RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 CHST13Q8NET6 341 aa4.79□□□□□ -1.64
VPS13B-207ENST00000518569 CLIP3Q96DZ5 547 aa4.79□□□□□ -1.64
VPS13B-207ENST00000518569 C1GALT1C1Q96EU7 318 aa4.79□□□□□ -1.64
VPS13B-207ENST00000518569 DMRTA2Q96SC8 542 aa4.79□□□□□ -1.64
VPS13B-207ENST00000518569 MAP3K14Q99558 947 aa4.79□□□□□ -1.64
VPS13B-207ENST00000518569 LSM14BQ9BX40 385 aaKnown RBP4.79□□□□□ -1.64
VPS13B-207ENST00000518569 EPC1Q9H2F5 836 aa4.79□□□□□ -1.64
VPS13B-207ENST00000518569 MAN1C1Q9NR34 630 aa4.79□□□□□ -1.64
VPS13B-207ENST00000518569 GOLGA6AQ9NYA3 693 aa4.79□□□□□ -1.64
VPS13B-207ENST00000518569 CHPF2Q9P2E5 772 aa4.79□□□□□ -1.64
VPS13B-207ENST00000518569 AJAP1Q9UKB5 411 aaPredicted RBP4.79□□□□□ -1.64
VPS13B-207ENST00000518569 HDAC5Q9UQL6 1122 aa4.79□□□□□ -1.64
VPS13B-207ENST00000518569 POLHQ9Y253 713 aa4.79□□□□□ -1.64
VPS13B-207ENST00000518569 PCDHB1Q9Y5F3 818 aa4.79□□□□□ -1.64
VPS13B-207ENST00000518569 CXorf49A8MYA2 514 aaPredicted RBP4.78□□□□□ -1.64
VPS13B-207ENST00000518569 PRR5-ARHGAP8B1AHC4 643 aa4.78□□□□□ -1.64
VPS13B-207ENST00000518569 ERC2O15083 957 aa4.78□□□□□ -1.64
VPS13B-207ENST00000518569 ACO1P21399 889 aaKnown RBP4.78□□□□□ -1.64
VPS13B-207ENST00000518569 IL12RB1P42701 662 aa4.78□□□□□ -1.64
VPS13B-207ENST00000518569 FXR1P51114 621 aaKnown RBP eCLIP4.78□□□□□ -1.64
VPS13B-207ENST00000518569 CLRN1P58418 232 aa4.78□□□□□ -1.64
VPS13B-207ENST00000518569 CTXN1P60606 82 aa4.78□□□□□ -1.64
VPS13B-207ENST00000518569 EFEMP1Q12805 493 aa4.78□□□□□ -1.64
VPS13B-207ENST00000518569 ATP2B3Q16720 1220 aa4.78□□□□□ -1.64
VPS13B-207ENST00000518569 FAM214AQ32MH5 1076 aa4.78□□□□□ -1.64
VPS13B-207ENST00000518569 SPATS1Q496A3 300 aa4.78□□□□□ -1.64
VPS13B-207ENST00000518569 AFMIDQ63HM1 303 aa4.78□□□□□ -1.64
VPS13B-207ENST00000518569 SPTY2D1Q68D10 685 aaPredicted RBP4.78□□□□□ -1.64
VPS13B-207ENST00000518569 NAIF1Q69YI7 327 aaPredicted RBP4.78□□□□□ -1.64
VPS13B-207ENST00000518569 SEM1Q6ZVN7 128 aa4.78□□□□□ -1.64
VPS13B-207ENST00000518569 HTR3DQ70Z44 454 aa4.78□□□□□ -1.64
VPS13B-207ENST00000518569 CATIPQ7Z7H3 387 aa4.78□□□□□ -1.64
VPS13B-207ENST00000518569 GGNQ86UU5 652 aa4.78□□□□□ -1.64
VPS13B-207ENST00000518569 PLXDC1Q8IUK5 500 aa4.78□□□□□ -1.64
VPS13B-207ENST00000518569 GSPT2Q8IYD1 628 aaKnown RBP4.78□□□□□ -1.64
VPS13B-207ENST00000518569 ZFP28Q8NHY6 868 aa4.78□□□□□ -1.64
VPS13B-207ENST00000518569 SLC35G2Q8TBE7 412 aa4.78□□□□□ -1.64
VPS13B-207ENST00000518569 IFI44Q8TCB0 444 aa4.78□□□□□ -1.64
VPS13B-207ENST00000518569 DIS3LQ8TF46 1054 aaKnown RBP4.78□□□□□ -1.64
VPS13B-207ENST00000518569 KAT5Q92993 513 aa4.78□□□□□ -1.64
VPS13B-207ENST00000518569 TSR2Q969E8 191 aaKnown RBP4.78□□□□□ -1.64
VPS13B-207ENST00000518569 CPPED1Q9BRF8 314 aaPredicted RBP4.78□□□□□ -1.64
VPS13B-207ENST00000518569 DEF6Q9H4E7 631 aa4.78□□□□□ -1.64
VPS13B-207ENST00000518569 SMPD4Q9NXE4 827 aa4.78□□□□□ -1.64
VPS13B-207ENST00000518569 NOB1Q9ULX3 412 aaKnown RBP4.78□□□□□ -1.64
VPS13B-207ENST00000518569 TESMINQ9Y4I5 508 aa4.78□□□□□ -1.64
VPS13B-207ENST00000518569 KRTAP23-1A1A580 65 aa4.77□□□□□ -1.65
VPS13B-207ENST00000518569 CAPN14A8MX76 684 aa4.77□□□□□ -1.65
VPS13B-207ENST00000518569 AP1G1O43747 822 aa4.77□□□□□ -1.65
VPS13B-207ENST00000518569 MGAT1P26572 445 aa4.77□□□□□ -1.65
VPS13B-207ENST00000518569 PCSK1P29120 753 aa4.77□□□□□ -1.65
VPS13B-207ENST00000518569 MAGEA10P43363 369 aaPredicted RBP4.77□□□□□ -1.65
VPS13B-207ENST00000518569 TLE1Q04724 770 aa4.77□□□□□ -1.65
VPS13B-207ENST00000518569 DACT2Q5SW24 774 aa4.77□□□□□ -1.65
VPS13B-207ENST00000518569 ELOA2Q8IYF1 753 aaPredicted RBP4.77□□□□□ -1.65
VPS13B-207ENST00000518569 ZNF808Q8N4W9 903 aaPredicted RBP4.77□□□□□ -1.65
VPS13B-207ENST00000518569 ZGPATQ8N5A5 531 aaKnown RBP4.77□□□□□ -1.65
VPS13B-207ENST00000518569 C3orf20Q8ND61 904 aa4.77□□□□□ -1.65
VPS13B-207ENST00000518569 OR52N2Q8NGI0 321 aa4.77□□□□□ -1.65
VPS13B-207ENST00000518569 STON2Q8WXE9 905 aa4.77□□□□□ -1.65
VPS13B-207ENST00000518569 TMX3Q96JJ7 454 aa4.77□□□□□ -1.65
VPS13B-207ENST00000518569 CLPTM1LQ96KA5 538 aa4.77□□□□□ -1.65
VPS13B-207ENST00000518569 FAM167AQ96KS9 214 aa4.77□□□□□ -1.65
VPS13B-207ENST00000518569 TAAR9Q96RI9 348 aa4.77□□□□□ -1.65
VPS13B-207ENST00000518569 CDK5RAP1Q96SZ6 601 aaKnown RBP4.77□□□□□ -1.65
VPS13B-207ENST00000518569 MRI1Q9BV20 369 aa4.77□□□□□ -1.65
VPS13B-207ENST00000518569 C1QTNF3Q9BXJ4 246 aa4.77□□□□□ -1.65
VPS13B-207ENST00000518569 LDAHQ9H6V9 325 aa4.77□□□□□ -1.65
VPS13B-207ENST00000518569 KMT5AQ9NQR1 393 aa4.77□□□□□ -1.65
VPS13B-207ENST00000518569 AURKAIP1Q9NWT8 199 aaPredicted RBP4.77□□□□□ -1.65
VPS13B-207ENST00000518569 GEMIN8Q9NWZ8 242 aaKnown RBP4.77□□□□□ -1.65
VPS13B-207ENST00000518569 ACTL7AQ9Y615 435 aa4.77□□□□□ -1.65
VPS13B-207ENST00000518569 GOLGA6L6A8MZA4 724 aa4.76□□□□□ -1.65
VPS13B-207ENST00000518569 H3BML4 177 aa4.76□□□□□ -1.65
VPS13B-207ENST00000518569 WNT10BO00744 389 aa4.76□□□□□ -1.65
VPS13B-207ENST00000518569 PRPF3O43395 683 aaKnown RBP4.76□□□□□ -1.65
VPS13B-207ENST00000518569 AMHP03971 560 aa4.76□□□□□ -1.65
VPS13B-207ENST00000518569 FTH1P19P0C7X4 201 aa4.76□□□□□ -1.65
VPS13B-207ENST00000518569 RAP2AP10114 183 aa4.76□□□□□ -1.65
VPS13B-207ENST00000518569 ATP5JP18859 108 aa4.76□□□□□ -1.65
VPS13B-207ENST00000518569 FPR1P21462 350 aa4.76□□□□□ -1.65
VPS13B-207ENST00000518569 HIBADHP31937 336 aaKnown RBP4.76□□□□□ -1.65
VPS13B-207ENST00000518569 ALDH1A3P47895 512 aa4.76□□□□□ -1.65
VPS13B-207ENST00000518569 HK3P52790 923 aa4.76□□□□□ -1.65
VPS13B-207ENST00000518569 RABGGTBP53611 331 aa4.76□□□□□ -1.65
VPS13B-207ENST00000518569 KRTAP10-2P60368 255 aa4.76□□□□□ -1.65
VPS13B-207ENST00000518569 PRKD1Q15139 912 aaPredicted RBP4.76□□□□□ -1.65
VPS13B-207ENST00000518569 VPS72Q15906 364 aa4.76□□□□□ -1.65
VPS13B-207ENST00000518569 GFOD2Q3B7J2 385 aa4.76□□□□□ -1.65
VPS13B-207ENST00000518569 ANKS6Q68DC2 871 aa4.76□□□□□ -1.65
VPS13B-207ENST00000518569 EFCAB12Q6NXP0 572 aa4.76□□□□□ -1.65
VPS13B-207ENST00000518569 GADL1Q6ZQY3 521 aa4.76□□□□□ -1.65
VPS13B-207ENST00000518569 TTC8Q8TAM2 541 aa4.76□□□□□ -1.65
VPS13B-207ENST00000518569 SLC35B2Q8TB61 432 aa4.76□□□□□ -1.65
VPS13B-207ENST00000518569 ATXN2LQ8WWM7 1075 aaKnown RBP4.76□□□□□ -1.65
VPS13B-207ENST00000518569 DVL3Q92997 716 aaPredicted RBP4.76□□□□□ -1.65
VPS13B-207ENST00000518569 RGMAQ96B86 450 aa4.76□□□□□ -1.65
VPS13B-207ENST00000518569 RUNDC1Q96C34 613 aa4.76□□□□□ -1.65
VPS13B-207ENST00000518569 C8orf48Q96LL4 319 aa4.76□□□□□ -1.65
VPS13B-207ENST00000518569 PCGF6Q9BYE7 350 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms