RNA–Protein interactions for RNA: ENST00000525670.5

SVIP-202, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-202ENST00000525670 SHROOM1Q2M3G4 852 aaPredicted RBP6.18□□□□□ -1.42
SVIP-202ENST00000525670 DEFB115Q30KQ5 88 aa6.18□□□□□ -1.42
SVIP-202ENST00000525670 SLC9C2Q5TAH2 1124 aa6.18□□□□□ -1.42
SVIP-202ENST00000525670 RSPO2Q6UXX9 243 aaPredicted RBP6.18□□□□□ -1.42
SVIP-202ENST00000525670 RASAL3Q86YV0 1011 aa6.18□□□□□ -1.42
SVIP-202ENST00000525670 LCORLQ8N3X6 602 aa6.18□□□□□ -1.42
SVIP-202ENST00000525670 TTC9BQ8N6N2 239 aa6.18□□□□□ -1.42
SVIP-202ENST00000525670 TGFBRAP1Q8WUH2 860 aa6.18□□□□□ -1.42
SVIP-202ENST00000525670 SDR42E1Q8WUS8 393 aa6.18□□□□□ -1.42
SVIP-202ENST00000525670 WRNIP1Q96S55 665 aa6.18□□□□□ -1.42
SVIP-202ENST00000525670 TMEM209Q96SK2 561 aa6.18□□□□□ -1.42
SVIP-202ENST00000525670 IER2Q9BTL4 223 aa6.18□□□□□ -1.42
SVIP-202ENST00000525670 FSD1Q9BTV5 496 aa6.18□□□□□ -1.42
SVIP-202ENST00000525670 RWDD1Q9H446 243 aaPredicted RBP6.18□□□□□ -1.42
SVIP-202ENST00000525670 ST7Q9NRC1 585 aa6.18□□□□□ -1.42
SVIP-202ENST00000525670 ECHDC1Q9NTX5 307 aa6.18□□□□□ -1.42
SVIP-202ENST00000525670 HSPBP1Q9NZL4 362 aa6.18□□□□□ -1.42
SVIP-202ENST00000525670 MYOTQ9UBF9 498 aa6.18□□□□□ -1.42
SVIP-202ENST00000525670 FLT1P17948 1338 aa6.18□□□□□ -1.42
SVIP-202ENST00000525670 PDS5AQ29RF7 1337 aaKnown RBP6.18□□□□□ -1.42
SVIP-202ENST00000525670 WDR33Q9C0J8 1336 aaKnown RBP6.18□□□□□ -1.42
SVIP-202ENST00000525670 DOCK1Q14185 1865 aa6.17□□□□□ -1.42
SVIP-202ENST00000525670 MYH8P13535 1937 aa6.17□□□□□ -1.42
SVIP-202ENST00000525670 LAMB1P07942 1786 aa6.17□□□□□ -1.42
SVIP-202ENST00000525670 CYP2D7A0A087X1C5 515 aa6.17□□□□□ -1.42
SVIP-202ENST00000525670 RASSF10A6NK89 507 aa6.17□□□□□ -1.42
SVIP-202ENST00000525670 M0R2C6 588 aa6.17□□□□□ -1.42
SVIP-202ENST00000525670 KRIT1O00522 736 aa6.17□□□□□ -1.42
SVIP-202ENST00000525670 PRKAB2O43741 272 aa6.17□□□□□ -1.42
SVIP-202ENST00000525670 DLX3O60479 287 aa6.17□□□□□ -1.42
SVIP-202ENST00000525670 CYP1A1P04798 512 aaPredicted RBP6.17□□□□□ -1.42
SVIP-202ENST00000525670 CYP2D6P10635 497 aa6.17□□□□□ -1.42
SVIP-202ENST00000525670 RHBDL3P58872 404 aa6.17□□□□□ -1.42
SVIP-202ENST00000525670 GSTO1P78417 241 aa6.17□□□□□ -1.42
SVIP-202ENST00000525670 MAP3K12Q12852 859 aa6.17□□□□□ -1.42
SVIP-202ENST00000525670 HDAC1Q13547 482 aaPredicted RBP6.17□□□□□ -1.42
SVIP-202ENST00000525670 VGLL4Q14135 290 aa6.17□□□□□ -1.42
SVIP-202ENST00000525670 HSP90AA2PQ14568 343 aaPredicted RBP6.17□□□□□ -1.42
SVIP-202ENST00000525670 SURF1Q15526 300 aa6.17□□□□□ -1.42
SVIP-202ENST00000525670 RGMBQ6NW40 437 aa6.17□□□□□ -1.42
SVIP-202ENST00000525670 CCDC129Q6ZRS4 1044 aa6.17□□□□□ -1.42
SVIP-202ENST00000525670 ARMC9Q7Z3E5 817 aa6.17□□□□□ -1.42
SVIP-202ENST00000525670 TRIM48Q8IWZ4 208 aa6.17□□□□□ -1.42
SVIP-202ENST00000525670 SLC43A3Q8NBI5 491 aa6.17□□□□□ -1.42
SVIP-202ENST00000525670 ZKSCAN4Q969J2 545 aaPredicted RBP6.17□□□□□ -1.42
SVIP-202ENST00000525670 RILPL2Q969X0 211 aa6.17□□□□□ -1.42
SVIP-202ENST00000525670 SGSM3Q96HU1 749 aa6.17□□□□□ -1.42
SVIP-202ENST00000525670 LOXL4Q96JB6 756 aa6.17□□□□□ -1.42
SVIP-202ENST00000525670 SEC62Q99442 399 aaKnown RBP6.17□□□□□ -1.42
SVIP-202ENST00000525670 SSBP3Q9BWW4 388 aaPredicted RBP6.17□□□□□ -1.42
SVIP-202ENST00000525670 TMEM168Q9H0V1 697 aa6.17□□□□□ -1.42
SVIP-202ENST00000525670 L2HGDHQ9H9P8 463 aa6.17□□□□□ -1.42
SVIP-202ENST00000525670 SLC6A20Q9NP91 592 aa6.17□□□□□ -1.42
SVIP-202ENST00000525670 ASH2LQ9UBL3 628 aa6.17□□□□□ -1.42
SVIP-202ENST00000525670 ZNF536O15090 1300 aa6.17□□□□□ -1.42
SVIP-202ENST00000525670 GPR75-ASB3A0A0A6YYF3 556 aa6.16□□□□□ -1.42
SVIP-202ENST00000525670 SMIM22K7EJ46 135 aa6.16□□□□□ -1.42
SVIP-202ENST00000525670 LDHCP07864 332 aa6.16□□□□□ -1.42
SVIP-202ENST00000525670 ATP5JP18859 108 aa6.16□□□□□ -1.42
SVIP-202ENST00000525670 DNAJA1P31689 397 aaKnown RBP6.16□□□□□ -1.42
SVIP-202ENST00000525670 MLLT6P55198 1093 aaPredicted RBP6.16□□□□□ -1.42
SVIP-202ENST00000525670 DDR2Q16832 855 aa6.16□□□□□ -1.42
SVIP-202ENST00000525670 CPZQ66K79 652 aa6.16□□□□□ -1.42
SVIP-202ENST00000525670 GLB1LQ6UWU2 654 aa6.16□□□□□ -1.42
SVIP-202ENST00000525670 ANKS3Q6ZW76 656 aa6.16□□□□□ -1.42
SVIP-202ENST00000525670 CHD1LQ86WJ1 897 aa6.16□□□□□ -1.42
SVIP-202ENST00000525670 CELF2-AS1Q8N7Q2 184 aa6.16□□□□□ -1.42
SVIP-202ENST00000525670 DNAJC5GQ8N7S2 189 aa6.16□□□□□ -1.42
SVIP-202ENST00000525670 HNRNPLLQ8WVV9 542 aaKnown RBP6.16□□□□□ -1.42
SVIP-202ENST00000525670 GCC1Q96CN9 775 aa6.16□□□□□ -1.42
SVIP-202ENST00000525670 ZSWIM3Q96MP5 696 aa6.16□□□□□ -1.42
SVIP-202ENST00000525670 JAM3Q9BX67 310 aa6.16□□□□□ -1.42
SVIP-202ENST00000525670 C1QTNF3Q9BXJ4 246 aa6.16□□□□□ -1.42
SVIP-202ENST00000525670 PUS7LQ9H0K6 701 aaKnown RBP6.16□□□□□ -1.42
SVIP-202ENST00000525670 OSBPL5Q9H0X9 879 aaPredicted RBP6.16□□□□□ -1.42
SVIP-202ENST00000525670 SALL3Q9BXA9 1300 aa6.16□□□□□ -1.42
SVIP-202ENST00000525670 ZSWIM8A7E2V4 1837 aa6.15□□□□□ -1.42
SVIP-202ENST00000525670 TCRBV5S4A2TA0A5A2 114 aa6.15□□□□□ -1.42
SVIP-202ENST00000525670 ERC2O15083 957 aa6.15□□□□□ -1.42
SVIP-202ENST00000525670 FOXN1O15353 648 aa6.15□□□□□ -1.42
SVIP-202ENST00000525670 B4GALT3O60512 393 aa6.15□□□□□ -1.42
SVIP-202ENST00000525670 MSCO60682 206 aa6.15□□□□□ -1.42
SVIP-202ENST00000525670 BAG3O95817 575 aa6.15□□□□□ -1.42
SVIP-202ENST00000525670 ADD2P35612 726 aa6.15□□□□□ -1.42
SVIP-202ENST00000525670 PDE1AP54750 535 aa6.15□□□□□ -1.42
SVIP-202ENST00000525670 KIF23Q02241 960 aaPredicted RBP6.15□□□□□ -1.42
SVIP-202ENST00000525670 NUCB1Q02818 461 aa6.15□□□□□ -1.42
SVIP-202ENST00000525670 TTF1Q15361 905 aaPredicted RBP6.15□□□□□ -1.42
SVIP-202ENST00000525670 SUPT20HL1Q3ZLR7 823 aa6.15□□□□□ -1.42
SVIP-202ENST00000525670 USP53Q70EK8 1073 aa6.15□□□□□ -1.42
SVIP-202ENST00000525670 PLEKHH3Q7Z736 793 aa6.15□□□□□ -1.42
SVIP-202ENST00000525670 SMC5Q8IY18 1101 aa6.15□□□□□ -1.42
SVIP-202ENST00000525670 SLC44A5Q8NCS7 719 aa6.15□□□□□ -1.42
SVIP-202ENST00000525670 PIP4K2CQ8TBX8 421 aa6.15□□□□□ -1.42
SVIP-202ENST00000525670 FAM151AQ8WW52 585 aa6.15□□□□□ -1.42
SVIP-202ENST00000525670 CHMP4CQ96CF2 233 aa6.15□□□□□ -1.42
SVIP-202ENST00000525670 OPTNQ96CV9 577 aa6.15□□□□□ -1.42
SVIP-202ENST00000525670 MBD6Q96DN6 1003 aa6.15□□□□□ -1.42
SVIP-202ENST00000525670 WNK4Q96J92 1243 aa6.15□□□□□ -1.42
SVIP-202ENST00000525670 PHF20Q9BVI0 1012 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms