RNA–Protein interactions for RNA: ENST00000540269.6

USP10-202, Transcript of ubiquitin specific peptidase 10, humanhuman

TSL 1 (best)

Gene USP10, Length 3,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP10-202ENST00000540269 MYH9P35579 1960 aaKnown RBP13.3□□□□□ -0.28
USP10-202ENST00000540269 VNN1O95497 513 aa13.3□□□□□ -0.28
USP10-202ENST00000540269 DHX9Q08211 1270 aaKnown RBP13.3□□□□□ -0.28
USP10-202ENST00000540269 SIX1Q15475 284 aaPredicted RBP13.3□□□□□ -0.28
USP10-202ENST00000540269 BRDTQ58F21 947 aaPredicted RBP13.3□□□□□ -0.28
USP10-202ENST00000540269 TDRD10Q5VZ19 366 aaKnown RBP13.3□□□□□ -0.28
USP10-202ENST00000540269 JAMLQ86YT9 394 aa13.3□□□□□ -0.28
USP10-202ENST00000540269 SLC17A8Q8NDX2 589 aa13.3□□□□□ -0.28
USP10-202ENST00000540269 MCPH1Q8NEM0 835 aa13.3□□□□□ -0.28
USP10-202ENST00000540269 HERPUD2Q9BSE4 406 aa13.3□□□□□ -0.28
USP10-202ENST00000540269 TXLNGYQ9BZA5 131 aa13.3□□□□□ -0.28
USP10-202ENST00000540269 CENPHQ9H3R5 247 aa13.3□□□□□ -0.28
USP10-202ENST00000540269 BTBD7Q9P203 1132 aa13.3□□□□□ -0.28
USP10-202ENST00000540269 CTNNA1P35221 906 aaKnown RBP13.29□□□□□ -0.28
USP10-202ENST00000540269 ERP44Q9BS26 406 aa13.29□□□□□ -0.28
USP10-202ENST00000540269 C17orf75Q9HAS0 396 aa13.29□□□□□ -0.28
USP10-202ENST00000540269 APOBEC3GQ9HC16 384 aaKnown RBP13.29□□□□□ -0.28
USP10-202ENST00000540269 UMODL1Q5DID0 1318 aa13.29□□□□□ -0.28
USP10-202ENST00000540269 C19orf81C9J6K1 198 aa13.29□□□□□ -0.28
USP10-202ENST00000540269 KIAA0391O15091 583 aaKnown RBP13.29□□□□□ -0.28
USP10-202ENST00000540269 NR1D1P20393 614 aa13.29□□□□□ -0.28
USP10-202ENST00000540269 GARTP22102 1010 aa13.29□□□□□ -0.28
USP10-202ENST00000540269 KCNJ1P48048 391 aa13.29□□□□□ -0.28
USP10-202ENST00000540269 CCT5P48643 541 aa13.29□□□□□ -0.28
USP10-202ENST00000540269 PDE6CP51160 858 aa13.29□□□□□ -0.28
USP10-202ENST00000540269 XKR3Q5GH77 459 aa13.29□□□□□ -0.28
USP10-202ENST00000540269 KDM7AQ6ZMT4 941 aa13.29□□□□□ -0.28
USP10-202ENST00000540269 CPA5Q8WXQ8 436 aa13.29□□□□□ -0.28
USP10-202ENST00000540269 VTI1AQ96AJ9 217 aa13.29□□□□□ -0.28
USP10-202ENST00000540269 TARS2Q9BW92 718 aaKnown RBP13.29□□□□□ -0.28
USP10-202ENST00000540269 GRHL1Q9NZI5 618 aa13.29□□□□□ -0.28
USP10-202ENST00000540269 GTF3C4Q9UKN8 822 aa13.29□□□□□ -0.28
USP10-202ENST00000540269 PNMA2Q9UL42 364 aa13.29□□□□□ -0.28
USP10-202ENST00000540269 DIS3Q9Y2L1 958 aaKnown RBP13.29□□□□□ -0.28
USP10-202ENST00000540269 UTP11Q9Y3A2 253 aaKnown RBP13.29□□□□□ -0.28
USP10-202ENST00000540269 PCDHA3Q9Y5H8 950 aa13.29□□□□□ -0.28
USP10-202ENST00000540269 MYPNQ86TC9 1320 aa13.29□□□□□ -0.28
USP10-202ENST00000540269 MYO1CO00159 1063 aa13.28□□□□□ -0.28
USP10-202ENST00000540269 CLSTN1O94985 981 aa13.28□□□□□ -0.28
USP10-202ENST00000540269 LIG4P49917 911 aa13.28□□□□□ -0.28
USP10-202ENST00000540269 RTP1P59025 263 aa13.28□□□□□ -0.28
USP10-202ENST00000540269 CLEC16AQ2KHT3 1053 aa13.28□□□□□ -0.28
USP10-202ENST00000540269 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.28□□□□□ -0.286e-7■■■■□ 19.8
USP10-202ENST00000540269 FBXO25Q8TCJ0 367 aa13.28□□□□□ -0.28
USP10-202ENST00000540269 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.28□□□□□ -0.284e-7■■■■■ 58.1
USP10-202ENST00000540269 RPS6KC1Q96S38 1066 aa13.28□□□□□ -0.28
USP10-202ENST00000540269 CNOT8Q9UFF9 292 aaKnown RBP13.28□□□□□ -0.28
USP10-202ENST00000540269 MAFBQ9Y5Q3 323 aaPredicted RBP13.28□□□□□ -0.28
USP10-202ENST00000540269 MIF4GDA9UHW6 222 aaKnown RBP13.28□□□□□ -0.28
USP10-202ENST00000540269 O00370 1275 aa13.28□□□□□ -0.28
USP10-202ENST00000540269 USP2O75604 605 aaPredicted RBP13.28□□□□□ -0.28
USP10-202ENST00000540269 HLA-DRAP01903 254 aa13.28□□□□□ -0.28
USP10-202ENST00000540269 C4BPAP04003 597 aaKnown RBP13.28□□□□□ -0.28
USP10-202ENST00000540269 RARAP10276 462 aa13.28□□□□□ -0.28
USP10-202ENST00000540269 CTNNA2P26232 953 aa13.28□□□□□ -0.28
USP10-202ENST00000540269 HPDP32754 393 aaPredicted RBP13.28□□□□□ -0.28
USP10-202ENST00000540269 RPL21P46778 160 aaKnown RBP13.28□□□□□ -0.28
USP10-202ENST00000540269 POLGP54098 1239 aaPredicted RBP13.28□□□□□ -0.28
USP10-202ENST00000540269 IRX5P78411 483 aaPredicted RBP13.28□□□□□ -0.28
USP10-202ENST00000540269 ACAD10Q6JQN1 1059 aa13.28□□□□□ -0.28
USP10-202ENST00000540269 MIS18BP1Q6P0N0 1132 aa13.28□□□□□ -0.28
USP10-202ENST00000540269 BCAS4Q8TDM0 211 aa13.28□□□□□ -0.28
USP10-202ENST00000540269 PSPC1Q8WXF1 523 aaKnown RBP13.28□□□□□ -0.28
USP10-202ENST00000540269 MTFR1LQ9H019 292 aa13.28□□□□□ -0.28
USP10-202ENST00000540269 GPRC5DQ9NZD1 345 aa13.28□□□□□ -0.28
USP10-202ENST00000540269 CWC15Q9P013 229 aaKnown RBP13.28□□□□□ -0.28
USP10-202ENST00000540269 ATP8A1Q9Y2Q0 1164 aa13.28□□□□□ -0.28
USP10-202ENST00000540269 SNCAIPQ9Y6H5 919 aa13.28□□□□□ -0.28
USP10-202ENST00000540269 LTBP3Q9NS15 1303 aa13.28□□□□□ -0.28
USP10-202ENST00000540269 GSTTP1A0A1W2PQM5 241 aa13.28□□□□□ -0.28
USP10-202ENST00000540269 LRRIQ4A6NIV6 560 aa13.28□□□□□ -0.28
USP10-202ENST00000540269 EXTL3O43909 919 aa13.28□□□□□ -0.28
USP10-202ENST00000540269 ZEB2O60315 1214 aa13.28□□□□□ -0.28
USP10-202ENST00000540269 PHF2O75151 1096 aa13.28□□□□□ -0.28
USP10-202ENST00000540269 ATG7O95352 703 aa13.28□□□□□ -0.28
USP10-202ENST00000540269 SHBGP04278 402 aa13.28□□□□□ -0.28
USP10-202ENST00000540269 UNGP13051 313 aaPredicted RBP13.28□□□□□ -0.28
USP10-202ENST00000540269 PLTPP55058 493 aa13.28□□□□□ -0.28
USP10-202ENST00000540269 ZACNQ401N2 412 aa13.28□□□□□ -0.28
USP10-202ENST00000540269 APOBEC3FQ8IUX4 373 aaKnown RBP13.28□□□□□ -0.28
USP10-202ENST00000540269 MAGOHBQ96A72 148 aaKnown RBP13.28□□□□□ -0.28
USP10-202ENST00000540269 LRRC45Q96CN5 670 aa13.28□□□□□ -0.28
USP10-202ENST00000540269 IFT74Q96LB3 600 aa13.28□□□□□ -0.28
USP10-202ENST00000540269 SGIP1Q9BQI5 828 aa13.28□□□□□ -0.28
USP10-202ENST00000540269 DHX33Q9H6R0 707 aaKnown RBP13.28□□□□□ -0.28
USP10-202ENST00000540269 ZNF302Q9NR11 478 aa13.28□□□□□ -0.28
USP10-202ENST00000540269 FAM114A2Q9NRY5 505 aa13.28□□□□□ -0.28
USP10-202ENST00000540269 WDR90Q96KV7 1748 aa13.28□□□□□ -0.28
USP10-202ENST00000540269 SPOPO43791 374 aa13.27□□□□□ -0.28
USP10-202ENST00000540269 OATP04181 439 aa13.27□□□□□ -0.28
USP10-202ENST00000540269 UBA1P22314 1058 aaKnown RBP13.27□□□□□ -0.28
USP10-202ENST00000540269 RRM1P23921 792 aa13.27□□□□□ -0.28
USP10-202ENST00000540269 GTF2H1P32780 548 aa13.27□□□□□ -0.28
USP10-202ENST00000540269 VGLL4Q14135 290 aa13.27□□□□□ -0.28
USP10-202ENST00000540269 LRIG3Q6UXM1 1119 aa13.27□□□□□ -0.28
USP10-202ENST00000540269 EEPD1Q7L9B9 569 aa13.27□□□□□ -0.28
USP10-202ENST00000540269 UBL4BQ8N7F7 174 aa13.27□□□□□ -0.28
USP10-202ENST00000540269 OR5B17Q8NGF7 314 aa13.27□□□□□ -0.28
USP10-202ENST00000540269 FBXO40Q9UH90 709 aa13.27□□□□□ -0.28
USP10-202ENST00000540269 SOWAHBA6NEL2 793 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms