RNA–Protein interactions for RNA: ENST00000518723.1

TRAPPC9-204, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-204ENST00000518723 RAB33AQ14088 237 aa13.7□□□□□ -0.22
TRAPPC9-204ENST00000518723 PABPC1LQ4VXU2 614 aaKnown RBP13.7□□□□□ -0.22
TRAPPC9-204ENST00000518723 FAM171A1Q5VUB5 890 aa13.7□□□□□ -0.22
TRAPPC9-204ENST00000518723 ZNF852Q6ZMS4 543 aa13.7□□□□□ -0.22
TRAPPC9-204ENST00000518723 MAMSTRQ6ZN01 415 aa13.7□□□□□ -0.22
TRAPPC9-204ENST00000518723 NEK8Q86SG6 692 aa13.7□□□□□ -0.22
TRAPPC9-204ENST00000518723 SLC7A14Q8TBB6 771 aa13.7□□□□□ -0.22
TRAPPC9-204ENST00000518723 ASAP3Q8TDY4 903 aa13.7□□□□□ -0.22
TRAPPC9-204ENST00000518723 DYDC2Q96IM9 177 aa13.7□□□□□ -0.22
TRAPPC9-204ENST00000518723 GDE1Q9NZC3 331 aa13.7□□□□□ -0.22
TRAPPC9-204ENST00000518723 KLK14Q9P0G3 267 aa13.7□□□□□ -0.22
TRAPPC9-204ENST00000518723 CACNG4Q9UBN1 327 aa13.7□□□□□ -0.22
TRAPPC9-204ENST00000518723 PARP2Q9UGN5 583 aa13.7□□□□□ -0.22
TRAPPC9-204ENST00000518723 GMEB2Q9UKD1 530 aa13.7□□□□□ -0.22
TRAPPC9-204ENST00000518723 USP18Q9UMW8 372 aa13.7□□□□□ -0.22
TRAPPC9-204ENST00000518723 POLIQ9UNA4 740 aa13.7□□□□□ -0.22
TRAPPC9-204ENST00000518723 MRPS17Q9Y2R5 130 aaKnown RBP13.7□□□□□ -0.22
TRAPPC9-204ENST00000518723 DCDC2BA2VCK2 349 aa13.69□□□□□ -0.22
TRAPPC9-204ENST00000518723 SHISA7A6NL88 538 aa13.69□□□□□ -0.22
TRAPPC9-204ENST00000518723 ADAM12O43184 909 aa13.69□□□□□ -0.22
TRAPPC9-204ENST00000518723 CDC45O75419 566 aa13.69□□□□□ -0.22
TRAPPC9-204ENST00000518723 DGAT1O75907 488 aa13.69□□□□□ -0.22
TRAPPC9-204ENST00000518723 LYPLA2O95372 231 aa13.69□□□□□ -0.22
TRAPPC9-204ENST00000518723 TDGF1P13385 188 aa13.69□□□□□ -0.22
TRAPPC9-204ENST00000518723 GLRA2P23416 452 aa13.69□□□□□ -0.22
TRAPPC9-204ENST00000518723 ADCY1Q08828 1119 aa13.69□□□□□ -0.22
TRAPPC9-204ENST00000518723 CTTNQ14247 550 aaKnown RBP13.69□□□□□ -0.22
TRAPPC9-204ENST00000518723 AXDND1Q5T1B0 1012 aaPredicted RBP13.69□□□□□ -0.22
TRAPPC9-204ENST00000518723 TSSK4Q6SA08 328 aa13.69□□□□□ -0.22
TRAPPC9-204ENST00000518723 CEP57Q86XR8 500 aa13.69□□□□□ -0.22
TRAPPC9-204ENST00000518723 HASPINQ8TF76 798 aa13.69□□□□□ -0.22
TRAPPC9-204ENST00000518723 DNASE1L2Q92874 299 aa13.69□□□□□ -0.22
TRAPPC9-204ENST00000518723 NAP1L4Q99733 375 aaKnown RBP13.69□□□□□ -0.22
TRAPPC9-204ENST00000518723 IER2Q9BTL4 223 aa13.69□□□□□ -0.22
TRAPPC9-204ENST00000518723 PARD6AQ9NPB6 346 aa13.69□□□□□ -0.22
TRAPPC9-204ENST00000518723 AVENQ9NQS1 362 aaPredicted RBP13.69□□□□□ -0.22
TRAPPC9-204ENST00000518723 HCFC1R1Q9NWW0 138 aa13.69□□□□□ -0.22
TRAPPC9-204ENST00000518723 DNMT3BQ9UBC3 853 aaKnown RBP13.69□□□□□ -0.22
TRAPPC9-204ENST00000518723 F5P12259 2224 aa13.68□□□□□ -0.22
TRAPPC9-204ENST00000518723 CASTOR2A6NHX0 329 aa13.68□□□□□ -0.22
TRAPPC9-204ENST00000518723 PTGESO14684 152 aa13.68□□□□□ -0.22
TRAPPC9-204ENST00000518723 SLITRK3O94933 977 aa13.68□□□□□ -0.22
TRAPPC9-204ENST00000518723 PSMA5P28066 241 aa13.68□□□□□ -0.22
TRAPPC9-204ENST00000518723 NRLP54845 237 aa13.68□□□□□ -0.22
TRAPPC9-204ENST00000518723 CYP4A11Q02928 519 aa13.68□□□□□ -0.22
TRAPPC9-204ENST00000518723 MTAPQ13126 283 aa13.68□□□□□ -0.22
TRAPPC9-204ENST00000518723 NAB2Q15742 525 aa13.68□□□□□ -0.22
TRAPPC9-204ENST00000518723 ST3GAL2Q16842 350 aa13.68□□□□□ -0.22
TRAPPC9-204ENST00000518723 NCAPH2Q6IBW4 605 aa13.68□□□□□ -0.22
TRAPPC9-204ENST00000518723 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.68□□□□□ -0.22
TRAPPC9-204ENST00000518723 PPP4R3CPQ6ZMV5 832 aa13.68□□□□□ -0.22
TRAPPC9-204ENST00000518723 CDR2LQ86X02 465 aaPredicted RBP13.68□□□□□ -0.22
TRAPPC9-204ENST00000518723 ZNF687Q8N1G0 1237 aa13.68□□□□□ -0.22
TRAPPC9-204ENST00000518723 PRIMPOLQ96LW4 560 aa13.68□□□□□ -0.22
TRAPPC9-204ENST00000518723 ANKEF1Q9NU02 776 aa13.68□□□□□ -0.22
TRAPPC9-204ENST00000518723 MRPS23Q9Y3D9 190 aaKnown RBP13.68□□□□□ -0.22
TRAPPC9-204ENST00000518723 CCDC194A0A1B0GVG4 234 aa13.67□□□□□ -0.22
TRAPPC9-204ENST00000518723 CPLX1O14810 134 aa13.67□□□□□ -0.22
TRAPPC9-204ENST00000518723 CCNT1O60563 726 aaKnown RBP13.67□□□□□ -0.22
TRAPPC9-204ENST00000518723 LRP3O75074 770 aa13.67□□□□□ -0.22
TRAPPC9-204ENST00000518723 THP07101 528 aa13.67□□□□□ -0.22
TRAPPC9-204ENST00000518723 FGFR3P22607 806 aa13.67□□□□□ -0.22
TRAPPC9-204ENST00000518723 OR1D2P34982 312 aa13.67□□□□□ -0.22
TRAPPC9-204ENST00000518723 LAIR1Q6GTX8 287 aa13.67□□□□□ -0.22
TRAPPC9-204ENST00000518723 TPH2Q8IWU9 490 aa13.67□□□□□ -0.22
TRAPPC9-204ENST00000518723 SLFN12Q8IYM2 578 aa13.67□□□□□ -0.22
TRAPPC9-204ENST00000518723 CELF5Q8N6W0 485 aaKnown RBP13.67□□□□□ -0.22
TRAPPC9-204ENST00000518723 NETO1Q8TDF5 533 aa13.67□□□□□ -0.22
TRAPPC9-204ENST00000518723 ING5Q8WYH8 240 aa13.67□□□□□ -0.22
TRAPPC9-204ENST00000518723 ELSPBP1Q96BH3 223 aa13.67□□□□□ -0.22
TRAPPC9-204ENST00000518723 AIFM3Q96NN9 605 aa13.67□□□□□ -0.22
TRAPPC9-204ENST00000518723 HSD17B14Q9BPX1 270 aa13.67□□□□□ -0.22
TRAPPC9-204ENST00000518723 PLA2G2FQ9BZM2 168 aa13.67□□□□□ -0.22
TRAPPC9-204ENST00000518723 CHRDQ9H2X0 955 aa13.67□□□□□ -0.22
TRAPPC9-204ENST00000518723 HEBP1Q9NRV9 189 aa13.67□□□□□ -0.22
TRAPPC9-204ENST00000518723 MTRRQ9UBK8 725 aa13.67□□□□□ -0.22
TRAPPC9-204ENST00000518723 CACNA1GO43497 2377 aa13.67□□□□□ -0.22
TRAPPC9-204ENST00000518723 ARID2Q68CP9 1835 aa13.67□□□□□ -0.22
TRAPPC9-204ENST00000518723 TMEM189-UBE2V1I3L0A0 370 aa13.66□□□□□ -0.22
TRAPPC9-204ENST00000518723 MAN2B1O00754 1011 aa13.66□□□□□ -0.22
TRAPPC9-204ENST00000518723 SLC30A4O14863 429 aa13.66□□□□□ -0.22
TRAPPC9-204ENST00000518723 MARCH6O60337 910 aa13.66□□□□□ -0.22
TRAPPC9-204ENST00000518723 RETP07949 1114 aa13.66□□□□□ -0.22
TRAPPC9-204ENST00000518723 RHOP08100 348 aa13.66□□□□□ -0.22
TRAPPC9-204ENST00000518723 TOB2Q14106 344 aaPredicted RBP13.66□□□□□ -0.22
TRAPPC9-204ENST00000518723 PPP2R5DQ14738 602 aa13.66□□□□□ -0.22
TRAPPC9-204ENST00000518723 FAM187BQ17R55 369 aa13.66□□□□□ -0.22
TRAPPC9-204ENST00000518723 SLC5A9Q2M3M2 681 aa13.66□□□□□ -0.22
TRAPPC9-204ENST00000518723 CDCA2Q69YH5 1023 aaPredicted RBP13.66□□□□□ -0.22
TRAPPC9-204ENST00000518723 TANGO2Q6ICL3 276 aa13.66□□□□□ -0.22
TRAPPC9-204ENST00000518723 POTEDQ86YR6 584 aa13.66□□□□□ -0.22
TRAPPC9-204ENST00000518723 MCRS1Q96EZ8 462 aa13.66□□□□□ -0.22
TRAPPC9-204ENST00000518723 ZNF274Q96GC6 653 aaPredicted RBP13.66□□□□□ -0.22
TRAPPC9-204ENST00000518723 YTHDC1Q96MU7 727 aaKnown RBP13.66□□□□□ -0.22
TRAPPC9-204ENST00000518723 EIF2AK1Q9BQI3 630 aaKnown RBP13.66□□□□□ -0.22
TRAPPC9-204ENST00000518723 FZD8Q9H461 694 aa13.66□□□□□ -0.22
TRAPPC9-204ENST00000518723 PRMT7Q9NVM4 692 aaPredicted RBP13.66□□□□□ -0.22
TRAPPC9-204ENST00000518723 RAB23Q9ULC3 237 aa13.66□□□□□ -0.22
TRAPPC9-204ENST00000518723 KCNJ14Q9UNX9 436 aa13.66□□□□□ -0.22
TRAPPC9-204ENST00000518723 BACE2Q9Y5Z0 518 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms