RNA–Protein interactions for RNA: ENST00000528149.5

CCDC90B-210, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-210ENST00000528149 ZC2HC1CQ53FD0 456 aaPredicted RBP12.67□□□□□ -0.38
CCDC90B-210ENST00000528149 LRRC55Q6ZSA7 311 aa12.67□□□□□ -0.38
CCDC90B-210ENST00000528149 HAUS6Q7Z4H7 955 aa12.67□□□□□ -0.38
CCDC90B-210ENST00000528149 ECHDC2Q86YB7 292 aa12.67□□□□□ -0.38
CCDC90B-210ENST00000528149 FIBCD1Q8N539 461 aa12.67□□□□□ -0.38
CCDC90B-210ENST00000528149 SMARCE1Q969G3 411 aa12.67□□□□□ -0.38
CCDC90B-210ENST00000528149 IKZF4Q9H2S9 585 aa12.67□□□□□ -0.38
CCDC90B-210ENST00000528149 OLFML3Q9NRN5 406 aa12.67□□□□□ -0.38
CCDC90B-210ENST00000528149 HOOK1Q9UJC3 728 aaKnown RBP12.67□□□□□ -0.38
CCDC90B-210ENST00000528149 HES2Q9Y543 173 aa12.67□□□□□ -0.38
CCDC90B-210ENST00000528149 PCDHA5Q9Y5H7 936 aa12.67□□□□□ -0.38
CCDC90B-210ENST00000528149 SQORQ9Y6N5 450 aa12.67□□□□□ -0.38
CCDC90B-210ENST00000528149 FRYLO94915 3013 aa12.67□□□□□ -0.38
CCDC90B-210ENST00000528149 TBKBP1A7MCY6 615 aa12.66□□□□□ -0.38
CCDC90B-210ENST00000528149 BIN1O00499 593 aa12.66□□□□□ -0.38
CCDC90B-210ENST00000528149 GPR182O15218 404 aa12.66□□□□□ -0.38
CCDC90B-210ENST00000528149 PPP1R37O75864 691 aa12.66□□□□□ -0.38
CCDC90B-210ENST00000528149 SMC2O95347 1197 aa12.66□□□□□ -0.38
CCDC90B-210ENST00000528149 SARSP49591 514 aaKnown RBP12.66□□□□□ -0.38
CCDC90B-210ENST00000528149 EFNA5P52803 228 aa12.66□□□□□ -0.38
CCDC90B-210ENST00000528149 NFKBIBQ15653 356 aa12.66□□□□□ -0.38
CCDC90B-210ENST00000528149 MAPK6Q16659 721 aa12.66□□□□□ -0.38
CCDC90B-210ENST00000528149 EEF1DP3Q658K8 133 aa12.66□□□□□ -0.38
CCDC90B-210ENST00000528149 ZNF598Q86UK7 904 aaKnown RBP12.66□□□□□ -0.38
CCDC90B-210ENST00000528149 NPAS4Q8IUM7 802 aa12.66□□□□□ -0.38
CCDC90B-210ENST00000528149 EFHBQ8N7U6 833 aa12.66□□□□□ -0.38
CCDC90B-210ENST00000528149 KIAA0895Q8NCT3 520 aa12.66□□□□□ -0.38
CCDC90B-210ENST00000528149 HELQQ8TDG4 1101 aa12.66□□□□□ -0.38
CCDC90B-210ENST00000528149 SLC39A2Q9NP94 309 aa12.66□□□□□ -0.38
CCDC90B-210ENST00000528149 AGPAT5Q9NUQ2 364 aa12.66□□□□□ -0.38
CCDC90B-210ENST00000528149 CACNG4Q9UBN1 327 aa12.66□□□□□ -0.38
CCDC90B-210ENST00000528149 MAN1B1Q9UKM7 699 aa12.66□□□□□ -0.38
CCDC90B-210ENST00000528149 GDAQ9Y2T3 454 aa12.66□□□□□ -0.38
CCDC90B-210ENST00000528149 USP24Q9UPU5 2620 aa12.66□□□□□ -0.38
CCDC90B-210ENST00000528149 CNTNAP2Q9UHC6 1331 aa12.65□□□□□ -0.38
CCDC90B-210ENST00000528149 PKD1L2Q7Z442 2459 aa12.65□□□□□ -0.38
CCDC90B-210ENST00000528149 OTOGLQ3ZCN5 2332 aa12.65□□□□□ -0.38
CCDC90B-210ENST00000528149 H0YCG3 227 aa12.65□□□□□ -0.38
CCDC90B-210ENST00000528149 K7ERI5 159 aa12.65□□□□□ -0.38
CCDC90B-210ENST00000528149 PRPF6O94906 941 aaKnown RBP12.65□□□□□ -0.38
CCDC90B-210ENST00000528149 RHOBTB3O94955 611 aa12.65□□□□□ -0.38
CCDC90B-210ENST00000528149 ARF4P18085 180 aaPredicted RBP12.65□□□□□ -0.38
CCDC90B-210ENST00000528149 PTMSP20962 102 aa12.65□□□□□ -0.38
CCDC90B-210ENST00000528149 DNAJB1P25685 340 aa12.65□□□□□ -0.38
CCDC90B-210ENST00000528149 FAM189BP81408 668 aa12.65□□□□□ -0.38
CCDC90B-210ENST00000528149 KCNA1Q09470 495 aa12.65□□□□□ -0.38
CCDC90B-210ENST00000528149 TMEM132AQ24JP5 1023 aa12.65□□□□□ -0.38
CCDC90B-210ENST00000528149 NT5DC1Q5TFE4 455 aa12.65□□□□□ -0.38
CCDC90B-210ENST00000528149 ISM2Q6H9L7 571 aa12.65□□□□□ -0.38
CCDC90B-210ENST00000528149 CAVIN1Q6NZI2 390 aaKnown RBP12.65□□□□□ -0.38
CCDC90B-210ENST00000528149 ZNF720Q7Z2F6 126 aa12.65□□□□□ -0.38
CCDC90B-210ENST00000528149 ZBTB33Q86T24 672 aa12.65□□□□□ -0.38
CCDC90B-210ENST00000528149 ELOA2Q8IYF1 753 aaPredicted RBP12.65□□□□□ -0.38
CCDC90B-210ENST00000528149 SMYD4Q8IYR2 804 aaPredicted RBP12.65□□□□□ -0.38
CCDC90B-210ENST00000528149 SMG8Q8ND04 991 aaKnown RBP12.65□□□□□ -0.38
CCDC90B-210ENST00000528149 CCDC47Q96A33 483 aaKnown RBP12.65□□□□□ -0.38
CCDC90B-210ENST00000528149 NTPCRQ9BSD7 190 aaKnown RBP12.65□□□□□ -0.38
CCDC90B-210ENST00000528149 FZD8Q9H461 694 aa12.65□□□□□ -0.38
CCDC90B-210ENST00000528149 NXF3Q9H4D5 531 aaKnown RBP12.65□□□□□ -0.38
CCDC90B-210ENST00000528149 TMEM134Q9H6X4 195 aa12.65□□□□□ -0.38
CCDC90B-210ENST00000528149 PRMT7Q9NVM4 692 aaPredicted RBP12.65□□□□□ -0.38
CCDC90B-210ENST00000528149 TMEM63CQ9P1W3 806 aa12.65□□□□□ -0.38
CCDC90B-210ENST00000528149 TBX20Q9UMR3 447 aa12.65□□□□□ -0.38
CCDC90B-210ENST00000528149 ZMYM2Q9UBW7 1377 aa12.65□□□□□ -0.38
CCDC90B-210ENST00000528149 F8W810 466 aa12.64□□□□□ -0.39
CCDC90B-210ENST00000528149 NRIP1P48552 1158 aa12.64□□□□□ -0.39
CCDC90B-210ENST00000528149 GTF2BQ00403 316 aa12.64□□□□□ -0.39
CCDC90B-210ENST00000528149 STRN3Q13033 797 aa12.64□□□□□ -0.39
CCDC90B-210ENST00000528149 STK4Q13043 487 aa12.64□□□□□ -0.39
CCDC90B-210ENST00000528149 PRPF4BQ13523 1007 aaKnown RBP12.64□□□□□ -0.39
CCDC90B-210ENST00000528149 BTG3Q14201 252 aaPredicted RBP12.64□□□□□ -0.39
CCDC90B-210ENST00000528149 KCNB1Q14721 858 aa12.64□□□□□ -0.39
CCDC90B-210ENST00000528149 FAM187BQ17R55 369 aa12.64□□□□□ -0.39
CCDC90B-210ENST00000528149 CCDC183Q5T5S1 534 aa12.64□□□□□ -0.39
CCDC90B-210ENST00000528149 L1TD1Q5T7N2 865 aaKnown RBP12.64□□□□□ -0.39
CCDC90B-210ENST00000528149 TWF2Q6IBS0 349 aaKnown RBP12.64□□□□□ -0.39
CCDC90B-210ENST00000528149 SLC24A5Q71RS6 500 aa12.64□□□□□ -0.39
CCDC90B-210ENST00000528149 TMEM173Q86WV6 379 aaPredicted RBP12.64□□□□□ -0.39
CCDC90B-210ENST00000528149 MAP4K3Q8IVH8 894 aa12.64□□□□□ -0.39
CCDC90B-210ENST00000528149 NELFCDQ8IXH7 590 aa12.64□□□□□ -0.39
CCDC90B-210ENST00000528149 SPATA20Q8TB22 786 aa12.64□□□□□ -0.39
CCDC90B-210ENST00000528149 BCL7CQ8WUZ0 217 aaPredicted RBP12.64□□□□□ -0.39
CCDC90B-210ENST00000528149 SUSD6Q92537 303 aa12.64□□□□□ -0.39
CCDC90B-210ENST00000528149 CLP1Q92989 425 aaKnown RBP12.64□□□□□ -0.39
CCDC90B-210ENST00000528149 PPP2R3CQ969Q6 453 aa12.64□□□□□ -0.39
CCDC90B-210ENST00000528149 HVCN1Q96D96 273 aa12.64□□□□□ -0.39
CCDC90B-210ENST00000528149 BICD1Q96G01 975 aa12.64□□□□□ -0.39
CCDC90B-210ENST00000528149 CASD1Q96PB1 797 aa12.64□□□□□ -0.39
CCDC90B-210ENST00000528149 TARS2Q9BW92 718 aaKnown RBP12.64□□□□□ -0.39
CCDC90B-210ENST00000528149 APOL6Q9BWW8 343 aa12.64□□□□□ -0.39
CCDC90B-210ENST00000528149 STRA6Q9BX79 667 aa12.64□□□□□ -0.39
CCDC90B-210ENST00000528149 FTHL17Q9BXU8 183 aa12.64□□□□□ -0.39
CCDC90B-210ENST00000528149 MRPL4Q9BYD3 311 aaKnown RBP12.64□□□□□ -0.39
CCDC90B-210ENST00000528149 ST6GALNAC4Q9H4F1 302 aa12.64□□□□□ -0.39
CCDC90B-210ENST00000528149 CWH43Q9H720 699 aa12.64□□□□□ -0.39
CCDC90B-210ENST00000528149 INPP5FQ9Y2H2 1132 aa12.64□□□□□ -0.39
CCDC90B-210ENST00000528149 RWDD3Q9Y3V2 267 aa12.64□□□□□ -0.39
CCDC90B-210ENST00000528149 TISP43B9A030 160 aa12.63□□□□□ -0.39
CCDC90B-210ENST00000528149 ACKR2O00590 384 aa12.63□□□□□ -0.39
CCDC90B-210ENST00000528149 HNRNPDLO14979 420 aaKnown RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms