RNA–Protein interactions for RNA: ENST00000528999.5

PUF60-213, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 3

Gene PUF60, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-213ENST00000528999 UNGP13051 313 aaPredicted RBP11.48□□□□□ -0.57
PUF60-213ENST00000528999 OSBPP22059 807 aa11.48□□□□□ -0.57
PUF60-213ENST00000528999 CTNNA1P35221 906 aaKnown RBP11.48□□□□□ -0.57
PUF60-213ENST00000528999 NF2P35240 595 aa11.48□□□□□ -0.57
PUF60-213ENST00000528999 DNA2P51530 1060 aa11.48□□□□□ -0.57
PUF60-213ENST00000528999 RNASE9P60153 205 aaKnown RBP11.48□□□□□ -0.57
PUF60-213ENST00000528999 ERVK-9P63128 1117 aa11.48□□□□□ -0.57
PUF60-213ENST00000528999 IRX3P78415 501 aaPredicted RBP11.48□□□□□ -0.57
PUF60-213ENST00000528999 PTP4A2Q12974 167 aa11.48□□□□□ -0.57
PUF60-213ENST00000528999 R3HDM1Q15032 1099 aaKnown RBP11.48□□□□□ -0.57
PUF60-213ENST00000528999 CYP1B1Q16678 543 aa11.48□□□□□ -0.57
PUF60-213ENST00000528999 RUFY4Q6ZNE9 571 aa11.48□□□□□ -0.57
PUF60-213ENST00000528999 SLC47A2Q86VL8 602 aa11.48□□□□□ -0.57
PUF60-213ENST00000528999 GSPT2Q8IYD1 628 aaKnown RBP11.48□□□□□ -0.57
PUF60-213ENST00000528999 ANKRD13AQ8IZ07 590 aa11.48□□□□□ -0.57
PUF60-213ENST00000528999 ZNF516Q92618 1163 aa11.48□□□□□ -0.57
PUF60-213ENST00000528999 CGRRF1Q99675 332 aa11.48□□□□□ -0.57
PUF60-213ENST00000528999 ERP44Q9BS26 406 aa11.48□□□□□ -0.57
PUF60-213ENST00000528999 KIFC3Q9BVG8 833 aa11.48□□□□□ -0.57
PUF60-213ENST00000528999 AP1M1Q9BXS5 423 aa11.48□□□□□ -0.57
PUF60-213ENST00000528999 MROH8Q9H579 483 aa11.48□□□□□ -0.57
PUF60-213ENST00000528999 AZI2Q9H6S1 392 aa11.48□□□□□ -0.57
PUF60-213ENST00000528999 HOMER3Q9NSC5 361 aa11.48□□□□□ -0.57
PUF60-213ENST00000528999 BTBD7Q9P203 1132 aa11.48□□□□□ -0.57
PUF60-213ENST00000528999 TRPC6Q9Y210 931 aa11.48□□□□□ -0.57
PUF60-213ENST00000528999 ADGRA3Q8IWK6 1321 aa11.48□□□□□ -0.57
PUF60-213ENST00000528999 LOC285556D6RIA3 1793 aa11.48□□□□□ -0.57
PUF60-213ENST00000528999 ADGRA2Q96PE1 1338 aa11.47□□□□□ -0.57
PUF60-213ENST00000528999 IGKV6-21A0A0C4DH24 114 aa11.47□□□□□ -0.57
PUF60-213ENST00000528999 SPDYE5A6NIY4 337 aa11.47□□□□□ -0.57
PUF60-213ENST00000528999 PHF2O75151 1096 aa11.47□□□□□ -0.57
PUF60-213ENST00000528999 MMEP08473 750 aa11.47□□□□□ -0.57
PUF60-213ENST00000528999 DLATP10515 647 aaKnown RBP11.47□□□□□ -0.57
PUF60-213ENST00000528999 TNNI1P19237 187 aa11.47□□□□□ -0.57
PUF60-213ENST00000528999 COMTP21964 271 aa11.47□□□□□ -0.57
PUF60-213ENST00000528999 UBA1P22314 1058 aaKnown RBP11.47□□□□□ -0.57
PUF60-213ENST00000528999 MAN1A1P33908 653 aa11.47□□□□□ -0.57
PUF60-213ENST00000528999 EIF3BP55884 814 aaKnown RBP11.47□□□□□ -0.57
PUF60-213ENST00000528999 RWDD2BP57060 319 aa11.47□□□□□ -0.57
PUF60-213ENST00000528999 DR1Q01658 176 aa11.47□□□□□ -0.57
PUF60-213ENST00000528999 POU5F1BQ06416 359 aa11.47□□□□□ -0.57
PUF60-213ENST00000528999 PPIL2Q13356 520 aa11.47□□□□□ -0.57
PUF60-213ENST00000528999 BIRC3Q13489 604 aa11.47□□□□□ -0.57
PUF60-213ENST00000528999 ZSCAN26Q16670 478 aa11.47□□□□□ -0.57
PUF60-213ENST00000528999 SEL1L2Q5TEA6 688 aa11.47□□□□□ -0.57
PUF60-213ENST00000528999 DUPD1Q68J44 220 aa11.47□□□□□ -0.57
PUF60-213ENST00000528999 CRELD2Q6UXH1 353 aaPredicted RBP11.47□□□□□ -0.57
PUF60-213ENST00000528999 SEPT14Q6ZU15 432 aa11.47□□□□□ -0.57
PUF60-213ENST00000528999 SYDE1Q6ZW31 735 aaPredicted RBP11.47□□□□□ -0.57
PUF60-213ENST00000528999 PALB2Q86YC2 1186 aa11.47□□□□□ -0.57
PUF60-213ENST00000528999 ARFGAP2Q8N6H7 521 aa11.47□□□□□ -0.57
PUF60-213ENST00000528999 TSEN2Q8NCE0 465 aaKnown RBP11.47□□□□□ -0.57
PUF60-213ENST00000528999 SHCBP1Q8NEM2 672 aa11.47□□□□□ -0.57
PUF60-213ENST00000528999 ZNF564Q8TBZ8 553 aaPredicted RBP11.47□□□□□ -0.57
PUF60-213ENST00000528999 KAT5Q92993 513 aa11.47□□□□□ -0.57
PUF60-213ENST00000528999 TATDN2Q93075 761 aa11.47□□□□□ -0.57
PUF60-213ENST00000528999 ZIM3Q96PE6 472 aa11.47□□□□□ -0.57
PUF60-213ENST00000528999 POP1Q99575 1024 aaKnown RBP11.47□□□□□ -0.57
PUF60-213ENST00000528999 MSTO1Q9BUK6 570 aa11.47□□□□□ -0.57
PUF60-213ENST00000528999 NUP85Q9BW27 656 aa11.47□□□□□ -0.57
PUF60-213ENST00000528999 MRPL4Q9BYD3 311 aaKnown RBP11.47□□□□□ -0.57
PUF60-213ENST00000528999 DDX47Q9H0S4 455 aaKnown RBP11.47□□□□□ -0.57
PUF60-213ENST00000528999 MRPL47Q9HD33 250 aaKnown RBP11.47□□□□□ -0.57
PUF60-213ENST00000528999 FEZ2Q9UHY8 353 aaPredicted RBP11.47□□□□□ -0.57
PUF60-213ENST00000528999 AGTPBP1Q9UPW5 1226 aa11.47□□□□□ -0.57
PUF60-213ENST00000528999 COL11A1P12107 1806 aaPredicted RBP11.46□□□□□ -0.57
PUF60-213ENST00000528999 DNAJC25-GNG10A0A024R161 153 aa11.46□□□□□ -0.57
PUF60-213ENST00000528999 GOLGA6L10A6NI86 522 aa11.46□□□□□ -0.57
PUF60-213ENST00000528999 LRRIQ4A6NIV6 560 aa11.46□□□□□ -0.57
PUF60-213ENST00000528999 SOCS7O14512 581 aa11.46□□□□□ -0.57
PUF60-213ENST00000528999 PHACTR2O75167 634 aa11.46□□□□□ -0.57
PUF60-213ENST00000528999 TOM1L1O75674 476 aa11.46□□□□□ -0.57
PUF60-213ENST00000528999 HLA-DRAP01903 254 aa11.46□□□□□ -0.57
PUF60-213ENST00000528999 CYP1A1P04798 512 aaPredicted RBP11.46□□□□□ -0.57
PUF60-213ENST00000528999 FAM153BP0C7A2 387 aa11.46□□□□□ -0.57
PUF60-213ENST00000528999 ECHS1P30084 290 aa11.46□□□□□ -0.57
PUF60-213ENST00000528999 FNTAP49354 379 aa11.46□□□□□ -0.57
PUF60-213ENST00000528999 GYS2P54840 703 aa11.46□□□□□ -0.57
PUF60-213ENST00000528999 CNTN2Q02246 1040 aa11.46□□□□□ -0.57
PUF60-213ENST00000528999 CENPCQ03188 943 aa11.46□□□□□ -0.57
PUF60-213ENST00000528999 HLTFQ14527 1009 aaKnown RBP eCLIP11.46□□□□□ -0.57
PUF60-213ENST00000528999 MESDQ14696 234 aa11.46□□□□□ -0.57
PUF60-213ENST00000528999 FAM153CQ494X1 144 aa11.46□□□□□ -0.57
PUF60-213ENST00000528999 CELF3Q5SZQ8 465 aaKnown RBP11.46□□□□□ -0.57
PUF60-213ENST00000528999 TREML2Q5T2D2 321 aa11.46□□□□□ -0.57
PUF60-213ENST00000528999 LIN9Q5TKA1 542 aa11.46□□□□□ -0.57
PUF60-213ENST00000528999 DCAF12L1Q5VU92 463 aa11.46□□□□□ -0.57
PUF60-213ENST00000528999 CDCA2Q69YH5 1023 aaPredicted RBP11.46□□□□□ -0.57
PUF60-213ENST00000528999 USP50Q70EL3 339 aaPredicted RBP11.46□□□□□ -0.57
PUF60-213ENST00000528999 NCAPG2Q86XI2 1143 aa11.46□□□□□ -0.57
PUF60-213ENST00000528999 WDR49Q8IV35 697 aa11.46□□□□□ -0.57
PUF60-213ENST00000528999 ZBTB8OSQ8IWT0 167 aa11.46□□□□□ -0.57
PUF60-213ENST00000528999 MCOLN2Q8IZK6 566 aa11.46□□□□□ -0.57
PUF60-213ENST00000528999 C12orf50Q8NA57 414 aaPredicted RBP11.46□□□□□ -0.57
PUF60-213ENST00000528999 ASAP3Q8TDY4 903 aa11.46□□□□□ -0.57
PUF60-213ENST00000528999 PIK3R5Q8WYR1 880 aa11.46□□□□□ -0.57
PUF60-213ENST00000528999 SLCO2A1Q92959 643 aa11.46□□□□□ -0.57
PUF60-213ENST00000528999 TMEM143Q96AN5 459 aa11.46□□□□□ -0.57
PUF60-213ENST00000528999 ZNF653Q96CK0 615 aa11.46□□□□□ -0.57
PUF60-213ENST00000528999 GDAP1L1Q96MZ0 367 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms