RNA–Protein interactions for RNA: ENST00000507996.5

KDM3B-204, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 3,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-204ENST00000507996 GEMIN4P57678 1058 aaKnown RBP6.55□□□□□ -1.36
KDM3B-204ENST00000507996 PDE1BQ01064 536 aa6.55□□□□□ -1.36
KDM3B-204ENST00000507996 TTLL12Q14166 644 aaPredicted RBP6.55□□□□□ -1.36
KDM3B-204ENST00000507996 WDR72Q3MJ13 1102 aa6.55□□□□□ -1.36
KDM3B-204ENST00000507996 SPATA24Q86W54 205 aa6.55□□□□□ -1.36
KDM3B-204ENST00000507996 ECHDC2Q86YB7 292 aa6.55□□□□□ -1.36
KDM3B-204ENST00000507996 DIS3L2Q8IYB7 885 aaKnown RBP6.55□□□□□ -1.36
KDM3B-204ENST00000507996 NEK9Q8TD19 979 aa6.55□□□□□ -1.36
KDM3B-204ENST00000507996 DCPSQ96C86 337 aaKnown RBP6.55□□□□□ -1.36
KDM3B-204ENST00000507996 ITPKCQ96DU7 683 aa6.55□□□□□ -1.36
KDM3B-204ENST00000507996 SNX27Q96L92 541 aa6.55□□□□□ -1.36
KDM3B-204ENST00000507996 CGREF1Q99674 301 aa6.55□□□□□ -1.36
KDM3B-204ENST00000507996 HNRNPABQ99729 332 aaKnown RBP6.55□□□□□ -1.36
KDM3B-204ENST00000507996 SELENOSQ9BQE4 189 aa6.55□□□□□ -1.36
KDM3B-204ENST00000507996 TUBGCP2Q9BSJ2 902 aa6.55□□□□□ -1.36
KDM3B-204ENST00000507996 ROPN1BQ9BZX4 212 aaPredicted RBP6.55□□□□□ -1.36
KDM3B-204ENST00000507996 DENND2DQ9H6A0 471 aaPredicted RBP6.55□□□□□ -1.36
KDM3B-204ENST00000507996 ROPN1Q9HAT0 212 aaPredicted RBP6.55□□□□□ -1.36
KDM3B-204ENST00000507996 SUCLA2Q9P2R7 463 aaPredicted RBP6.55□□□□□ -1.36
KDM3B-204ENST00000507996 STX18Q9P2W9 335 aaKnown RBP6.55□□□□□ -1.36
KDM3B-204ENST00000507996 MAGEC2Q9UBF1 373 aaPredicted RBP6.55□□□□□ -1.36
KDM3B-204ENST00000507996 HESX1Q9UBX0 185 aa6.55□□□□□ -1.36
KDM3B-204ENST00000507996 DNAJB4Q9UDY4 337 aa6.55□□□□□ -1.36
KDM3B-204ENST00000507996 HERC5Q9UII4 1024 aaKnown RBP6.55□□□□□ -1.36
KDM3B-204ENST00000507996 INTUQ9ULD6 942 aa6.55□□□□□ -1.36
KDM3B-204ENST00000507996 SBF1O95248 1867 aa6.54□□□□□ -1.36
KDM3B-204ENST00000507996 FOCADQ5VW36 1801 aa6.54□□□□□ -1.36
KDM3B-204ENST00000507996 TESPA1A2RU30 521 aaPredicted RBP6.54□□□□□ -1.36
KDM3B-204ENST00000507996 MAGEB2O15479 319 aa6.54□□□□□ -1.36
KDM3B-204ENST00000507996 PALMO75781 387 aa6.54□□□□□ -1.36
KDM3B-204ENST00000507996 RPN1P04843 607 aaKnown RBP6.54□□□□□ -1.36
KDM3B-204ENST00000507996 PLEKP08567 350 aaPredicted RBP6.54□□□□□ -1.36
KDM3B-204ENST00000507996 ECE1P42892 770 aa6.54□□□□□ -1.36
KDM3B-204ENST00000507996 USP11P51784 963 aa6.54□□□□□ -1.36
KDM3B-204ENST00000507996 MAP3K10Q02779 954 aa6.54□□□□□ -1.36
KDM3B-204ENST00000507996 PPP2R5EQ16537 467 aa6.54□□□□□ -1.36
KDM3B-204ENST00000507996 PDCD4Q53EL6 469 aaKnown RBP6.54□□□□□ -1.36
KDM3B-204ENST00000507996 SLC44A4Q53GD3 710 aa6.54□□□□□ -1.36
KDM3B-204ENST00000507996 CHADLQ6NUI6 762 aa6.54□□□□□ -1.36
KDM3B-204ENST00000507996 TATDN1Q6P1N9 297 aa6.54□□□□□ -1.36
KDM3B-204ENST00000507996 OLFML1Q6UWY5 402 aa6.54□□□□□ -1.36
KDM3B-204ENST00000507996 C4orf50Q6ZRC1 276 aa6.54□□□□□ -1.36
KDM3B-204ENST00000507996 SEPT14Q6ZU15 432 aa6.54□□□□□ -1.36
KDM3B-204ENST00000507996 TMEM179Q6ZVK1 233 aa6.54□□□□□ -1.36
KDM3B-204ENST00000507996 DQX1Q8TE96 717 aaKnown RBP6.54□□□□□ -1.36
KDM3B-204ENST00000507996 AGBL1Q96MI9 1066 aa6.54□□□□□ -1.36
KDM3B-204ENST00000507996 TBC1D10AQ9BXI6 508 aa6.54□□□□□ -1.36
KDM3B-204ENST00000507996 KANSL2Q9H9L4 492 aa6.54□□□□□ -1.36
KDM3B-204ENST00000507996 SAR1AQ9NR31 198 aa6.54□□□□□ -1.36
KDM3B-204ENST00000507996 ADARB2Q9NS39 739 aaKnown RBP6.54□□□□□ -1.36
KDM3B-204ENST00000507996 ZDHHC7Q9NXF8 308 aa6.54□□□□□ -1.36
KDM3B-204ENST00000507996 MAD2L2Q9UI95 211 aa6.54□□□□□ -1.36
KDM3B-204ENST00000507996 ATRNL1Q5VV63 1379 aa6.54□□□□□ -1.36
KDM3B-204ENST00000507996 ADM5C9JUS6 153 aa6.54□□□□□ -1.36
KDM3B-204ENST00000507996 PGRMC1O00264 195 aaKnown RBP6.54□□□□□ -1.36
KDM3B-204ENST00000507996 RGS16O15492 202 aaPredicted RBP6.54□□□□□ -1.36
KDM3B-204ENST00000507996 DEXIO95424 95 aa6.54□□□□□ -1.36
KDM3B-204ENST00000507996 VEGFAP15692 232 aaPredicted RBP6.54□□□□□ -1.36
KDM3B-204ENST00000507996 TXKP42681 527 aa6.54□□□□□ -1.36
KDM3B-204ENST00000507996 SLC1A4P43007 532 aa6.54□□□□□ -1.36
KDM3B-204ENST00000507996 TRPC1P48995 793 aa6.54□□□□□ -1.36
KDM3B-204ENST00000507996 ZNF568Q3ZCX4 644 aa6.54□□□□□ -1.36
KDM3B-204ENST00000507996 MFSD4BQ5TF39 518 aa6.54□□□□□ -1.36
KDM3B-204ENST00000507996 FKBP1CQ5VVH2 108 aa6.54□□□□□ -1.36
KDM3B-204ENST00000507996 HGSNATQ68CP4 663 aa6.54□□□□□ -1.36
KDM3B-204ENST00000507996 TTBK2Q6IQ55 1244 aa6.54□□□□□ -1.36
KDM3B-204ENST00000507996 TMTC3Q6ZXV5 915 aa6.54□□□□□ -1.36
KDM3B-204ENST00000507996 SULF1Q8IWU6 871 aa6.54□□□□□ -1.36
KDM3B-204ENST00000507996 ST13P4Q8IZP2 240 aaPredicted RBP6.54□□□□□ -1.36
KDM3B-204ENST00000507996 DEPTORQ8TB45 409 aa6.54□□□□□ -1.36
KDM3B-204ENST00000507996 BAP1Q92560 729 aa6.54□□□□□ -1.36
KDM3B-204ENST00000507996 GPKOWQ92917 476 aaPredicted RBP eCLIP6.54□□□□□ -1.36
KDM3B-204ENST00000507996 HAUS1Q96CS2 278 aa6.54□□□□□ -1.36
KDM3B-204ENST00000507996 ABHD8Q96I13 439 aa6.54□□□□□ -1.36
KDM3B-204ENST00000507996 EPSTI1Q96J88 318 aa6.54□□□□□ -1.36
KDM3B-204ENST00000507996 MAGEB18Q96M61 343 aa6.54□□□□□ -1.36
KDM3B-204ENST00000507996 PSMB7Q99436 277 aa6.54□□□□□ -1.36
KDM3B-204ENST00000507996 FMO2Q99518 471 aa6.54□□□□□ -1.36
KDM3B-204ENST00000507996 DUSP9Q99956 384 aaKnown RBP6.54□□□□□ -1.36
KDM3B-204ENST00000507996 DDX23Q9BUQ8 820 aaKnown RBP6.54□□□□□ -1.36
KDM3B-204ENST00000507996 ZMYND12Q9H0C1 365 aa6.54□□□□□ -1.36
KDM3B-204ENST00000507996 FGFR1OP2Q9NVK5 253 aa6.54□□□□□ -1.36
KDM3B-204ENST00000507996 KLHL14Q9P2G3 628 aa6.54□□□□□ -1.36
KDM3B-204ENST00000507996 ZNHIT2Q9UHR6 403 aa6.54□□□□□ -1.36
KDM3B-204ENST00000507996 STARD13Q9Y3M8 1113 aa6.54□□□□□ -1.36
KDM3B-204ENST00000507996 BTBD18B2RXH4 712 aa6.53□□□□□ -1.36
KDM3B-204ENST00000507996 TCP11X1B4DZS4 312 aa6.53□□□□□ -1.36
KDM3B-204ENST00000507996 HNRNPCP07910 306 aaKnown RBP eCLIP6.53□□□□□ -1.36
KDM3B-204ENST00000507996 T-ENOLP0DO92 83 aa6.53□□□□□ -1.36
KDM3B-204ENST00000507996 MARK3P27448 753 aa6.53□□□□□ -1.36
KDM3B-204ENST00000507996 PTPN4P29074 926 aa6.53□□□□□ -1.36
KDM3B-204ENST00000507996 EPHX2P34913 555 aa6.53□□□□□ -1.36
KDM3B-204ENST00000507996 PMS2P54278 862 aa6.53□□□□□ -1.36
KDM3B-204ENST00000507996 MTTPP55157 894 aa6.53□□□□□ -1.36
KDM3B-204ENST00000507996 ADARP55265 1226 aaKnown RBP6.53□□□□□ -1.36
KDM3B-204ENST00000507996 KLRC3Q07444 240 aa6.53□□□□□ -1.36
KDM3B-204ENST00000507996 P3H1Q32P28 736 aa6.53□□□□□ -1.36
KDM3B-204ENST00000507996 ZC2HC1CQ53FD0 456 aaPredicted RBP6.53□□□□□ -1.36
KDM3B-204ENST00000507996 CFAP157Q5JU67 520 aa6.53□□□□□ -1.36
KDM3B-204ENST00000507996 SLFN13Q68D06 897 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms