RNA–Protein interactions for RNA: ENST00000509828.1

MBD4-208, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 2

Gene MBD4, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-208ENST00000509828 FAM126AQ9BYI3 521 aaPredicted RBP11.46□□□□□ -0.57
MBD4-208ENST00000509828 POLR3FQ9H1D9 316 aaPredicted RBP11.46□□□□□ -0.57
MBD4-208ENST00000509828 EPC1Q9H2F5 836 aa11.46□□□□□ -0.57
MBD4-208ENST00000509828 BRD9Q9H8M2 597 aa11.46□□□□□ -0.57
MBD4-208ENST00000509828 KCNMB3Q9NPA1 279 aa11.46□□□□□ -0.57
MBD4-208ENST00000509828 HCFC1R1Q9NWW0 138 aa11.46□□□□□ -0.57
MBD4-208ENST00000509828 NCOR2Q9Y618 2525 aa11.45□□□□□ -0.58
MBD4-208ENST00000509828 A0A1B0GUA9 196 aa11.45□□□□□ -0.58
MBD4-208ENST00000509828 MAN2B1O00754 1011 aa11.45□□□□□ -0.58
MBD4-208ENST00000509828 PRRG1O14668 218 aa11.45□□□□□ -0.58
MBD4-208ENST00000509828 N4BP3O15049 544 aa11.45□□□□□ -0.58
MBD4-208ENST00000509828 TRAPPC3O43617 180 aa11.45□□□□□ -0.58
MBD4-208ENST00000509828 ECI2O75521 394 aa11.45□□□□□ -0.58
MBD4-208ENST00000509828 CDKL5O76039 1030 aa11.45□□□□□ -0.58
MBD4-208ENST00000509828 KIF4AO95239 1232 aa11.45□□□□□ -0.58
MBD4-208ENST00000509828 LRG1P02750 347 aa11.45□□□□□ -0.58
MBD4-208ENST00000509828 PTPN2P17706 415 aa11.45□□□□□ -0.58
MBD4-208ENST00000509828 TARSP26639 723 aaKnown RBP11.45□□□□□ -0.58
MBD4-208ENST00000509828 ARL2P36404 184 aa11.45□□□□□ -0.58
MBD4-208ENST00000509828 RPS9P46781 194 aaKnown RBP11.45□□□□□ -0.58
MBD4-208ENST00000509828 SPEM2Q0P670 501 aa11.45□□□□□ -0.58
MBD4-208ENST00000509828 RAB33AQ14088 237 aa11.45□□□□□ -0.58
MBD4-208ENST00000509828 IFNLR1Q8IU57 520 aaPredicted RBP11.45□□□□□ -0.58
MBD4-208ENST00000509828 NPAS3Q8IXF0 933 aa11.45□□□□□ -0.58
MBD4-208ENST00000509828 FBXL16Q8N461 479 aa11.45□□□□□ -0.58
MBD4-208ENST00000509828 ZBTB44Q8NCP5 570 aa11.45□□□□□ -0.58
MBD4-208ENST00000509828 GSTCDQ8NEC7 633 aa11.45□□□□□ -0.58
MBD4-208ENST00000509828 AIFM3Q96NN9 605 aa11.45□□□□□ -0.58
MBD4-208ENST00000509828 EIF2AK1Q9BQI3 630 aaKnown RBP11.45□□□□□ -0.58
MBD4-208ENST00000509828 XPNPEP1Q9NQW7 623 aa11.45□□□□□ -0.58
MBD4-208ENST00000509828 HEBP1Q9NRV9 189 aa11.45□□□□□ -0.58
MBD4-208ENST00000509828 ANKEF1Q9NU02 776 aa11.45□□□□□ -0.58
MBD4-208ENST00000509828 PRMT7Q9NVM4 692 aaPredicted RBP11.45□□□□□ -0.58
MBD4-208ENST00000509828 SNTG2Q9NY99 539 aa11.45□□□□□ -0.58
MBD4-208ENST00000509828 GDE1Q9NZC3 331 aa11.45□□□□□ -0.58
MBD4-208ENST00000509828 DNMT3BQ9UBC3 853 aaKnown RBP11.45□□□□□ -0.58
MBD4-208ENST00000509828 PCDHA12Q9UN75 941 aa11.45□□□□□ -0.58
MBD4-208ENST00000509828 CYP46A1Q9Y6A2 500 aa11.45□□□□□ -0.58
MBD4-208ENST00000509828 M0R2N6 131 aa11.44□□□□□ -0.58
MBD4-208ENST00000509828 ADAM12O43184 909 aa11.44□□□□□ -0.58
MBD4-208ENST00000509828 USO1O60763 962 aaKnown RBP11.44□□□□□ -0.58
MBD4-208ENST00000509828 SLITRK3O94933 977 aa11.44□□□□□ -0.58
MBD4-208ENST00000509828 REC8O95072 547 aa11.44□□□□□ -0.58
MBD4-208ENST00000509828 GLRA2P23416 452 aa11.44□□□□□ -0.58
MBD4-208ENST00000509828 ARPP19P56211 112 aa11.44□□□□□ -0.58
MBD4-208ENST00000509828 MTAPQ13126 283 aa11.44□□□□□ -0.58
MBD4-208ENST00000509828 PRPF4BQ13523 1007 aaKnown RBP11.44□□□□□ -0.58
MBD4-208ENST00000509828 AMHR2Q16671 573 aa11.44□□□□□ -0.58
MBD4-208ENST00000509828 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.44□□□□□ -0.58
MBD4-208ENST00000509828 RUFY3Q7L099 469 aa11.44□□□□□ -0.58
MBD4-208ENST00000509828 POTEDQ86YR6 584 aa11.44□□□□□ -0.58
MBD4-208ENST00000509828 CELF5Q8N6W0 485 aaKnown RBP11.44□□□□□ -0.58
MBD4-208ENST00000509828 HAS1Q92839 578 aa11.44□□□□□ -0.58
MBD4-208ENST00000509828 KCNB2Q92953 911 aa11.44□□□□□ -0.58
MBD4-208ENST00000509828 CLDN23Q96B33 292 aa11.44□□□□□ -0.58
MBD4-208ENST00000509828 ZNF274Q96GC6 653 aaPredicted RBP11.44□□□□□ -0.58
MBD4-208ENST00000509828 TRMT61BQ9BVS5 477 aaKnown RBP11.44□□□□□ -0.58
MBD4-208ENST00000509828 AGXT2Q9BYV1 514 aa11.44□□□□□ -0.58
MBD4-208ENST00000509828 ZFP14Q9HCL3 533 aa11.44□□□□□ -0.58
MBD4-208ENST00000509828 BRMS1Q9HCU9 246 aa11.44□□□□□ -0.58
MBD4-208ENST00000509828 GDAQ9Y2T3 454 aa11.44□□□□□ -0.58
MBD4-208ENST00000509828 CDY1Q9Y6F8 540 aa11.44□□□□□ -0.58
MBD4-208ENST00000509828 ZMYM2Q9UBW7 1377 aa11.43□□□□□ -0.58
MBD4-208ENST00000509828 A0A087WWV3 80 aa11.43□□□□□ -0.58
MBD4-208ENST00000509828 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.43□□□□□ -0.58
MBD4-208ENST00000509828 ZNF197O14709 1029 aa11.43□□□□□ -0.58
MBD4-208ENST00000509828 LILRB5O75023 590 aa11.43□□□□□ -0.58
MBD4-208ENST00000509828 B3GAT3O94766 335 aa11.43□□□□□ -0.58
MBD4-208ENST00000509828 RHOP08100 348 aa11.43□□□□□ -0.58
MBD4-208ENST00000509828 ATP2B1P20020 1258 aa11.43□□□□□ -0.58
MBD4-208ENST00000509828 TXKP42681 527 aa11.43□□□□□ -0.58
MBD4-208ENST00000509828 EVCP57679 992 aa11.43□□□□□ -0.58
MBD4-208ENST00000509828 GRM2Q14416 872 aa11.43□□□□□ -0.58
MBD4-208ENST00000509828 PPM1JQ5JR12 505 aa11.43□□□□□ -0.58
MBD4-208ENST00000509828 CYP4A22Q5TCH4 519 aa11.43□□□□□ -0.58
MBD4-208ENST00000509828 LAIR1Q6GTX8 287 aa11.43□□□□□ -0.58
MBD4-208ENST00000509828 TANGO2Q6ICL3 276 aa11.43□□□□□ -0.58
MBD4-208ENST00000509828 ANKS3Q6ZW76 656 aa11.43□□□□□ -0.58
MBD4-208ENST00000509828 RTL10Q7L3V2 364 aa11.43□□□□□ -0.58
MBD4-208ENST00000509828 APBB1IPQ7Z5R6 666 aaPredicted RBP11.43□□□□□ -0.58
MBD4-208ENST00000509828 SKAP1Q86WV1 359 aa11.43□□□□□ -0.58
MBD4-208ENST00000509828 NOSTRINQ8IVI9 506 aa11.43□□□□□ -0.58
MBD4-208ENST00000509828 ELMOD1Q8N336 334 aa11.43□□□□□ -0.58
MBD4-208ENST00000509828 PIGOQ8TEQ8 1089 aa11.43□□□□□ -0.58
MBD4-208ENST00000509828 IRF7Q92985 503 aa11.43□□□□□ -0.58
MBD4-208ENST00000509828 ELSPBP1Q96BH3 223 aa11.43□□□□□ -0.58
MBD4-208ENST00000509828 PRIMPOLQ96LW4 560 aa11.43□□□□□ -0.58
MBD4-208ENST00000509828 CORO1BQ9BR76 489 aa11.43□□□□□ -0.58
MBD4-208ENST00000509828 NFKBIZQ9BYH8 718 aa11.43□□□□□ -0.58
MBD4-208ENST00000509828 PLA2G2FQ9BZM2 168 aa11.43□□□□□ -0.58
MBD4-208ENST00000509828 C2orf40Q9H1Z8 148 aa11.43□□□□□ -0.58
MBD4-208ENST00000509828 LMAN1LQ9HAT1 526 aa11.43□□□□□ -0.58
MBD4-208ENST00000509828 RECQL4O94761 1208 aa11.42□□□□□ -0.58
MBD4-208ENST00000509828 POU2F2P09086 479 aa11.42□□□□□ -0.58
MBD4-208ENST00000509828 CXCL12P48061 93 aa11.42□□□□□ -0.58
MBD4-208ENST00000509828 CCR3P51677 355 aa11.42□□□□□ -0.58
MBD4-208ENST00000509828 SIM2Q14190 667 aaPredicted RBP11.42□□□□□ -0.58
MBD4-208ENST00000509828 CALCRLQ16602 461 aa11.42□□□□□ -0.58
MBD4-208ENST00000509828 MAPK6Q16659 721 aa11.42□□□□□ -0.58
MBD4-208ENST00000509828 IQCEQ6IPM2 695 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms