RNA–Protein interactions for RNA: ENST00000530036.1

RPUSD4-204, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 3

Gene RPUSD4, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-204ENST00000530036 CCDC94Q9BW85 323 aaPredicted RBP6.18□□□□□ -1.42
RPUSD4-204ENST00000530036 PLVAPQ9BX97 442 aa6.18□□□□□ -1.42
RPUSD4-204ENST00000530036 GBP3Q9H0R5 595 aa6.18□□□□□ -1.42
RPUSD4-204ENST00000530036 KCTD10Q9H3F6 313 aa6.18□□□□□ -1.42
RPUSD4-204ENST00000530036 CLSTN2Q9H4D0 955 aa6.18□□□□□ -1.42
RPUSD4-204ENST00000530036 NRDE2Q9H7Z3 1164 aa6.18□□□□□ -1.42
RPUSD4-204ENST00000530036 TOPORSQ9NS56 1045 aaPredicted RBP6.18□□□□□ -1.42
RPUSD4-204ENST00000530036 RMND1Q9NWS8 449 aa6.18□□□□□ -1.42
RPUSD4-204ENST00000530036 MIOSQ9NXC5 875 aa6.18□□□□□ -1.42
RPUSD4-204ENST00000530036 MTMR10Q9NXD2 777 aa6.18□□□□□ -1.42
RPUSD4-204ENST00000530036 KLK14Q9P0G3 267 aa6.18□□□□□ -1.42
RPUSD4-204ENST00000530036 CGNQ9P2M7 1197 aaKnown RBP6.18□□□□□ -1.42
RPUSD4-204ENST00000530036 KANSL3Q9P2N6 904 aa6.18□□□□□ -1.42
RPUSD4-204ENST00000530036 DNAJB4Q9UDY4 337 aa6.18□□□□□ -1.42
RPUSD4-204ENST00000530036 PARP2Q9UGN5 583 aa6.18□□□□□ -1.42
RPUSD4-204ENST00000530036 CPSF3Q9UKF6 684 aaKnown RBP6.18□□□□□ -1.42
RPUSD4-204ENST00000530036 AGO2Q9UKV8 859 aaKnown RBP6.18□□□□□ -1.42
RPUSD4-204ENST00000530036 MTUS1Q9ULD2 1270 aa6.18□□□□□ -1.42
RPUSD4-204ENST00000530036 INPP5FQ9Y2H2 1132 aa6.18□□□□□ -1.42
RPUSD4-204ENST00000530036 GDAQ9Y2T3 454 aa6.18□□□□□ -1.42
RPUSD4-204ENST00000530036 SMIM28A0A1B0GU29 152 aa6.17□□□□□ -1.42
RPUSD4-204ENST00000530036 PDXKO00764 312 aa6.17□□□□□ -1.42
RPUSD4-204ENST00000530036 ZC3H11AO75152 810 aaKnown RBP eCLIP6.17□□□□□ -1.42
RPUSD4-204ENST00000530036 DDHD2O94830 711 aa6.17□□□□□ -1.42
RPUSD4-204ENST00000530036 KIF20AO95235 890 aa6.17□□□□□ -1.42
RPUSD4-204ENST00000530036 EFEMP2O95967 443 aa6.17□□□□□ -1.42
RPUSD4-204ENST00000530036 LDHAP00338 332 aaKnown RBP6.17□□□□□ -1.42
RPUSD4-204ENST00000530036 POMCP01189 267 aa6.17□□□□□ -1.42
RPUSD4-204ENST00000530036 ITGB1P05556 798 aa6.17□□□□□ -1.42
RPUSD4-204ENST00000530036 THP07101 528 aa6.17□□□□□ -1.42
RPUSD4-204ENST00000530036 GALTP07902 379 aa6.17□□□□□ -1.42
RPUSD4-204ENST00000530036 POU3F3P20264 500 aaPredicted RBP6.17□□□□□ -1.42
RPUSD4-204ENST00000530036 PPM1AP35813 382 aa6.17□□□□□ -1.42
RPUSD4-204ENST00000530036 PBX3P40426 434 aa6.17□□□□□ -1.42
RPUSD4-204ENST00000530036 MATR3P43243 847 aaKnown RBP eCLIP6.17□□□□□ -1.42
RPUSD4-204ENST00000530036 SLC11A1P49279 550 aa6.17□□□□□ -1.42
RPUSD4-204ENST00000530036 YARSP54577 528 aaKnown RBP6.17□□□□□ -1.42
RPUSD4-204ENST00000530036 BCAR1P56945 870 aa6.17□□□□□ -1.42
RPUSD4-204ENST00000530036 OSTNP61366 133 aa6.17□□□□□ -1.42
RPUSD4-204ENST00000530036 PLCB3Q01970 1234 aa6.17□□□□□ -1.42
RPUSD4-204ENST00000530036 RNASELQ05823 741 aaKnown RBP6.17□□□□□ -1.42
RPUSD4-204ENST00000530036 SOX4Q06945 474 aaPredicted RBP6.17□□□□□ -1.42
RPUSD4-204ENST00000530036 TUSC3Q13454 348 aa6.17□□□□□ -1.42
RPUSD4-204ENST00000530036 NFIL3Q16649 462 aa6.17□□□□□ -1.42
RPUSD4-204ENST00000530036 KNOP1Q1ED39 458 aaKnown RBP6.17□□□□□ -1.42
RPUSD4-204ENST00000530036 SLC10A6Q3KNW5 377 aa6.17□□□□□ -1.42
RPUSD4-204ENST00000530036 GLRA4Q5JXX5 417 aa6.17□□□□□ -1.42
RPUSD4-204ENST00000530036 ZNF658Q5TYW1 1059 aaPredicted RBP6.17□□□□□ -1.42
RPUSD4-204ENST00000530036 ARMCX5Q6P1M9 558 aa6.17□□□□□ -1.42
RPUSD4-204ENST00000530036 KCNT2Q6UVM3 1135 aa6.17□□□□□ -1.42
RPUSD4-204ENST00000530036 RBM43Q6ZSC3 357 aaKnown RBP6.17□□□□□ -1.42
RPUSD4-204ENST00000530036 TMEM173Q86WV6 379 aaPredicted RBP6.17□□□□□ -1.42
RPUSD4-204ENST00000530036 BRSK2Q8IWQ3 736 aa6.17□□□□□ -1.42
RPUSD4-204ENST00000530036 NELFCDQ8IXH7 590 aa6.17□□□□□ -1.42
RPUSD4-204ENST00000530036 COLGALT2Q8IYK4 626 aa6.17□□□□□ -1.42
RPUSD4-204ENST00000530036 SLC39A11Q8N1S5 342 aa6.17□□□□□ -1.42
RPUSD4-204ENST00000530036 ZSWIM2Q8NEG5 633 aa6.17□□□□□ -1.42
RPUSD4-204ENST00000530036 GOLGA5Q8TBA6 731 aa6.17□□□□□ -1.42
RPUSD4-204ENST00000530036 GDPD5Q8WTR4 605 aa6.17□□□□□ -1.42
RPUSD4-204ENST00000530036 ARNTL2Q8WYA1 636 aa6.17□□□□□ -1.42
RPUSD4-204ENST00000530036 POMGNT1Q8WZA1 660 aa6.17□□□□□ -1.42
RPUSD4-204ENST00000530036 ZMAT2Q96NC0 199 aaKnown RBP6.17□□□□□ -1.42
RPUSD4-204ENST00000530036 ZNF558Q96NG5 402 aa6.17□□□□□ -1.42
RPUSD4-204ENST00000530036 RPS6KC1Q96S38 1066 aa6.17□□□□□ -1.42
RPUSD4-204ENST00000530036 TMEM175Q9BSA9 504 aa6.17□□□□□ -1.42
RPUSD4-204ENST00000530036 GTPBP4Q9BZE4 634 aaKnown RBP6.17□□□□□ -1.42
RPUSD4-204ENST00000530036 PRDM12Q9H4Q4 367 aa6.17□□□□□ -1.42
RPUSD4-204ENST00000530036 CERS4Q9HA82 394 aa6.17□□□□□ -1.42
RPUSD4-204ENST00000530036 PLEKHA5Q9HAU0 1116 aa6.17□□□□□ -1.42
RPUSD4-204ENST00000530036 AAASQ9NRG9 546 aa6.17□□□□□ -1.42
RPUSD4-204ENST00000530036 AGPAT3Q9NRZ7 376 aa6.17□□□□□ -1.42
RPUSD4-204ENST00000530036 MARCH5Q9NX47 278 aa6.17□□□□□ -1.42
RPUSD4-204ENST00000530036 HSPBP1Q9NZL4 362 aa6.17□□□□□ -1.42
RPUSD4-204ENST00000530036 MAN1B1Q9UKM7 699 aa6.17□□□□□ -1.42
RPUSD4-204ENST00000530036 TRAF3IP3Q9Y228 551 aa6.17□□□□□ -1.42
RPUSD4-204ENST00000530036 PCDHB12Q9Y5F1 795 aa6.17□□□□□ -1.42
RPUSD4-204ENST00000530036 XIRP2A4UGR9 3374 aa6.17□□□□□ -1.42
RPUSD4-204ENST00000530036 UNC80Q8N2C7 3258 aa6.17□□□□□ -1.42
RPUSD4-204ENST00000530036 SPTBN5Q9NRC6 3674 aaKnown RBP6.16□□□□□ -1.42
RPUSD4-204ENST00000530036 PLXNA3P51805 1871 aa6.16□□□□□ -1.42
RPUSD4-204ENST00000530036 TMEM189-UBE2V1I3L0A0 370 aa6.16□□□□□ -1.42
RPUSD4-204ENST00000530036 RFXAPO00287 272 aa6.16□□□□□ -1.42
RPUSD4-204ENST00000530036 NRP1O14786 923 aa6.16□□□□□ -1.42
RPUSD4-204ENST00000530036 EXTL3O43909 919 aa6.16□□□□□ -1.42
RPUSD4-204ENST00000530036 FGF18O76093 207 aa6.16□□□□□ -1.42
RPUSD4-204ENST00000530036 IL18RAPO95256 599 aa6.16□□□□□ -1.42
RPUSD4-204ENST00000530036 MBD3O95983 291 aa6.16□□□□□ -1.42
RPUSD4-204ENST00000530036 BMP6P22004 513 aa6.16□□□□□ -1.42
RPUSD4-204ENST00000530036 MCM4P33991 863 aa6.16□□□□□ -1.42
RPUSD4-204ENST00000530036 PRCPP42785 496 aa6.16□□□□□ -1.42
RPUSD4-204ENST00000530036 ALDH7A1P49419 539 aaKnown RBP6.16□□□□□ -1.42
RPUSD4-204ENST00000530036 ACOT2P49753 483 aa6.16□□□□□ -1.42
RPUSD4-204ENST00000530036 WNT7BP56706 349 aa6.16□□□□□ -1.42
RPUSD4-204ENST00000530036 UBE3AQ05086 875 aa6.16□□□□□ -1.42
RPUSD4-204ENST00000530036 PPP2R3AQ06190 1150 aa6.16□□□□□ -1.42
RPUSD4-204ENST00000530036 GPM6BQ13491 265 aa6.16□□□□□ -1.42
RPUSD4-204ENST00000530036 CAMK1Q14012 370 aa6.16□□□□□ -1.42
RPUSD4-204ENST00000530036 MORC3Q14149 939 aa6.16□□□□□ -1.42
RPUSD4-204ENST00000530036 ADGRE1Q14246 886 aa6.16□□□□□ -1.42
RPUSD4-204ENST00000530036 MYBPC2Q14324 1141 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms