RNA–Protein interactions for RNA: ENST00000521640.5

CTNNA1-228, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-228ENST00000521640 IGKV6D-21A0A0A0MT36 114 aa7.28□□□□□ -1.24
CTNNA1-228ENST00000521640 A0A0A6YYK5 440 aaPredicted RBP7.28□□□□□ -1.24
CTNNA1-228ENST00000521640 TARSL2A2RTX5 802 aaKnown RBP7.28□□□□□ -1.24
CTNNA1-228ENST00000521640 TLR2O60603 784 aa7.28□□□□□ -1.24
CTNNA1-228ENST00000521640 ARHGEF15O94989 841 aa7.28□□□□□ -1.24
CTNNA1-228ENST00000521640 TGFB3P10600 412 aa7.28□□□□□ -1.24
CTNNA1-228ENST00000521640 MYCLP12524 364 aaPredicted RBP7.28□□□□□ -1.24
CTNNA1-228ENST00000521640 GTF2H1P32780 548 aa7.28□□□□□ -1.24
CTNNA1-228ENST00000521640 STAT1P42224 750 aa7.28□□□□□ -1.24
CTNNA1-228ENST00000521640 FMO5P49326 533 aa7.28□□□□□ -1.24
CTNNA1-228ENST00000521640 FAM193AP78312 1265 aa7.28□□□□□ -1.24
CTNNA1-228ENST00000521640 KLHL30Q0D2K2 578 aa7.28□□□□□ -1.24
CTNNA1-228ENST00000521640 DMP1Q13316 513 aaPredicted RBP7.28□□□□□ -1.24
CTNNA1-228ENST00000521640 PPIL2Q13356 520 aa7.28□□□□□ -1.24
CTNNA1-228ENST00000521640 BMS1Q14692 1282 aaKnown RBP7.28□□□□□ -1.24
CTNNA1-228ENST00000521640 STXBP2Q15833 593 aa7.28□□□□□ -1.24
CTNNA1-228ENST00000521640 TDRD12Q587J7 1177 aaKnown RBP7.28□□□□□ -1.24
CTNNA1-228ENST00000521640 XKR3Q5GH77 459 aa7.28□□□□□ -1.24
CTNNA1-228ENST00000521640 FBXO38Q6PIJ6 1188 aa7.28□□□□□ -1.24
CTNNA1-228ENST00000521640 KCNV1Q6PIU1 500 aa7.28□□□□□ -1.24
CTNNA1-228ENST00000521640 IRF2BP2Q7Z5L9 587 aa7.28□□□□□ -1.24
CTNNA1-228ENST00000521640 ERO1BQ86YB8 467 aa7.28□□□□□ -1.24
CTNNA1-228ENST00000521640 ANKRD13AQ8IZ07 590 aa7.28□□□□□ -1.24
CTNNA1-228ENST00000521640 SYCP3Q8IZU3 236 aa7.28□□□□□ -1.24
CTNNA1-228ENST00000521640 SVOPQ8N4V2 548 aa7.28□□□□□ -1.24
CTNNA1-228ENST00000521640 XXYLT1Q8NBI6 393 aa7.28□□□□□ -1.24
CTNNA1-228ENST00000521640 NOX5Q96PH1 765 aa7.28□□□□□ -1.24
CTNNA1-228ENST00000521640 SPAG5Q96R06 1193 aa7.28□□□□□ -1.24
CTNNA1-228ENST00000521640 STK33Q9BYT3 514 aa7.28□□□□□ -1.24
CTNNA1-228ENST00000521640 LACRTQ9GZZ8 138 aa7.28□□□□□ -1.24
CTNNA1-228ENST00000521640 SIX2Q9NPC8 291 aa7.28□□□□□ -1.24
CTNNA1-228ENST00000521640 HOMER2Q9NSB8 354 aa7.28□□□□□ -1.24
CTNNA1-228ENST00000521640 FAM53CQ9NYF3 392 aa7.28□□□□□ -1.24
CTNNA1-228ENST00000521640 OGFRQ9NZT2 677 aa7.28□□□□□ -1.24
CTNNA1-228ENST00000521640 GCNT4Q9P109 453 aa7.28□□□□□ -1.24
CTNNA1-228ENST00000521640 SLC9A2Q9UBY0 812 aa7.28□□□□□ -1.24
CTNNA1-228ENST00000521640 GUCA1BQ9UMX6 200 aa7.28□□□□□ -1.24
CTNNA1-228ENST00000521640 SNX12Q9UMY4 172 aa7.28□□□□□ -1.24
CTNNA1-228ENST00000521640 SAMM50Q9Y512 469 aa7.28□□□□□ -1.24
CTNNA1-228ENST00000521640 PCDHGC5Q9Y5F6 944 aa7.28□□□□□ -1.24
CTNNA1-228ENST00000521640 A0A0U1RQJ8 604 aa7.27□□□□□ -1.25
CTNNA1-228ENST00000521640 DDX39AO00148 427 aaKnown RBP7.27□□□□□ -1.25
CTNNA1-228ENST00000521640 GAS2O43903 313 aaKnown RBP7.27□□□□□ -1.25
CTNNA1-228ENST00000521640 EXOC3O60645 756 aa7.27□□□□□ -1.25
CTNNA1-228ENST00000521640 ATP9AO75110 1047 aa7.27□□□□□ -1.25
CTNNA1-228ENST00000521640 ERLIN1O75477 346 aa7.27□□□□□ -1.25
CTNNA1-228ENST00000521640 STBD1O95210 358 aa7.27□□□□□ -1.25
CTNNA1-228ENST00000521640 ZRANB2O95218 330 aaKnown RBP eCLIP7.27□□□□□ -1.25
CTNNA1-228ENST00000521640 PIGRP01833 764 aa7.27□□□□□ -1.25
CTNNA1-228ENST00000521640 SUPT20HL2P0C7V6 817 aa7.27□□□□□ -1.25
CTNNA1-228ENST00000521640 BMP4P12644 408 aa7.27□□□□□ -1.25
CTNNA1-228ENST00000521640 GARTP22102 1010 aa7.27□□□□□ -1.25
CTNNA1-228ENST00000521640 CASP4P49662 377 aa7.27□□□□□ -1.25
CTNNA1-228ENST00000521640 NPEPPSP55786 919 aa7.27□□□□□ -1.25
CTNNA1-228ENST00000521640 ACTR2P61160 394 aa7.27□□□□□ -1.25
CTNNA1-228ENST00000521640 MYL7Q01449 175 aa7.27□□□□□ -1.25
CTNNA1-228ENST00000521640 KCNA1Q09470 495 aa7.27□□□□□ -1.25
CTNNA1-228ENST00000521640 SFSWAPQ12872 951 aaKnown RBP7.27□□□□□ -1.25
CTNNA1-228ENST00000521640 RAPGEF1Q13905 1077 aa7.27□□□□□ -1.25
CTNNA1-228ENST00000521640 TCEAL1Q15170 157 aa7.27□□□□□ -1.25
CTNNA1-228ENST00000521640 NAB2Q15742 525 aa7.27□□□□□ -1.25
CTNNA1-228ENST00000521640 UGCGQ16739 394 aa7.27□□□□□ -1.25
CTNNA1-228ENST00000521640 ZC2HC1CQ53FD0 456 aaPredicted RBP7.27□□□□□ -1.25
CTNNA1-228ENST00000521640 BRDTQ58F21 947 aaPredicted RBP7.27□□□□□ -1.25
CTNNA1-228ENST00000521640 XKR9Q5GH70 373 aa7.27□□□□□ -1.25
CTNNA1-228ENST00000521640 DCAF17Q5H9S7 520 aaPredicted RBP7.27□□□□□ -1.25
CTNNA1-228ENST00000521640 WDR93Q6P2C0 686 aa7.27□□□□□ -1.25
CTNNA1-228ENST00000521640 TMCO3Q6UWJ1 677 aa7.27□□□□□ -1.25
CTNNA1-228ENST00000521640 ABHD15Q6UXT9 468 aa7.27□□□□□ -1.25
CTNNA1-228ENST00000521640 C1orf229Q6ZS94 237 aaPredicted RBP7.27□□□□□ -1.25
CTNNA1-228ENST00000521640 HAUS6Q7Z4H7 955 aa7.27□□□□□ -1.25
CTNNA1-228ENST00000521640 EXOC8Q8IYI6 725 aa7.27□□□□□ -1.25
CTNNA1-228ENST00000521640 TMEM161BQ8NDZ6 487 aa7.27□□□□□ -1.25
CTNNA1-228ENST00000521640 SHCBP1Q8NEM2 672 aa7.27□□□□□ -1.25
CTNNA1-228ENST00000521640 AFAP1L1Q8TED9 768 aa7.27□□□□□ -1.25
CTNNA1-228ENST00000521640 ATRIPQ8WXE1 791 aa7.27□□□□□ -1.25
CTNNA1-228ENST00000521640 WNK4Q96J92 1243 aa7.27□□□□□ -1.25
CTNNA1-228ENST00000521640 FBXL18Q96ME1 805 aa7.27□□□□□ -1.25
CTNNA1-228ENST00000521640 UIMC1Q96RL1 719 aa7.27□□□□□ -1.25
CTNNA1-228ENST00000521640 ATP6V0A4Q9HBG4 840 aa7.27□□□□□ -1.25
CTNNA1-228ENST00000521640 KIAA1586Q9HCI6 787 aa7.27□□□□□ -1.25
CTNNA1-228ENST00000521640 NEUROD4Q9HD90 331 aa7.27□□□□□ -1.25
CTNNA1-228ENST00000521640 NLRC4Q9NPP4 1024 aa7.27□□□□□ -1.25
CTNNA1-228ENST00000521640 PDLIM7Q9NR12 457 aa7.27□□□□□ -1.25
CTNNA1-228ENST00000521640 KLK14Q9P0G3 267 aa7.27□□□□□ -1.25
CTNNA1-228ENST00000521640 APEX2Q9UBZ4 518 aa7.27□□□□□ -1.25
CTNNA1-228ENST00000521640 AGTPBP1Q9UPW5 1226 aa7.27□□□□□ -1.25
CTNNA1-228ENST00000521640 COQ4Q9Y3A0 265 aa7.27□□□□□ -1.25
CTNNA1-228ENST00000521640 HYOU1Q9Y4L1 999 aa7.27□□□□□ -1.25
CTNNA1-228ENST00000521640 A0A0U1RQG5 324 aaPredicted RBP7.26□□□□□ -1.25
CTNNA1-228ENST00000521640 GRID2IPA4D2P6 1211 aa7.26□□□□□ -1.25
CTNNA1-228ENST00000521640 TMEM88BA6NKF7 163 aa7.26□□□□□ -1.25
CTNNA1-228ENST00000521640 F8VZ95 297 aa7.26□□□□□ -1.25
CTNNA1-228ENST00000521640 CLIC2O15247 247 aa7.26□□□□□ -1.25
CTNNA1-228ENST00000521640 ZC3H11AO75152 810 aaKnown RBP eCLIP7.26□□□□□ -1.25
CTNNA1-228ENST00000521640 CLSTN1O94985 981 aa7.26□□□□□ -1.25
CTNNA1-228ENST00000521640 ABL1P00519 1130 aa7.26□□□□□ -1.25
CTNNA1-228ENST00000521640 PLEKP08567 350 aaPredicted RBP7.26□□□□□ -1.25
CTNNA1-228ENST00000521640 SLC9A1P19634 815 aa7.26□□□□□ -1.25
CTNNA1-228ENST00000521640 SOX5P35711 763 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms