RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 LONP2Q86WA8 852 aa12.88□□□□□ -0.35
RNF4-216ENST00000511859 CEP57Q86XR8 500 aa12.88□□□□□ -0.35
RNF4-216ENST00000511859 FAM3CQ92520 227 aa12.88□□□□□ -0.35
RNF4-216ENST00000511859 CEP170P1Q96L14 293 aa12.88□□□□□ -0.35
RNF4-216ENST00000511859 TRMT61BQ9BVS5 477 aaKnown RBP12.88□□□□□ -0.35
RNF4-216ENST00000511859 APOL6Q9BWW8 343 aa12.88□□□□□ -0.35
RNF4-216ENST00000511859 C22orf23Q9BZE7 217 aa12.88□□□□□ -0.35
RNF4-216ENST00000511859 BRD9Q9H8M2 597 aa12.88□□□□□ -0.35
RNF4-216ENST00000511859 HCFC1R1Q9NWW0 138 aa12.88□□□□□ -0.35
RNF4-216ENST00000511859 CYP3A7-CYP3A51PA0A087WV96 503 aa12.87□□□□□ -0.35
RNF4-216ENST00000511859 PTPN2P17706 415 aa12.87□□□□□ -0.35
RNF4-216ENST00000511859 CYP3A7P24462 503 aa12.87□□□□□ -0.35
RNF4-216ENST00000511859 MLLT6P55198 1093 aaPredicted RBP12.87□□□□□ -0.35
RNF4-216ENST00000511859 PTENP60484 403 aa12.87□□□□□ -0.35
RNF4-216ENST00000511859 MXD4Q14582 209 aaPredicted RBP12.87□□□□□ -0.35
RNF4-216ENST00000511859 AASDHQ4L235 1098 aaPredicted RBP12.87□□□□□ -0.35
RNF4-216ENST00000511859 RNF20Q5VTR2 975 aa12.87□□□□□ -0.35
RNF4-216ENST00000511859 SPEM1Q8N4L4 309 aa12.87□□□□□ -0.35
RNF4-216ENST00000511859 CCDC148Q8NFR7 591 aa12.87□□□□□ -0.35
RNF4-216ENST00000511859 ING5Q8WYH8 240 aa12.87□□□□□ -0.35
RNF4-216ENST00000511859 RABGGTAQ92696 567 aa12.87□□□□□ -0.35
RNF4-216ENST00000511859 CPB2Q96IY4 423 aa12.87□□□□□ -0.35
RNF4-216ENST00000511859 ZFP14Q9HCL3 533 aa12.87□□□□□ -0.35
RNF4-216ENST00000511859 IGF2RP11717 2491 aa12.87□□□□□ -0.35
RNF4-216ENST00000511859 VWA8A3KMH1 1905 aa12.87□□□□□ -0.35
RNF4-216ENST00000511859 WDFY3Q8IZQ1 3526 aa12.86□□□□□ -0.35
RNF4-216ENST00000511859 KLF18A0A0U1RQI7 1052 aa12.86□□□□□ -0.35
RNF4-216ENST00000511859 INO80B-WBP1J3KQ70 363 aa12.86□□□□□ -0.35
RNF4-216ENST00000511859 PAPSS2O95340 614 aaPredicted RBP12.86□□□□□ -0.35
RNF4-216ENST00000511859 RHOP08100 348 aa12.86□□□□□ -0.35
RNF4-216ENST00000511859 ZNF806P0C7X5 589 aa12.86□□□□□ -0.35
RNF4-216ENST00000511859 CHRNB1P11230 501 aa12.86□□□□□ -0.35
RNF4-216ENST00000511859 AKAP5P24588 427 aa12.86□□□□□ -0.35
RNF4-216ENST00000511859 OR1D2P34982 312 aa12.86□□□□□ -0.35
RNF4-216ENST00000511859 SATB1Q01826 763 aa12.86□□□□□ -0.35
RNF4-216ENST00000511859 AKAP17AQ02040 695 aaKnown RBP12.86□□□□□ -0.35
RNF4-216ENST00000511859 TUSC3Q13454 348 aa12.86□□□□□ -0.35
RNF4-216ENST00000511859 C1orf228Q6PIY5 440 aa12.86□□□□□ -0.35
RNF4-216ENST00000511859 OTUD6AQ7L8S5 288 aa12.86□□□□□ -0.35
RNF4-216ENST00000511859 IFNLR1Q8IU57 520 aaPredicted RBP12.86□□□□□ -0.35
RNF4-216ENST00000511859 MAP4K3Q8IVH8 894 aa12.86□□□□□ -0.35
RNF4-216ENST00000511859 C12orf50Q8NA57 414 aaPredicted RBP12.86□□□□□ -0.35
RNF4-216ENST00000511859 ZNF579Q8NAF0 562 aaKnown RBP12.86□□□□□ -0.35
RNF4-216ENST00000511859 LOXL4Q96JB6 756 aa12.86□□□□□ -0.35
RNF4-216ENST00000511859 ZNF334Q9HCZ1 680 aaPredicted RBP12.86□□□□□ -0.35
RNF4-216ENST00000511859 PARP2Q9UGN5 583 aa12.86□□□□□ -0.35
RNF4-216ENST00000511859 CHURC1-FNTBB4DL54 471 aa12.85□□□□□ -0.35
RNF4-216ENST00000511859 ADAM12O43184 909 aa12.85□□□□□ -0.35
RNF4-216ENST00000511859 MICAL2O94851 1124 aa12.85□□□□□ -0.35
RNF4-216ENST00000511859 P4HBP07237 508 aaKnown RBP12.85□□□□□ -0.35
RNF4-216ENST00000511859 ARF4P18085 180 aaPredicted RBP12.85□□□□□ -0.35
RNF4-216ENST00000511859 FNTBP49356 437 aa12.85□□□□□ -0.35
RNF4-216ENST00000511859 SPIRE1Q08AE8 756 aa12.85□□□□□ -0.35
RNF4-216ENST00000511859 TFDP1Q14186 410 aa12.85□□□□□ -0.35
RNF4-216ENST00000511859 SLC27A1Q6PCB7 646 aa12.85□□□□□ -0.35
RNF4-216ENST00000511859 MOXD1Q6UVY6 613 aa12.85□□□□□ -0.35
RNF4-216ENST00000511859 FAM160A2Q8N612 972 aaPredicted RBP12.85□□□□□ -0.35
RNF4-216ENST00000511859 KDF1Q8NAX2 398 aaPredicted RBP12.85□□□□□ -0.35
RNF4-216ENST00000511859 TBCKQ8TEA7 893 aa12.85□□□□□ -0.35
RNF4-216ENST00000511859 PAAF1Q9BRP4 392 aa12.85□□□□□ -0.35
RNF4-216ENST00000511859 LSM14BQ9BX40 385 aaKnown RBP12.85□□□□□ -0.35
RNF4-216ENST00000511859 NXF3Q9H4D5 531 aaKnown RBP12.85□□□□□ -0.35
RNF4-216ENST00000511859 ZMIZ1Q9ULJ6 1067 aa12.85□□□□□ -0.35
RNF4-216ENST00000511859 A0A1B0GUA9 196 aa12.84□□□□□ -0.35
RNF4-216ENST00000511859 ZNF197O14709 1029 aa12.84□□□□□ -0.35
RNF4-216ENST00000511859 KCNK5O95279 499 aa12.84□□□□□ -0.35
RNF4-216ENST00000511859 HOXB3P14651 431 aaPredicted RBP12.84□□□□□ -0.35
RNF4-216ENST00000511859 PSMC3P17980 439 aa12.84□□□□□ -0.35
RNF4-216ENST00000511859 HOXA6P31267 233 aa12.84□□□□□ -0.35
RNF4-216ENST00000511859 PPP2R5CQ13362 524 aa12.84□□□□□ -0.35
RNF4-216ENST00000511859 LRRC32Q14392 662 aa12.84□□□□□ -0.35
RNF4-216ENST00000511859 GRM2Q14416 872 aa12.84□□□□□ -0.35
RNF4-216ENST00000511859 EMC2Q15006 297 aa12.84□□□□□ -0.35
RNF4-216ENST00000511859 SLC5A9Q2M3M2 681 aa12.84□□□□□ -0.35
RNF4-216ENST00000511859 STPG1Q5TH74 334 aa12.84□□□□□ -0.35
RNF4-216ENST00000511859 POTEHQ6S545 545 aa12.84□□□□□ -0.35
RNF4-216ENST00000511859 UNQ6494/PRO21346Q6UXR6 183 aa12.84□□□□□ -0.35
RNF4-216ENST00000511859 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.84□□□□□ -0.35
RNF4-216ENST00000511859 CEP68Q76N32 757 aa12.84□□□□□ -0.35
RNF4-216ENST00000511859 C4orf19Q8IY42 314 aa12.84□□□□□ -0.35
RNF4-216ENST00000511859 ETNPPLQ8TBG4 499 aa12.84□□□□□ -0.35
RNF4-216ENST00000511859 HASPINQ8TF76 798 aa12.84□□□□□ -0.35
RNF4-216ENST00000511859 MSANTD3Q96H12 275 aa12.84□□□□□ -0.35
RNF4-216ENST00000511859 TCEANC2Q96MN5 208 aa12.84□□□□□ -0.35
RNF4-216ENST00000511859 MTRQ99707 1265 aa12.84□□□□□ -0.35
RNF4-216ENST00000511859 NFKBIZQ9BYH8 718 aa12.84□□□□□ -0.35
RNF4-216ENST00000511859 KLK14Q9P0G3 267 aa12.84□□□□□ -0.35
RNF4-216ENST00000511859 NAP1L2Q9ULW6 460 aaPredicted RBP12.84□□□□□ -0.35
RNF4-216ENST00000511859 PIAS3Q9Y6X2 628 aa12.84□□□□□ -0.35
RNF4-216ENST00000511859 TICRRQ7Z2Z1 1910 aa12.84□□□□□ -0.35
RNF4-216ENST00000511859 DMXL2Q8TDJ6 3036 aa12.84□□□□□ -0.35
RNF4-216ENST00000511859 ARHGEF37A1IGU5 675 aa12.83□□□□□ -0.36
RNF4-216ENST00000511859 K7ESF4 209 aa12.83□□□□□ -0.36
RNF4-216ENST00000511859 EML1O00423 815 aa12.83□□□□□ -0.36
RNF4-216ENST00000511859 KIF4AO95239 1232 aa12.83□□□□□ -0.36
RNF4-216ENST00000511859 THP07101 528 aa12.83□□□□□ -0.36
RNF4-216ENST00000511859 FCARP24071 287 aa12.83□□□□□ -0.36
RNF4-216ENST00000511859 GDI1P31150 447 aa12.83□□□□□ -0.36
RNF4-216ENST00000511859 YWHABP31946 246 aaKnown RBP12.83□□□□□ -0.36
RNF4-216ENST00000511859 SRSF5Q13243 272 aaKnown RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms