RNA–Protein interactions for RNA: ENST00000531050.5

PTPRK-219, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 1 (best)

Gene PTPRK, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-219ENST00000531050 ZWINTO95229 277 aa8.27□□□□□ -1.09
PTPRK-219ENST00000531050 CLPTM1O96005 669 aa8.27□□□□□ -1.09
PTPRK-219ENST00000531050 SERPING1P05155 500 aa8.27□□□□□ -1.09
PTPRK-219ENST00000531050 CCNE1P24864 410 aa8.27□□□□□ -1.09
PTPRK-219ENST00000531050 HOXD10P28358 340 aa8.27□□□□□ -1.09
PTPRK-219ENST00000531050 MZF1P28698 734 aaPredicted RBP8.27□□□□□ -1.09
PTPRK-219ENST00000531050 COPB2P35606 906 aa8.27□□□□□ -1.09
PTPRK-219ENST00000531050 STT3AP46977 705 aa8.27□□□□□ -1.09
PTPRK-219ENST00000531050 EIF2B2P49770 351 aaKnown RBP8.27□□□□□ -1.09
PTPRK-219ENST00000531050 ENTPD1P49961 510 aa8.27□□□□□ -1.09
PTPRK-219ENST00000531050 PLCB3Q01970 1234 aa8.27□□□□□ -1.09
PTPRK-219ENST00000531050 CD300CQ08708 224 aa8.27□□□□□ -1.09
PTPRK-219ENST00000531050 TNIP1Q15025 636 aa8.27□□□□□ -1.09
PTPRK-219ENST00000531050 IL17AQ16552 155 aa8.27□□□□□ -1.09
PTPRK-219ENST00000531050 FXNQ16595 210 aa8.27□□□□□ -1.09
PTPRK-219ENST00000531050 SLC9C1Q4G0N8 1177 aa8.27□□□□□ -1.09
PTPRK-219ENST00000531050 HSP90AA5PQ58FG0 334 aa8.27□□□□□ -1.09
PTPRK-219ENST00000531050 KSR2Q6VAB6 950 aa8.27□□□□□ -1.09
PTPRK-219ENST00000531050 ARHGEF18Q6ZSZ5 1173 aa8.27□□□□□ -1.09
PTPRK-219ENST00000531050 RFX8Q6ZV50 586 aa8.27□□□□□ -1.09
PTPRK-219ENST00000531050 NLRP9Q7RTR0 991 aa8.27□□□□□ -1.09
PTPRK-219ENST00000531050 ARPINQ7Z6K5 226 aa8.27□□□□□ -1.09
PTPRK-219ENST00000531050 SCYL3Q8IZE3 742 aa8.27□□□□□ -1.09
PTPRK-219ENST00000531050 VPS52Q8N1B4 723 aa8.27□□□□□ -1.09
PTPRK-219ENST00000531050 IGDCC4Q8TDY8 1250 aa8.27□□□□□ -1.09
PTPRK-219ENST00000531050 MCUR1Q96AQ8 359 aa8.27□□□□□ -1.09
PTPRK-219ENST00000531050 SERPINB12Q96P63 405 aa8.27□□□□□ -1.09
PTPRK-219ENST00000531050 LY9Q9HBG7 655 aa8.27□□□□□ -1.09
PTPRK-219ENST00000531050 CYLDQ9NQC7 956 aa8.27□□□□□ -1.09
PTPRK-219ENST00000531050 DNAJB4Q9UDY4 337 aa8.27□□□□□ -1.09
PTPRK-219ENST00000531050 CLEC11AQ9Y240 323 aa8.27□□□□□ -1.09
PTPRK-219ENST00000531050 FAM187AA6NFU0 413 aa8.26□□□□□ -1.09
PTPRK-219ENST00000531050 TRIM64CA6NLI5 447 aa8.26□□□□□ -1.09
PTPRK-219ENST00000531050 ZNF213O14771 459 aa8.26□□□□□ -1.09
PTPRK-219ENST00000531050 ADCY6O43306 1168 aa8.26□□□□□ -1.09
PTPRK-219ENST00000531050 RHOBTB3O94955 611 aa8.26□□□□□ -1.09
PTPRK-219ENST00000531050 ADAMTS2O95450 1211 aa8.26□□□□□ -1.09
PTPRK-219ENST00000531050 PABPC1P11940 636 aaKnown RBP8.26□□□□□ -1.09
PTPRK-219ENST00000531050 RARGP13631 454 aa8.26□□□□□ -1.09
PTPRK-219ENST00000531050 GNA11P29992 359 aa8.26□□□□□ -1.09
PTPRK-219ENST00000531050 RCVRNP35243 200 aa8.26□□□□□ -1.09
PTPRK-219ENST00000531050 PRKCIP41743 596 aa8.26□□□□□ -1.09
PTPRK-219ENST00000531050 TUFMP49411 452 aaKnown RBP8.26□□□□□ -1.09
PTPRK-219ENST00000531050 RAP1GDS1P52306 607 aa8.26□□□□□ -1.09
PTPRK-219ENST00000531050 VCPP55072 806 aaKnown RBP8.26□□□□□ -1.09
PTPRK-219ENST00000531050 PTPN12Q05209 780 aaKnown RBP8.26□□□□□ -1.09
PTPRK-219ENST00000531050 RRP1BQ14684 758 aaKnown RBP8.26□□□□□ -1.09
PTPRK-219ENST00000531050 C16orf72Q14CZ0 275 aa8.26□□□□□ -1.09
PTPRK-219ENST00000531050 ZNF174Q15697 407 aa8.26□□□□□ -1.09
PTPRK-219ENST00000531050 SEPT7Q16181 437 aaKnown RBP8.26□□□□□ -1.09
PTPRK-219ENST00000531050 TMEM266Q2M3C6 531 aa8.26□□□□□ -1.09
PTPRK-219ENST00000531050 LMBRD2Q68DH5 695 aaPredicted RBP8.26□□□□□ -1.09
PTPRK-219ENST00000531050 FBXL19Q6PCT2 694 aa8.26□□□□□ -1.09
PTPRK-219ENST00000531050 BORAQ6PGQ7 559 aa8.26□□□□□ -1.09
PTPRK-219ENST00000531050 DCDC5Q6ZRR9 648 aa8.26□□□□□ -1.09
PTPRK-219ENST00000531050 JAMLQ86YT9 394 aa8.26□□□□□ -1.09
PTPRK-219ENST00000531050 LRRC49Q8IUZ0 686 aa8.26□□□□□ -1.09
PTPRK-219ENST00000531050 TBC1D10CQ8IV04 446 aa8.26□□□□□ -1.09
PTPRK-219ENST00000531050 TTC39CQ8N584 583 aa8.26□□□□□ -1.09
PTPRK-219ENST00000531050 LZTR1Q8N653 840 aa8.26□□□□□ -1.09
PTPRK-219ENST00000531050 ANKRD36BP1Q96IX9 119 aa8.26□□□□□ -1.09
PTPRK-219ENST00000531050 GRIP2Q9C0E4 1043 aa8.26□□□□□ -1.09
PTPRK-219ENST00000531050 LRRC27Q9C0I9 530 aa8.26□□□□□ -1.09
PTPRK-219ENST00000531050 CCDC68Q9H2F9 335 aa8.26□□□□□ -1.09
PTPRK-219ENST00000531050 TAS2R1Q9NYW7 299 aa8.26□□□□□ -1.09
PTPRK-219ENST00000531050 ARHGAP10A1A4S6 786 aa8.26□□□□□ -1.09
PTPRK-219ENST00000531050 CFAP69A5D8W1 941 aa8.26□□□□□ -1.09
PTPRK-219ENST00000531050 C2CD2LO14523 706 aa8.26□□□□□ -1.09
PTPRK-219ENST00000531050 EDF1O60869 148 aaKnown RBP8.26□□□□□ -1.09
PTPRK-219ENST00000531050 PHF2O75151 1096 aa8.26□□□□□ -1.09
PTPRK-219ENST00000531050 BAG2O95816 211 aa8.26□□□□□ -1.09
PTPRK-219ENST00000531050 FGGP02679 453 aa8.26□□□□□ -1.09
PTPRK-219ENST00000531050 KCNA2P16389 499 aa8.26□□□□□ -1.09
PTPRK-219ENST00000531050 PTPN2P17706 415 aa8.26□□□□□ -1.09
PTPRK-219ENST00000531050 HOXD13P35453 343 aa8.26□□□□□ -1.09
PTPRK-219ENST00000531050 RPL21P46778 160 aaKnown RBP8.26□□□□□ -1.09
PTPRK-219ENST00000531050 RPS3AP61247 264 aaKnown RBP8.26□□□□□ -1.09
PTPRK-219ENST00000531050 IL9RQ01113 521 aa8.26□□□□□ -1.09
PTPRK-219ENST00000531050 NONOQ15233 471 aaKnown RBP eCLIP8.26□□□□□ -1.09
PTPRK-219ENST00000531050 ANKRD20A4Q4UJ75 823 aa8.26□□□□□ -1.09
PTPRK-219ENST00000531050 SPOPLQ6IQ16 392 aa8.26□□□□□ -1.09
PTPRK-219ENST00000531050 ZNF410Q86VK4 478 aa8.26□□□□□ -1.09
PTPRK-219ENST00000531050 SGMS1Q86VZ5 419 aa8.26□□□□□ -1.09
PTPRK-219ENST00000531050 DDHD1Q8NEL9 900 aa8.26□□□□□ -1.09
PTPRK-219ENST00000531050 PIP4K2CQ8TBX8 421 aa8.26□□□□□ -1.09
PTPRK-219ENST00000531050 CYTH2Q99418 400 aa8.26□□□□□ -1.09
PTPRK-219ENST00000531050 TTC1Q99614 292 aa8.26□□□□□ -1.09
PTPRK-219ENST00000531050 PYM1Q9BRP8 204 aaKnown RBP8.26□□□□□ -1.09
PTPRK-219ENST00000531050 SLC39A3Q9BRY0 314 aa8.26□□□□□ -1.09
PTPRK-219ENST00000531050 EDEM3Q9BZQ6 932 aa8.26□□□□□ -1.09
PTPRK-219ENST00000531050 KLHL4Q9C0H6 718 aa8.26□□□□□ -1.09
PTPRK-219ENST00000531050 ERVK-5Q9HDB9 667 aa8.26□□□□□ -1.09
PTPRK-219ENST00000531050 TRNAU1APQ9NX07 287 aaKnown RBP8.26□□□□□ -1.09
PTPRK-219ENST00000531050 MKS1Q9NXB0 559 aa8.26□□□□□ -1.09
PTPRK-219ENST00000531050 NKIRAS1Q9NYS0 192 aa8.26□□□□□ -1.09
PTPRK-219ENST00000531050 CEP72Q9P209 647 aa8.26□□□□□ -1.09
PTPRK-219ENST00000531050 KANSL3Q9P2N6 904 aa8.26□□□□□ -1.09
PTPRK-219ENST00000531050 UVRAGQ9P2Y5 699 aa8.26□□□□□ -1.09
PTPRK-219ENST00000531050 ARMCX3Q9UH62 379 aaPredicted RBP8.26□□□□□ -1.09
PTPRK-219ENST00000531050 SSX2IPQ9Y2D8 614 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms