RNA–Protein interactions for RNA: ENST00000513148.1

HMGCL-209, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,011 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-209ENST00000513148 NOC3LQ8WTT2 800 aaKnown RBP17.96■□□□□ 0.47
HMGCL-209ENST00000513148 SLC28A3Q9HAS3 691 aa17.96■□□□□ 0.47
HMGCL-209ENST00000513148 NLRC5Q86WI3 1866 aa17.95■□□□□ 0.46
HMGCL-209ENST00000513148 ARL5CA6NH57 179 aa17.95■□□□□ 0.46
HMGCL-209ENST00000513148 ADSSP30520 456 aa17.95■□□□□ 0.46
HMGCL-209ENST00000513148 ZBTB41Q5SVQ8 909 aa17.95■□□□□ 0.46
HMGCL-209ENST00000513148 FIBCD1Q8N539 461 aa17.95■□□□□ 0.46
HMGCL-209ENST00000513148 FAM200AQ8TCP9 573 aa17.95■□□□□ 0.46
HMGCL-209ENST00000513148 GBP3Q9H0R5 595 aa17.95■□□□□ 0.46
HMGCL-209ENST00000513148 CERS4Q9HA82 394 aa17.95■□□□□ 0.46
HMGCL-209ENST00000513148 MAN1B1Q9UKM7 699 aa17.95■□□□□ 0.46
HMGCL-209ENST00000513148 TDRD15B5MCY1 1934 aaKnown RBP17.95■□□□□ 0.46
HMGCL-209ENST00000513148 A0A0B4J269 797 aa17.94■□□□□ 0.46
HMGCL-209ENST00000513148 LINC01553A4QN01 128 aa17.94■□□□□ 0.46
HMGCL-209ENST00000513148 TULP1O00294 542 aaPredicted RBP17.94■□□□□ 0.46
HMGCL-209ENST00000513148 POMCP01189 267 aa17.94■□□□□ 0.46
HMGCL-209ENST00000513148 TNFSF9P41273 254 aa17.94■□□□□ 0.46
HMGCL-209ENST00000513148 GRM5P41594 1212 aa17.94■□□□□ 0.46
HMGCL-209ENST00000513148 KNOP1Q1ED39 458 aaKnown RBP17.94■□□□□ 0.46
HMGCL-209ENST00000513148 BMT2Q1RMZ1 405 aa17.94■□□□□ 0.46
HMGCL-209ENST00000513148 NOMO2Q5JPE7 1267 aa17.94■□□□□ 0.46
HMGCL-209ENST00000513148 SPOUT1Q5T280 376 aaKnown RBP17.94■□□□□ 0.46
HMGCL-209ENST00000513148 SLFN12LQ6IEE8 588 aa17.94■□□□□ 0.46
HMGCL-209ENST00000513148 ARMCX5Q6P1M9 558 aa17.94■□□□□ 0.46
HMGCL-209ENST00000513148 CMTR2Q8IYT2 770 aaKnown RBP17.94■□□□□ 0.46
HMGCL-209ENST00000513148 SP7Q8TDD2 431 aaPredicted RBP17.94■□□□□ 0.46
HMGCL-209ENST00000513148 CBWD1Q9BRT8 395 aa17.94■□□□□ 0.46
HMGCL-209ENST00000513148 CXCL16Q9H2A7 254 aa17.94■□□□□ 0.46
HMGCL-209ENST00000513148 PCIF1Q9H4Z3 704 aa17.94■□□□□ 0.46
HMGCL-209ENST00000513148 MRPL42Q9Y6G3 142 aaKnown RBP17.94■□□□□ 0.46
HMGCL-209ENST00000513148 CITO14578 2027 aa17.94■□□□□ 0.46
HMGCL-209ENST00000513148 TNNT1P13805 278 aa17.94■□□□□ 0.46
HMGCL-209ENST00000513148 SCNN1GP51170 649 aa17.94■□□□□ 0.46
HMGCL-209ENST00000513148 YARSP54577 528 aaKnown RBP17.94■□□□□ 0.46
HMGCL-209ENST00000513148 ZNF658Q5TYW1 1059 aaPredicted RBP17.94■□□□□ 0.46
HMGCL-209ENST00000513148 LRRC43Q8N309 656 aa17.94■□□□□ 0.46
HMGCL-209ENST00000513148 URGCPQ8TCY9 931 aa17.94■□□□□ 0.46
HMGCL-209ENST00000513148 SAAL1Q96ER3 474 aa17.94■□□□□ 0.46
HMGCL-209ENST00000513148 RPS6KC1Q96S38 1066 aa17.94■□□□□ 0.46
HMGCL-209ENST00000513148 UBN1Q9NPG3 1134 aa17.94■□□□□ 0.46
HMGCL-209ENST00000513148 TYW1Q9NV66 732 aaKnown RBP17.94■□□□□ 0.46
HMGCL-209ENST00000513148 AGO2Q9UKV8 859 aaKnown RBP17.94■□□□□ 0.46
HMGCL-209ENST00000513148 GIT1Q9Y2X7 761 aa17.94■□□□□ 0.46
HMGCL-209ENST00000513148 TRIP11Q15643 1979 aa17.94■□□□□ 0.46
HMGCL-209ENST00000513148 CLIC2O15247 247 aa17.93■□□□□ 0.46
HMGCL-209ENST00000513148 OGTO15294 1046 aa17.93■□□□□ 0.46
HMGCL-209ENST00000513148 TGFB1I1O43294 461 aa17.93■□□□□ 0.46
HMGCL-209ENST00000513148 AP5Z1O43299 807 aa17.93■□□□□ 0.46
HMGCL-209ENST00000513148 ACOT2P49753 483 aa17.93■□□□□ 0.46
HMGCL-209ENST00000513148 TAP1Q03518 808 aa17.93■□□□□ 0.46
HMGCL-209ENST00000513148 RNASELQ05823 741 aaKnown RBP17.93■□□□□ 0.46
HMGCL-209ENST00000513148 LRRC55Q6ZSA7 311 aa17.93■□□□□ 0.46
HMGCL-209ENST00000513148 ZSWIM2Q8NEG5 633 aa17.93■□□□□ 0.46
HMGCL-209ENST00000513148 ACAP3Q96P50 834 aa17.93■□□□□ 0.46
HMGCL-209ENST00000513148 KCND1Q9NSA2 647 aa17.93■□□□□ 0.46
HMGCL-209ENST00000513148 KIAA1468Q9P260 1216 aa17.93■□□□□ 0.46
HMGCL-209ENST00000513148 CXCL8P10145 99 aa17.93■□□□□ 0.46
HMGCL-209ENST00000513148 GLRA4Q5JXX5 417 aa17.93■□□□□ 0.46
HMGCL-209ENST00000513148 HS2ST1Q7LGA3 356 aa17.93■□□□□ 0.46
HMGCL-209ENST00000513148 FAM161BQ96MY7 647 aa17.93■□□□□ 0.46
HMGCL-209ENST00000513148 C17orf80Q9BSJ5 609 aa17.93■□□□□ 0.46
HMGCL-209ENST00000513148 MRPL9Q9BYD2 267 aaKnown RBP17.93■□□□□ 0.46
HMGCL-209ENST00000513148 AGPAT3Q9NRZ7 376 aa17.93■□□□□ 0.46
HMGCL-209ENST00000513148 TOPORSQ9NS56 1045 aaPredicted RBP17.93■□□□□ 0.46
HMGCL-209ENST00000513148 TBC1D13Q9NVG8 400 aa17.93■□□□□ 0.46
HMGCL-209ENST00000513148 MIOSQ9NXC5 875 aa17.93■□□□□ 0.46
HMGCL-209ENST00000513148 STYXL1Q9Y6J8 313 aa17.93■□□□□ 0.46
HMGCL-209ENST00000513148 GOLGA8IPA6NC78 632 aa17.92■□□□□ 0.46
HMGCL-209ENST00000513148 GOLGA8JA6NMD2 632 aa17.92■□□□□ 0.46
HMGCL-209ENST00000513148 FAM189A1O60320 539 aa17.92■□□□□ 0.46
HMGCL-209ENST00000513148 CAVIN2O95810 425 aa17.92■□□□□ 0.46
HMGCL-209ENST00000513148 CDC25BP30305 580 aa17.92■□□□□ 0.46
HMGCL-209ENST00000513148 PBX3P40426 434 aa17.92■□□□□ 0.46
HMGCL-209ENST00000513148 FAM213AQ9BRX8 229 aa17.92■□□□□ 0.46
HMGCL-209ENST00000513148 PLAGL2Q9UPG8 496 aa17.92■□□□□ 0.46
HMGCL-209ENST00000513148 RALGAPA2Q2PPJ7 1873 aa17.91■□□□□ 0.46
HMGCL-209ENST00000513148 ZC3H11AO75152 810 aaKnown RBP eCLIP17.91■□□□□ 0.46
HMGCL-209ENST00000513148 PRCPP42785 496 aa17.91■□□□□ 0.46
HMGCL-209ENST00000513148 FXR1P51114 621 aaKnown RBP eCLIP17.91■□□□□ 0.46
HMGCL-209ENST00000513148 CYP2J2P51589 502 aa17.91■□□□□ 0.46
HMGCL-209ENST00000513148 GSTCDQ8NEC7 633 aa17.91■□□□□ 0.46
HMGCL-209ENST00000513148 FAM212AQ96EL1 285 aa17.91■□□□□ 0.46
HMGCL-209ENST00000513148 KCTD10Q9H3F6 313 aa17.91■□□□□ 0.46
HMGCL-209ENST00000513148 ZNF576Q9H609 170 aa17.91■□□□□ 0.46
HMGCL-209ENST00000513148 BMP6P22004 513 aa17.91■□□□□ 0.46
HMGCL-209ENST00000513148 GARTP22102 1010 aa17.91■□□□□ 0.46
HMGCL-209ENST00000513148 ZNF697Q5TEC3 545 aa17.91■□□□□ 0.46
HMGCL-209ENST00000513148 ZNF280BQ86YH2 543 aa17.91■□□□□ 0.46
HMGCL-209ENST00000513148 GUF1Q8N442 669 aaKnown RBP17.91■□□□□ 0.46
HMGCL-209ENST00000513148 ARNTL2Q8WYA1 636 aa17.91■□□□□ 0.46
HMGCL-209ENST00000513148 SNX27Q96L92 541 aa17.91■□□□□ 0.46
HMGCL-209ENST00000513148 CWH43Q9H720 699 aa17.91■□□□□ 0.46
HMGCL-209ENST00000513148 HSPBP1Q9NZL4 362 aa17.91■□□□□ 0.46
HMGCL-209ENST00000513148 KIF2AO00139 706 aaPredicted RBP17.9■□□□□ 0.46
HMGCL-209ENST00000513148 PTGESO14684 152 aa17.9■□□□□ 0.46
HMGCL-209ENST00000513148 MEFVO15553 781 aaPredicted RBP17.9■□□□□ 0.46
HMGCL-209ENST00000513148 B4GALT3O60512 393 aa17.9■□□□□ 0.46
HMGCL-209ENST00000513148 CLTAP09496 248 aa17.9■□□□□ 0.46
HMGCL-209ENST00000513148 LINC00271P0C7V0 271 aa17.9■□□□□ 0.46
HMGCL-209ENST00000513148 CTNNB1P35222 781 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms