RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 MRFAP1L1Q96HT8 127 aa6.54□□□□□ -1.36
PTPRK-220ENST00000531466 FOXJ2Q9P0K8 574 aa6.54□□□□□ -1.36
PTPRK-220ENST00000531466 KCNG1Q9UIX4 513 aa6.54□□□□□ -1.36
PTPRK-220ENST00000531466 A0A1B0GTW7 788 aa6.53□□□□□ -1.36
PTPRK-220ENST00000531466 DNAJC9-AS1A6NH13 148 aa6.53□□□□□ -1.36
PTPRK-220ENST00000531466 RAB11FIP3O75154 756 aa6.53□□□□□ -1.36
PTPRK-220ENST00000531466 LSSP48449 732 aa6.53□□□□□ -1.36
PTPRK-220ENST00000531466 MRPS35P82673 323 aaKnown RBP6.53□□□□□ -1.36
PTPRK-220ENST00000531466 OCRLQ01968 901 aa6.53□□□□□ -1.36
PTPRK-220ENST00000531466 SEPT7Q16181 437 aaKnown RBP6.53□□□□□ -1.36
PTPRK-220ENST00000531466 FAM47AQ5JRC9 791 aa6.53□□□□□ -1.36
PTPRK-220ENST00000531466 SLC29A3Q9BZD2 475 aa6.53□□□□□ -1.36
PTPRK-220ENST00000531466 KLK15Q9H2R5 256 aa6.53□□□□□ -1.36
PTPRK-220ENST00000531466 TBCCD1Q9NVR7 557 aa6.53□□□□□ -1.36
PTPRK-220ENST00000531466 LRIT1Q9P2V4 623 aa6.53□□□□□ -1.36
PTPRK-220ENST00000531466 EDARQ9UNE0 448 aa6.53□□□□□ -1.36
PTPRK-220ENST00000531466 PNPLA7Q6ZV29 1317 aa6.52□□□□□ -1.37
PTPRK-220ENST00000531466 WNT10BO00744 389 aa6.52□□□□□ -1.37
PTPRK-220ENST00000531466 SNRPA1P09661 255 aaKnown RBP6.52□□□□□ -1.37
PTPRK-220ENST00000531466 ADCYAP1R1P41586 468 aa6.52□□□□□ -1.37
PTPRK-220ENST00000531466 SCNN1BP51168 640 aa6.52□□□□□ -1.37
PTPRK-220ENST00000531466 CACNA2D1P54289 1103 aa6.52□□□□□ -1.37
PTPRK-220ENST00000531466 IL2P60568 153 aa6.52□□□□□ -1.37
PTPRK-220ENST00000531466 CXADRP78310 365 aa6.52□□□□□ -1.37
PTPRK-220ENST00000531466 CT83Q5H943 113 aa6.52□□□□□ -1.37
PTPRK-220ENST00000531466 BROXQ5VW32 411 aa6.52□□□□□ -1.37
PTPRK-220ENST00000531466 TRMT2AQ8IZ69 625 aaKnown RBP6.52□□□□□ -1.37
PTPRK-220ENST00000531466 ACTRT2Q8TDY3 377 aa6.52□□□□□ -1.37
PTPRK-220ENST00000531466 SMG7Q92540 1137 aaKnown RBP6.52□□□□□ -1.37
PTPRK-220ENST00000531466 FUBP3Q96I24 572 aaKnown RBP eCLIP6.52□□□□□ -1.37
PTPRK-220ENST00000531466 COL3A1P02461 1466 aaPredicted RBP6.52□□□□□ -1.37
PTPRK-220ENST00000531466 RPTORQ8N122 1335 aa6.51□□□□□ -1.37
PTPRK-220ENST00000531466 CCDC78A2IDD5 438 aa6.51□□□□□ -1.37
PTPRK-220ENST00000531466 FGFR4P22455 802 aa6.51□□□□□ -1.37
PTPRK-220ENST00000531466 C11orf74Q86VG3 221 aa6.51□□□□□ -1.37
PTPRK-220ENST00000531466 AIFM2Q9BRQ8 373 aa6.51□□□□□ -1.37
PTPRK-220ENST00000531466 REXO4Q9GZR2 422 aaKnown RBP6.51□□□□□ -1.37
PTPRK-220ENST00000531466 GALNT9Q9HCQ5 603 aa6.51□□□□□ -1.37
PTPRK-220ENST00000531466 AATKQ6ZMQ8 1374 aa6.5□□□□□ -1.37
PTPRK-220ENST00000531466 FKBP9O95302 570 aa6.5□□□□□ -1.37
PTPRK-220ENST00000531466 ADSLP30566 484 aaPredicted RBP6.5□□□□□ -1.37
PTPRK-220ENST00000531466 SF3A1Q15459 793 aaKnown RBP6.5□□□□□ -1.37
PTPRK-220ENST00000531466 TCEA2Q15560 299 aa6.5□□□□□ -1.37
PTPRK-220ENST00000531466 MST1LQ2TV78 715 aa6.5□□□□□ -1.37
PTPRK-220ENST00000531466 FKBP9P1Q75LS8 142 aa6.5□□□□□ -1.37
PTPRK-220ENST00000531466 ZNF572Q7Z3I7 529 aaPredicted RBP6.5□□□□□ -1.37
PTPRK-220ENST00000531466 SCARB1Q8WTV0 552 aa6.5□□□□□ -1.37
PTPRK-220ENST00000531466 FUBP1Q96AE4 644 aaKnown RBP6.5□□□□□ -1.37
PTPRK-220ENST00000531466 RNPEPQ9H4A4 650 aa6.5□□□□□ -1.37
PTPRK-220ENST00000531466 IL17RBQ9NRM6 502 aa6.5□□□□□ -1.37
PTPRK-220ENST00000531466 ASB6Q9NWX5 421 aa6.5□□□□□ -1.37
PTPRK-220ENST00000531466 HSD11B2P80365 405 aa6.49□□□□□ -1.37
PTPRK-220ENST00000531466 SRSF4Q08170 494 aaKnown RBP6.49□□□□□ -1.37
PTPRK-220ENST00000531466 RRP12Q5JTH9 1297 aaKnown RBP6.49□□□□□ -1.37
PTPRK-220ENST00000531466 MICALCLQ6ZW33 695 aa6.49□□□□□ -1.37
PTPRK-220ENST00000531466 SYNPOQ8N3V7 929 aa6.49□□□□□ -1.37
PTPRK-220ENST00000531466 SH2D3CQ8N5H7 860 aa6.49□□□□□ -1.37
PTPRK-220ENST00000531466 OR2W6PQ8NHA6 318 aa6.49□□□□□ -1.37
PTPRK-220ENST00000531466 NACC2Q96BF6 587 aa6.49□□□□□ -1.37
PTPRK-220ENST00000531466 PDLIM2Q96JY6 352 aa6.49□□□□□ -1.37
PTPRK-220ENST00000531466 EMC7Q9NPA0 242 aa6.49□□□□□ -1.37
PTPRK-220ENST00000531466 TMEM74BQ9NUR3 256 aa6.49□□□□□ -1.37
PTPRK-220ENST00000531466 USP25Q9UHP3 1055 aa6.49□□□□□ -1.37
PTPRK-220ENST00000531466 NOC2LQ9Y3T9 749 aaKnown RBP6.49□□□□□ -1.37
PTPRK-220ENST00000531466 ARHGEF17Q96PE2 2063 aaPredicted RBP6.48□□□□□ -1.37
PTPRK-220ENST00000531466 ATRNL1Q5VV63 1379 aa6.48□□□□□ -1.37
PTPRK-220ENST00000531466 AKR1B10O60218 316 aa6.48□□□□□ -1.37
PTPRK-220ENST00000531466 PHF2O75151 1096 aa6.48□□□□□ -1.37
PTPRK-220ENST00000531466 ALOX15P16050 662 aaPredicted RBP6.48□□□□□ -1.37
PTPRK-220ENST00000531466 DHX37Q8IY37 1157 aaKnown RBP6.48□□□□□ -1.37
PTPRK-220ENST00000531466 DRC7Q8IY82 874 aa6.48□□□□□ -1.37
PTPRK-220ENST00000531466 ANKS1AQ92625 1134 aa6.48□□□□□ -1.37
PTPRK-220ENST00000531466 SLC5A5Q92911 643 aa6.48□□□□□ -1.37
PTPRK-220ENST00000531466 EAF2Q96CJ1 260 aaPredicted RBP6.48□□□□□ -1.37
PTPRK-220ENST00000531466 BOD1Q96IK1 185 aa6.48□□□□□ -1.37
PTPRK-220ENST00000531466 PAWRQ96IZ0 340 aaKnown RBP6.48□□□□□ -1.37
PTPRK-220ENST00000531466 MRI1Q9BV20 369 aa6.48□□□□□ -1.37
PTPRK-220ENST00000531466 TARS2Q9BW92 718 aaKnown RBP6.48□□□□□ -1.37
PTPRK-220ENST00000531466 ZSWIM4Q9H7M6 989 aa6.48□□□□□ -1.37
PTPRK-220ENST00000531466 SLC17A6Q9P2U8 582 aa6.48□□□□□ -1.37
PTPRK-220ENST00000531466 GPANK1O95872 356 aa6.47□□□□□ -1.37
PTPRK-220ENST00000531466 SLC6A2P23975 617 aa6.47□□□□□ -1.37
PTPRK-220ENST00000531466 PDCD1Q15116 288 aa6.47□□□□□ -1.37
PTPRK-220ENST00000531466 TKFCQ3LXA3 575 aa6.47□□□□□ -1.37
PTPRK-220ENST00000531466 AKNAD1Q5T1N1 836 aa6.47□□□□□ -1.37
PTPRK-220ENST00000531466 AFMIDQ63HM1 303 aa6.47□□□□□ -1.37
PTPRK-220ENST00000531466 RIN2Q8WYP3 895 aaPredicted RBP6.47□□□□□ -1.37
PTPRK-220ENST00000531466 NINJ1Q92982 152 aa6.47□□□□□ -1.37
PTPRK-220ENST00000531466 PTCD3Q96EY7 689 aaKnown RBP6.47□□□□□ -1.37
PTPRK-220ENST00000531466 DPP7Q9UHL4 492 aa6.47□□□□□ -1.37
PTPRK-220ENST00000531466 KCNE5Q9UJ90 142 aa6.47□□□□□ -1.37
PTPRK-220ENST00000531466 RAP2AP10114 183 aa6.46□□□□□ -1.38
PTPRK-220ENST00000531466 ZNF81P51508 661 aa6.46□□□□□ -1.38
PTPRK-220ENST00000531466 CCT2P78371 535 aaKnown RBP6.46□□□□□ -1.38
PTPRK-220ENST00000531466 UGT8Q16880 541 aa6.46□□□□□ -1.38
PTPRK-220ENST00000531466 Q6ZVL8 140 aa6.46□□□□□ -1.38
PTPRK-220ENST00000531466 RASSF3Q86WH2 238 aa6.46□□□□□ -1.38
PTPRK-220ENST00000531466 FAM43AQ8N2R8 423 aa6.46□□□□□ -1.38
PTPRK-220ENST00000531466 PPM1KQ8N3J5 372 aa6.46□□□□□ -1.38
PTPRK-220ENST00000531466 OR7D4Q8NG98 312 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms