RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 CLRN1P58418 232 aa4.07□□□□□ -1.76
ECHDC1-219ENST00000526299 KRTAP10-6P60371 365 aaPredicted RBP4.07□□□□□ -1.76
ECHDC1-219ENST00000526299 OCA2Q04671 838 aa4.07□□□□□ -1.76
ECHDC1-219ENST00000526299 TRIM25Q14258 630 aaKnown RBP4.07□□□□□ -1.76
ECHDC1-219ENST00000526299 AKNAD1Q5T1N1 836 aa4.07□□□□□ -1.76
ECHDC1-219ENST00000526299 MED25Q71SY5 747 aa4.07□□□□□ -1.76
ECHDC1-219ENST00000526299 LYSMD2Q8IV50 215 aa4.07□□□□□ -1.76
ECHDC1-219ENST00000526299 ZNF610Q8N9Z0 462 aa4.07□□□□□ -1.76
ECHDC1-219ENST00000526299 RSAD2Q8WXG1 361 aa4.07□□□□□ -1.76
ECHDC1-219ENST00000526299 AIFM2Q9BRQ8 373 aa4.07□□□□□ -1.76
ECHDC1-219ENST00000526299 PRDM12Q9H4Q4 367 aa4.07□□□□□ -1.76
ECHDC1-219ENST00000526299 KANSL2Q9H9L4 492 aa4.07□□□□□ -1.76
ECHDC1-219ENST00000526299 CDK11AQ9UQ88 783 aaPredicted RBP4.07□□□□□ -1.76
ECHDC1-219ENST00000526299 PPP2R3BQ9Y5P8 575 aa4.07□□□□□ -1.76
ECHDC1-219ENST00000526299 A0A1B0GTW7 788 aa4.06□□□□□ -1.76
ECHDC1-219ENST00000526299 ADCY6O43306 1168 aa4.06□□□□□ -1.76
ECHDC1-219ENST00000526299 RAB11FIP3O75154 756 aa4.06□□□□□ -1.76
ECHDC1-219ENST00000526299 CTSSP25774 331 aa4.06□□□□□ -1.76
ECHDC1-219ENST00000526299 FLT3LGP49771 235 aa4.06□□□□□ -1.76
ECHDC1-219ENST00000526299 CXADRP78310 365 aa4.06□□□□□ -1.76
ECHDC1-219ENST00000526299 SART3Q15020 963 aaKnown RBP4.06□□□□□ -1.76
ECHDC1-219ENST00000526299 FAM47AQ5JRC9 791 aa4.06□□□□□ -1.76
ECHDC1-219ENST00000526299 GPR158Q5T848 1215 aa4.06□□□□□ -1.76
ECHDC1-219ENST00000526299 CNNM4Q6P4Q7 775 aa4.06□□□□□ -1.76
ECHDC1-219ENST00000526299 FRMD7Q6ZUT3 714 aa4.06□□□□□ -1.76
ECHDC1-219ENST00000526299 SLC41A1Q8IVJ1 513 aa4.06□□□□□ -1.76
ECHDC1-219ENST00000526299 REPS2Q8NFH8 660 aa4.06□□□□□ -1.76
ECHDC1-219ENST00000526299 OR14C36Q8NHC7 312 aa4.06□□□□□ -1.76
ECHDC1-219ENST00000526299 TMEM74BQ9NUR3 256 aa4.06□□□□□ -1.76
ECHDC1-219ENST00000526299 SPTLC3Q9NUV7 552 aa4.06□□□□□ -1.76
ECHDC1-219ENST00000526299 PNPLA7Q6ZV29 1317 aa4.05□□□□□ -1.76
ECHDC1-219ENST00000526299 CXorf49A8MYA2 514 aaPredicted RBP4.05□□□□□ -1.76
ECHDC1-219ENST00000526299 PJA2O43164 708 aa4.05□□□□□ -1.76
ECHDC1-219ENST00000526299 LPLP06858 475 aa4.05□□□□□ -1.76
ECHDC1-219ENST00000526299 FGFR4P22455 802 aa4.05□□□□□ -1.76
ECHDC1-219ENST00000526299 SCNN1BP51168 640 aa4.05□□□□□ -1.76
ECHDC1-219ENST00000526299 MANFP55145 182 aaKnown RBP4.05□□□□□ -1.76
ECHDC1-219ENST00000526299 LGALS4P56470 323 aa4.05□□□□□ -1.76
ECHDC1-219ENST00000526299 RAP2BP61225 183 aa4.05□□□□□ -1.76
ECHDC1-219ENST00000526299 MEF2AQ02078 507 aaPredicted RBP4.05□□□□□ -1.76
ECHDC1-219ENST00000526299 PCBP1Q15365 356 aaKnown RBP eCLIP4.05□□□□□ -1.76
ECHDC1-219ENST00000526299 TERF2Q15554 542 aa4.05□□□□□ -1.76
ECHDC1-219ENST00000526299 CT83Q5H943 113 aa4.05□□□□□ -1.76
ECHDC1-219ENST00000526299 SH3TC2Q8TF17 1288 aa4.05□□□□□ -1.76
ECHDC1-219ENST00000526299 NACC2Q96BF6 587 aa4.05□□□□□ -1.76
ECHDC1-219ENST00000526299 BOD1Q96IK1 185 aa4.05□□□□□ -1.76
ECHDC1-219ENST00000526299 C8orf37Q96NL8 207 aa4.05□□□□□ -1.76
ECHDC1-219ENST00000526299 OSBPL2Q9H1P3 480 aa4.05□□□□□ -1.76
ECHDC1-219ENST00000526299 GALNT9Q9HCQ5 603 aa4.05□□□□□ -1.76
ECHDC1-219ENST00000526299 AATKQ6ZMQ8 1374 aa4.04□□□□□ -1.76
ECHDC1-219ENST00000526299 RPTORQ8N122 1335 aa4.04□□□□□ -1.76
ECHDC1-219ENST00000526299 POU3F3P20264 500 aaPredicted RBP4.04□□□□□ -1.76
ECHDC1-219ENST00000526299 ADSLP30566 484 aaPredicted RBP4.04□□□□□ -1.76
ECHDC1-219ENST00000526299 PHC1P78364 1004 aa4.04□□□□□ -1.76
ECHDC1-219ENST00000526299 BMS1Q14692 1282 aaKnown RBP4.04□□□□□ -1.76
ECHDC1-219ENST00000526299 SMC1BQ8NDV3 1235 aa4.04□□□□□ -1.76
ECHDC1-219ENST00000526299 DPF1Q92782 380 aa4.04□□□□□ -1.76
ECHDC1-219ENST00000526299 PTCD3Q96EY7 689 aaKnown RBP4.04□□□□□ -1.76
ECHDC1-219ENST00000526299 FUBP3Q96I24 572 aaKnown RBP eCLIP4.04□□□□□ -1.76
ECHDC1-219ENST00000526299 UROC1Q96N76 676 aa4.04□□□□□ -1.76
ECHDC1-219ENST00000526299 HEPHQ9BQS7 1158 aa4.04□□□□□ -1.76
ECHDC1-219ENST00000526299 BRIP1Q9BX63 1249 aa4.04□□□□□ -1.76
ECHDC1-219ENST00000526299 REXO4Q9GZR2 422 aaKnown RBP4.04□□□□□ -1.76
ECHDC1-219ENST00000526299 KCTD5Q9NXV2 234 aa4.04□□□□□ -1.76
ECHDC1-219ENST00000526299 EDARQ9UNE0 448 aa4.04□□□□□ -1.76
ECHDC1-219ENST00000526299 CDY2AQ9Y6F7 541 aa4.04□□□□□ -1.76
ECHDC1-219ENST00000526299 MANSC4A6NHS7 340 aaPredicted RBP4.03□□□□□ -1.76
ECHDC1-219ENST00000526299 WNT10BO00744 389 aa4.03□□□□□ -1.76
ECHDC1-219ENST00000526299 CELA2AP08217 269 aa4.03□□□□□ -1.76
ECHDC1-219ENST00000526299 SNRPA1P09661 255 aaKnown RBP4.03□□□□□ -1.76
ECHDC1-219ENST00000526299 CRHR1P34998 444 aa4.03□□□□□ -1.76
ECHDC1-219ENST00000526299 HSD11B2P80365 405 aa4.03□□□□□ -1.76
ECHDC1-219ENST00000526299 OCRLQ01968 901 aa4.03□□□□□ -1.76
ECHDC1-219ENST00000526299 NFE2L2Q16236 605 aa4.03□□□□□ -1.76
ECHDC1-219ENST00000526299 CYP2A13Q16696 494 aa4.03□□□□□ -1.76
ECHDC1-219ENST00000526299 PITRM1Q5JRX3 1037 aa4.03□□□□□ -1.76
ECHDC1-219ENST00000526299 LRRTM3Q86VH5 581 aa4.03□□□□□ -1.76
ECHDC1-219ENST00000526299 PDPRQ8NCN5 879 aa4.03□□□□□ -1.76
ECHDC1-219ENST00000526299 FBXO18Q8NFZ0 1043 aa4.03□□□□□ -1.76
ECHDC1-219ENST00000526299 ZNF480Q8WV37 535 aa4.03□□□□□ -1.76
ECHDC1-219ENST00000526299 WASF1Q92558 559 aa4.03□□□□□ -1.76
ECHDC1-219ENST00000526299 MRFAP1L1Q96HT8 127 aa4.03□□□□□ -1.76
ECHDC1-219ENST00000526299 DNAJC2Q99543 621 aaKnown RBP4.03□□□□□ -1.76
ECHDC1-219ENST00000526299 WNT8AQ9H1J5 351 aa4.03□□□□□ -1.76
ECHDC1-219ENST00000526299 RNPEPQ9H4A4 650 aa4.03□□□□□ -1.76
ECHDC1-219ENST00000526299 UNKLQ9H9P5 680 aaKnown RBP4.03□□□□□ -1.76
ECHDC1-219ENST00000526299 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.03□□□□□ -1.76
ECHDC1-219ENST00000526299 USP25Q9UHP3 1055 aa4.03□□□□□ -1.76
ECHDC1-219ENST00000526299 NOC2LQ9Y3T9 749 aaKnown RBP4.03□□□□□ -1.76
ECHDC1-219ENST00000526299 FAM83GA6ND36 823 aa4.02□□□□□ -1.77
ECHDC1-219ENST00000526299 AKR1B10O60218 316 aa4.02□□□□□ -1.77
ECHDC1-219ENST00000526299 KDM1AO60341 852 aa4.02□□□□□ -1.77
ECHDC1-219ENST00000526299 GPANK1O95872 356 aa4.02□□□□□ -1.77
ECHDC1-219ENST00000526299 HOXB6P17509 224 aaKnown RBP4.02□□□□□ -1.77
ECHDC1-219ENST00000526299 POU3F2P20265 443 aaPredicted RBP4.02□□□□□ -1.77
ECHDC1-219ENST00000526299 IL2P60568 153 aa4.02□□□□□ -1.77
ECHDC1-219ENST00000526299 GPR162Q16538 588 aa4.02□□□□□ -1.77
ECHDC1-219ENST00000526299 SRSF7Q16629 238 aaKnown RBP eCLIP4.02□□□□□ -1.77
ECHDC1-219ENST00000526299 RRP12Q5JTH9 1297 aaKnown RBP4.02□□□□□ -1.77
ECHDC1-219ENST00000526299 BROXQ5VW32 411 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms