RNA–Protein interactions for RNA: ENST00000534753.5

CCDC90B-219, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-219ENST00000534753 SF3A1Q15459 793 aaKnown RBP9.86□□□□□ -0.83
CCDC90B-219ENST00000534753 FAM173BQ6P4H8 233 aa9.86□□□□□ -0.83
CCDC90B-219ENST00000534753 AGMOQ6ZNB7 445 aa9.86□□□□□ -0.83
CCDC90B-219ENST00000534753 ZNF280BQ86YH2 543 aa9.86□□□□□ -0.83
CCDC90B-219ENST00000534753 TSEN2Q8NCE0 465 aaKnown RBP9.86□□□□□ -0.83
CCDC90B-219ENST00000534753 SMG8Q8ND04 991 aaKnown RBP9.86□□□□□ -0.83
CCDC90B-219ENST00000534753 MRPS27Q92552 414 aaKnown RBP9.86□□□□□ -0.83
CCDC90B-219ENST00000534753 PABPC5Q96DU9 382 aaKnown RBP9.86□□□□□ -0.83
CCDC90B-219ENST00000534753 TMEM169Q96HH4 297 aa9.86□□□□□ -0.83
CCDC90B-219ENST00000534753 TCF25Q9BQ70 676 aa9.86□□□□□ -0.83
CCDC90B-219ENST00000534753 CSRNP2Q9H175 543 aa9.86□□□□□ -0.83
CCDC90B-219ENST00000534753 PLXNA4Q9HCM2 1894 aa9.86□□□□□ -0.83
CCDC90B-219ENST00000534753 KLK14Q9P0G3 267 aa9.86□□□□□ -0.83
CCDC90B-219ENST00000534753 DNAJB4Q9UDY4 337 aa9.86□□□□□ -0.83
CCDC90B-219ENST00000534753 TNFRSF10AO00220 468 aa9.85□□□□□ -0.83
CCDC90B-219ENST00000534753 ZNF623O75123 536 aa9.85□□□□□ -0.83
CCDC90B-219ENST00000534753 HIP1RO75146 1068 aa9.85□□□□□ -0.83
CCDC90B-219ENST00000534753 EYA4O95677 639 aa9.85□□□□□ -0.83
CCDC90B-219ENST00000534753 PRKCBP05771 671 aa9.85□□□□□ -0.83
CCDC90B-219ENST00000534753 IL9P15248 144 aa9.85□□□□□ -0.83
CCDC90B-219ENST00000534753 NCLP19338 710 aaKnown RBP9.85□□□□□ -0.83
CCDC90B-219ENST00000534753 SYT1P21579 422 aa9.85□□□□□ -0.83
CCDC90B-219ENST00000534753 MUTP22033 750 aa9.85□□□□□ -0.83
CCDC90B-219ENST00000534753 AXLP30530 894 aa9.85□□□□□ -0.83
CCDC90B-219ENST00000534753 PPM1AP35813 382 aa9.85□□□□□ -0.83
CCDC90B-219ENST00000534753 MLH1P40692 756 aa9.85□□□□□ -0.83
CCDC90B-219ENST00000534753 UBA7P41226 1012 aa9.85□□□□□ -0.83
CCDC90B-219ENST00000534753 PEX3P56589 373 aa9.85□□□□□ -0.83
CCDC90B-219ENST00000534753 RBM10P98175 930 aaKnown RBP9.85□□□□□ -0.83
CCDC90B-219ENST00000534753 UBE3AQ05086 875 aa9.85□□□□□ -0.83
CCDC90B-219ENST00000534753 DLX2Q07687 328 aaPredicted RBP9.85□□□□□ -0.83
CCDC90B-219ENST00000534753 PRPF4BQ13523 1007 aaKnown RBP9.85□□□□□ -0.83
CCDC90B-219ENST00000534753 PPP2R5AQ15172 486 aa9.85□□□□□ -0.83
CCDC90B-219ENST00000534753 MAPK6Q16659 721 aa9.85□□□□□ -0.83
CCDC90B-219ENST00000534753 SLC27A1Q6PCB7 646 aa9.85□□□□□ -0.83
CCDC90B-219ENST00000534753 KCNK18Q7Z418 384 aa9.85□□□□□ -0.83
CCDC90B-219ENST00000534753 BRAPQ7Z569 592 aa9.85□□□□□ -0.83
CCDC90B-219ENST00000534753 MRPL10Q7Z7H8 261 aaKnown RBP9.85□□□□□ -0.83
CCDC90B-219ENST00000534753 CABP7Q86V35 215 aa9.85□□□□□ -0.83
CCDC90B-219ENST00000534753 HSCBQ8IWL3 235 aa9.85□□□□□ -0.83
CCDC90B-219ENST00000534753 HACE1Q8IYU2 909 aa9.85□□□□□ -0.83
CCDC90B-219ENST00000534753 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.85□□□□□ -0.83
CCDC90B-219ENST00000534753 AUTS2Q8WXX7 1259 aa9.85□□□□□ -0.83
CCDC90B-219ENST00000534753 KIFAP3Q92845 792 aa9.85□□□□□ -0.83
CCDC90B-219ENST00000534753 GAD1Q99259 594 aa9.85□□□□□ -0.83
CCDC90B-219ENST00000534753 MMTAG2Q9BU76 263 aaKnown RBP9.85□□□□□ -0.83
CCDC90B-219ENST00000534753 RUSC1Q9BVN2 902 aa9.85□□□□□ -0.83
CCDC90B-219ENST00000534753 APOL5Q9BWW9 433 aa9.85□□□□□ -0.83
CCDC90B-219ENST00000534753 C2orf40Q9H1Z8 148 aa9.85□□□□□ -0.83
CCDC90B-219ENST00000534753 NXF3Q9H4D5 531 aaKnown RBP9.85□□□□□ -0.83
CCDC90B-219ENST00000534753 NRDE2Q9H7Z3 1164 aa9.85□□□□□ -0.83
CCDC90B-219ENST00000534753 PRMT7Q9NVM4 692 aaPredicted RBP9.85□□□□□ -0.83
CCDC90B-219ENST00000534753 PRG3Q9Y2Y8 225 aaPredicted RBP9.85□□□□□ -0.83
CCDC90B-219ENST00000534753 CLIC4Q9Y696 253 aa9.85□□□□□ -0.83
CCDC90B-219ENST00000534753 CNTNAP2Q9UHC6 1331 aa9.84□□□□□ -0.83
CCDC90B-219ENST00000534753 NPHP3-ACAD11A0A0J9YXS1 232 aa9.84□□□□□ -0.83
CCDC90B-219ENST00000534753 ARL5CA6NH57 179 aa9.84□□□□□ -0.83
CCDC90B-219ENST00000534753 HIDE1A8MVS5 230 aa9.84□□□□□ -0.83
CCDC90B-219ENST00000534753 NCK2O43639 380 aa9.84□□□□□ -0.83
CCDC90B-219ENST00000534753 DDHD2O94830 711 aa9.84□□□□□ -0.83
CCDC90B-219ENST00000534753 CXCL14O95715 111 aa9.84□□□□□ -0.83
CCDC90B-219ENST00000534753 ADH1CP00326 375 aa9.84□□□□□ -0.83
CCDC90B-219ENST00000534753 ALDH2P05091 517 aa9.84□□□□□ -0.83
CCDC90B-219ENST00000534753 MARCKSP29966 332 aaPredicted RBP9.84□□□□□ -0.83
CCDC90B-219ENST00000534753 NAMPTP43490 491 aa9.84□□□□□ -0.83
CCDC90B-219ENST00000534753 OR1G1P47890 313 aa9.84□□□□□ -0.83
CCDC90B-219ENST00000534753 SLC11A1P49279 550 aa9.84□□□□□ -0.83
CCDC90B-219ENST00000534753 SCNN1GP51170 649 aa9.84□□□□□ -0.83
CCDC90B-219ENST00000534753 PLCB3Q01970 1234 aa9.84□□□□□ -0.83
CCDC90B-219ENST00000534753 GRIN1Q05586 938 aa9.84□□□□□ -0.83
CCDC90B-219ENST00000534753 POU5F1BQ06416 359 aa9.84□□□□□ -0.83
CCDC90B-219ENST00000534753 ADAM15Q13444 863 aa9.84□□□□□ -0.83
CCDC90B-219ENST00000534753 PCBP1Q15365 356 aaKnown RBP eCLIP9.84□□□□□ -0.83
CCDC90B-219ENST00000534753 SWI5Q1ZZU3 235 aa9.84□□□□□ -0.83
CCDC90B-219ENST00000534753 FOXD4L6Q3SYB3 417 aaPredicted RBP9.84□□□□□ -0.83
CCDC90B-219ENST00000534753 LEXMQ3ZCV2 418 aa9.84□□□□□ -0.83
CCDC90B-219ENST00000534753 SPECC1Q5M775 1068 aa9.84□□□□□ -0.83
CCDC90B-219ENST00000534753 FOXD4L3Q6VB84 417 aaPredicted RBP9.84□□□□□ -0.83
CCDC90B-219ENST00000534753 TMEM173Q86WV6 379 aaPredicted RBP9.84□□□□□ -0.83
CCDC90B-219ENST00000534753 VPS52Q8N1B4 723 aa9.84□□□□□ -0.83
CCDC90B-219ENST00000534753 SLC39A11Q8N1S5 342 aa9.84□□□□□ -0.83
CCDC90B-219ENST00000534753 CNNM3Q8NE01 707 aa9.84□□□□□ -0.83
CCDC90B-219ENST00000534753 RABGGTAQ92696 567 aa9.84□□□□□ -0.83
CCDC90B-219ENST00000534753 CALML4Q96GE6 196 aa9.84□□□□□ -0.83
CCDC90B-219ENST00000534753 ZFP42Q96MM3 310 aa9.84□□□□□ -0.83
CCDC90B-219ENST00000534753 PNMA5Q96PV4 448 aa9.84□□□□□ -0.83
CCDC90B-219ENST00000534753 BARX2Q9UMQ3 279 aaPredicted RBP9.84□□□□□ -0.83
CCDC90B-219ENST00000534753 FAN1Q9Y2M0 1017 aa9.84□□□□□ -0.83
CCDC90B-219ENST00000534753 GDAQ9Y2T3 454 aa9.84□□□□□ -0.83
CCDC90B-219ENST00000534753 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.83□□□□□ -0.84
CCDC90B-219ENST00000534753 TMEM229AB2RXF0 380 aa9.83□□□□□ -0.84
CCDC90B-219ENST00000534753 K7ERI5 159 aa9.83□□□□□ -0.84
CCDC90B-219ENST00000534753 C2CD2LO14523 706 aa9.83□□□□□ -0.84
CCDC90B-219ENST00000534753 N4BP3O15049 544 aa9.83□□□□□ -0.84
CCDC90B-219ENST00000534753 SLC16A4O15374 487 aa9.83□□□□□ -0.84
CCDC90B-219ENST00000534753 B4GALT3O60512 393 aa9.83□□□□□ -0.84
CCDC90B-219ENST00000534753 TBX10O75333 385 aa9.83□□□□□ -0.84
CCDC90B-219ENST00000534753 KRT18P05783 430 aaKnown RBP9.83□□□□□ -0.84
CCDC90B-219ENST00000534753 GALTP07902 379 aa9.83□□□□□ -0.84
CCDC90B-219ENST00000534753 PLA2G4BP0C869 781 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms