARHGAP20Q9P2F6 1191 aa32.86■■■□□ 2.85
CCM2-219ENST00000544363 CAND2O75155 1236 aa32.85■■■□□ 2.85
CCM2-219ENST00000544363 DRAP1Q14919 205 aaPredicted RBP32.85■■■□□ 2.85
CCM2-219ENST00000544363 ASIC2Q16515 512 aa32.85■■■□□ 2.85
CCM2-219ENST00000544363 TRIM6Q9C030 488 aaPredicted RBP32.85■■■□□ 2.85
CCM2-219ENST00000544363 MTMR12Q9C0I1 747 aa32.85■■■□□ 2.85
CCM2-219ENST00000544363 ST3GAL5Q9UNP4 418 aa32.85■■■□□ 2.85
CCM2-219ENST00000544363 PHACTR2O75167 634 aa32.84■■■□□ 2.85
CCM2-219ENST00000544363 STAT1P42224 750 aa32.84■■■□□ 2.85
CCM2-219ENST00000544363 HGSNATQ68CP4 663 aa32.84■■■□□ 2.85
CCM2-219ENST00000544363 FBXO46Q6PJ61 603 aaPredicted RBP32.84■■■□□ 2.85
CCM2-219ENST00000544363 TRAPPC11Q7Z392 1133 aa32.84■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms