RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 NARSO43776 548 aaKnown RBP13.85□□□□□ -0.19
VEGFA-216ENST00000512683 MED24O75448 989 aa13.85□□□□□ -0.19
VEGFA-216ENST00000512683 PRKCBP05771 671 aa13.85□□□□□ -0.19
VEGFA-216ENST00000512683 MCM7P33993 719 aa13.85□□□□□ -0.19
VEGFA-216ENST00000512683 MAGEA9P43362 315 aa13.85□□□□□ -0.19
VEGFA-216ENST00000512683 PRKCQQ04759 706 aa13.85□□□□□ -0.19
VEGFA-216ENST00000512683 NAB2Q15742 525 aa13.85□□□□□ -0.19
VEGFA-216ENST00000512683 PSMD5Q16401 504 aa13.85□□□□□ -0.19
VEGFA-216ENST00000512683 TMEM132AQ24JP5 1023 aa13.85□□□□□ -0.19
VEGFA-216ENST00000512683 PPM1LQ5SGD2 360 aa13.85□□□□□ -0.19
VEGFA-216ENST00000512683 CDR2LQ86X02 465 aaPredicted RBP13.85□□□□□ -0.19
VEGFA-216ENST00000512683 ADSSL1Q8N142 457 aa13.85□□□□□ -0.19
VEGFA-216ENST00000512683 KCTD17Q8N5Z5 321 aa13.85□□□□□ -0.19
VEGFA-216ENST00000512683 DDX27Q96GQ7 796 aaKnown RBP13.85□□□□□ -0.19
VEGFA-216ENST00000512683 NELL2Q99435 816 aa13.85□□□□□ -0.19
VEGFA-216ENST00000512683 CCDC113Q9H0I3 377 aa13.85□□□□□ -0.19
VEGFA-216ENST00000512683 TMEM60Q9H2L4 133 aa13.85□□□□□ -0.19
VEGFA-216ENST00000512683 TBC1D17Q9HA65 648 aa13.85□□□□□ -0.19
VEGFA-216ENST00000512683 GPRC5CQ9NQ84 441 aa13.85□□□□□ -0.19
VEGFA-216ENST00000512683 AVENQ9NQS1 362 aaPredicted RBP13.85□□□□□ -0.19
VEGFA-216ENST00000512683 ARHGEF3Q9NR81 526 aa13.85□□□□□ -0.19
VEGFA-216ENST00000512683 SNTG2Q9NY99 539 aa13.85□□□□□ -0.19
VEGFA-216ENST00000512683 USP34Q70CQ2 3546 aa13.85□□□□□ -0.19
VEGFA-216ENST00000512683 MYO10Q9HD67 2058 aa13.84□□□□□ -0.19
VEGFA-216ENST00000512683 POTEMA6NI47 508 aa13.84□□□□□ -0.19
VEGFA-216ENST00000512683 RECQL4O94761 1208 aa13.84□□□□□ -0.19
VEGFA-216ENST00000512683 LMNAP02545 664 aaKnown RBP13.84□□□□□ -0.19
VEGFA-216ENST00000512683 C8AP07357 584 aa13.84□□□□□ -0.19
VEGFA-216ENST00000512683 OR52Z1P0C646 297 aa13.84□□□□□ -0.19
VEGFA-216ENST00000512683 FGFR3P22607 806 aa13.84□□□□□ -0.19
VEGFA-216ENST00000512683 FXR2P51116 673 aaKnown RBP eCLIP13.84□□□□□ -0.19
VEGFA-216ENST00000512683 ANKS3Q6ZW76 656 aa13.84□□□□□ -0.19
VEGFA-216ENST00000512683 MAEAQ7L5Y9 396 aa13.84□□□□□ -0.19
VEGFA-216ENST00000512683 CEP57Q86XR8 500 aa13.84□□□□□ -0.19
VEGFA-216ENST00000512683 C1orf210Q8IVY1 113 aa13.84□□□□□ -0.19
VEGFA-216ENST00000512683 GPR152Q8TDT2 470 aa13.84□□□□□ -0.19
VEGFA-216ENST00000512683 B3GALT6Q96L58 329 aa13.84□□□□□ -0.19
VEGFA-216ENST00000512683 ZSCAN31Q96LW9 406 aaPredicted RBP13.84□□□□□ -0.19
VEGFA-216ENST00000512683 RAB34Q9BZG1 259 aa13.84□□□□□ -0.19
VEGFA-216ENST00000512683 C17orf75Q9HAS0 396 aa13.84□□□□□ -0.19
VEGFA-216ENST00000512683 DLGAP2Q9P1A6 1054 aa13.84□□□□□ -0.19
VEGFA-216ENST00000512683 MAFFQ9ULX9 164 aa13.84□□□□□ -0.19
VEGFA-216ENST00000512683 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.84□□□□□ -0.19
VEGFA-216ENST00000512683 NUMBLQ9Y6R0 609 aa13.84□□□□□ -0.19
VEGFA-216ENST00000512683 GVINP1Q7Z2Y8 2422 aa13.83□□□□□ -0.19
VEGFA-216ENST00000512683 CASTOR2A6NHX0 329 aa13.83□□□□□ -0.2
VEGFA-216ENST00000512683 K7ERI5 159 aa13.83□□□□□ -0.2
VEGFA-216ENST00000512683 B3GAT3O94766 335 aa13.83□□□□□ -0.2
VEGFA-216ENST00000512683 KIF4AO95239 1232 aa13.83□□□□□ -0.2
VEGFA-216ENST00000512683 RPL17P18621 184 aaKnown RBP13.83□□□□□ -0.2
VEGFA-216ENST00000512683 HMGN5P82970 282 aaKnown RBP13.83□□□□□ -0.2
VEGFA-216ENST00000512683 XKR4Q5GH76 650 aa13.83□□□□□ -0.2
VEGFA-216ENST00000512683 PRSS55Q6UWB4 352 aaPredicted RBP13.83□□□□□ -0.2
VEGFA-216ENST00000512683 GET4Q7L5D6 327 aaPredicted RBP13.83□□□□□ -0.2
VEGFA-216ENST00000512683 GRASPQ7Z6J2 395 aaPredicted RBP13.83□□□□□ -0.2
VEGFA-216ENST00000512683 FBXO18Q8NFZ0 1043 aa13.83□□□□□ -0.2
VEGFA-216ENST00000512683 FGF13Q92913 245 aa13.83□□□□□ -0.2
VEGFA-216ENST00000512683 C8orf76Q96K31 380 aa13.83□□□□□ -0.2
VEGFA-216ENST00000512683 PAAF1Q9BRP4 392 aa13.83□□□□□ -0.2
VEGFA-216ENST00000512683 TMEM134Q9H6X4 195 aa13.83□□□□□ -0.2
VEGFA-216ENST00000512683 TOPORSQ9NS56 1045 aaPredicted RBP13.83□□□□□ -0.2
VEGFA-216ENST00000512683 SLC38A7Q9NVC3 462 aa13.83□□□□□ -0.2
VEGFA-216ENST00000512683 GDE1Q9NZC3 331 aa13.83□□□□□ -0.2
VEGFA-216ENST00000512683 MTRRQ9UBK8 725 aa13.83□□□□□ -0.2
VEGFA-216ENST00000512683 CA14Q9ULX7 337 aa13.83□□□□□ -0.2
VEGFA-216ENST00000512683 TNFSF13BQ9Y275 285 aa13.83□□□□□ -0.2
VEGFA-216ENST00000512683 RBM19Q9Y4C8 960 aaKnown RBP13.83□□□□□ -0.2
VEGFA-216ENST00000512683 KMT2EQ8IZD2 1858 aa13.82□□□□□ -0.2
VEGFA-216ENST00000512683 A0A087WWV3 80 aa13.82□□□□□ -0.2
VEGFA-216ENST00000512683 MICAL2O94851 1124 aa13.82□□□□□ -0.2
VEGFA-216ENST00000512683 OR1D2P34982 312 aa13.82□□□□□ -0.2
VEGFA-216ENST00000512683 YARSP54577 528 aaKnown RBP13.82□□□□□ -0.2
VEGFA-216ENST00000512683 GPC5P78333 572 aa13.82□□□□□ -0.2
VEGFA-216ENST00000512683 ZNF174Q15697 407 aa13.82□□□□□ -0.2
VEGFA-216ENST00000512683 UPP1Q16831 310 aa13.82□□□□□ -0.2
VEGFA-216ENST00000512683 ZNF528Q3MIS6 628 aa13.82□□□□□ -0.2
VEGFA-216ENST00000512683 AXDND1Q5T1B0 1012 aaPredicted RBP13.82□□□□□ -0.2
VEGFA-216ENST00000512683 ATF7IP2Q5U623 682 aa13.82□□□□□ -0.2
VEGFA-216ENST00000512683 POTEGQ6S5H5 508 aa13.82□□□□□ -0.2
VEGFA-216ENST00000512683 NOSTRINQ8IVI9 506 aa13.82□□□□□ -0.2
VEGFA-216ENST00000512683 GLYCTKQ8IVS8 523 aa13.82□□□□□ -0.2
VEGFA-216ENST00000512683 ZNF461Q8TAF7 563 aa13.82□□□□□ -0.2
VEGFA-216ENST00000512683 PPP1R10Q96QC0 940 aaKnown RBP13.82□□□□□ -0.2
VEGFA-216ENST00000512683 DDX23Q9BUQ8 820 aaKnown RBP13.82□□□□□ -0.2
VEGFA-216ENST00000512683 SH2B1Q9NRF2 756 aaPredicted RBP13.82□□□□□ -0.2
VEGFA-216ENST00000512683 LRWD1Q9UFC0 647 aa13.82□□□□□ -0.2
VEGFA-216ENST00000512683 NOL7Q9UMY1 257 aaKnown RBP13.82□□□□□ -0.2
VEGFA-216ENST00000512683 TDRD15B5MCY1 1934 aaKnown RBP13.82□□□□□ -0.2
VEGFA-216ENST00000512683 KANSL1LA0AUZ9 987 aa13.81□□□□□ -0.2
VEGFA-216ENST00000512683 LAD1O00515 517 aa13.81□□□□□ -0.2
VEGFA-216ENST00000512683 NCAM2O15394 837 aa13.81□□□□□ -0.2
VEGFA-216ENST00000512683 MYBP10242 640 aa13.81□□□□□ -0.2
VEGFA-216ENST00000512683 RPL9P32969 192 aaKnown RBP13.81□□□□□ -0.2
VEGFA-216ENST00000512683 GRM5P41594 1212 aa13.81□□□□□ -0.2
VEGFA-216ENST00000512683 ID4P47928 161 aa13.81□□□□□ -0.2
VEGFA-216ENST00000512683 SLC44A4Q53GD3 710 aa13.81□□□□□ -0.2
VEGFA-216ENST00000512683 SLC8B1Q6J4K2 584 aa13.81□□□□□ -0.2
VEGFA-216ENST00000512683 PARM1Q6UWI2 310 aa13.81□□□□□ -0.2
VEGFA-216ENST00000512683 ALKAL1Q6UXT8 129 aa13.81□□□□□ -0.2
VEGFA-216ENST00000512683 PJA1Q8NG27 643 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms