RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 PBX3P40426 434 aa27.38■■□□□ 1.97
LSM6-202ENST00000502781 ALDH7A1P49419 539 aaKnown RBP27.38■■□□□ 1.97
LSM6-202ENST00000502781 KNOP1Q1ED39 458 aaKnown RBP27.38■■□□□ 1.97
LSM6-202ENST00000502781 NELFCDQ8IXH7 590 aa27.38■■□□□ 1.97
LSM6-202ENST00000502781 SLC39A11Q8N1S5 342 aa27.38■■□□□ 1.97
LSM6-202ENST00000502781 ERCC4Q92889 916 aaPredicted RBP27.38■■□□□ 1.97
LSM6-202ENST00000502781 CBWD1Q9BRT8 395 aa27.38■■□□□ 1.97
LSM6-202ENST00000502781 PLEKHA5Q9HAU0 1116 aa27.38■■□□□ 1.97
LSM6-202ENST00000502781 SMIM28A0A1B0GU29 152 aa27.37■■□□□ 1.97
LSM6-202ENST00000502781 THP07101 528 aa27.37■■□□□ 1.97
LSM6-202ENST00000502781 CXCL8P10145 99 aa27.37■■□□□ 1.97
LSM6-202ENST00000502781 KCNE1P15382 129 aa27.37■■□□□ 1.97
LSM6-202ENST00000502781 PPM1AP35813 382 aa27.37■■□□□ 1.97
LSM6-202ENST00000502781 SLC11A1P49279 550 aa27.37■■□□□ 1.97
LSM6-202ENST00000502781 PLCB3Q01970 1234 aa27.37■■□□□ 1.97
LSM6-202ENST00000502781 ENOX2Q16206 610 aaKnown RBP27.37■■□□□ 1.97
LSM6-202ENST00000502781 CRELD2Q6UXH1 353 aaPredicted RBP27.37■■□□□ 1.97
LSM6-202ENST00000502781 SPPL3Q8TCT6 385 aa27.37■■□□□ 1.97
LSM6-202ENST00000502781 SMARCE1Q969G3 411 aa27.37■■□□□ 1.97
LSM6-202ENST00000502781 FAM193BQ96PV7 902 aaPredicted RBP27.37■■□□□ 1.97
LSM6-202ENST00000502781 GAS2L1Q99501 681 aaPredicted RBP27.37■■□□□ 1.97
LSM6-202ENST00000502781 RMND1Q9NWS8 449 aa27.37■■□□□ 1.97
LSM6-202ENST00000502781 KIAA0391O15091 583 aaKnown RBP27.36■■□□□ 1.97
LSM6-202ENST00000502781 FGF18O76093 207 aa27.36■■□□□ 1.97
LSM6-202ENST00000502781 ZMAT2Q96NC0 199 aaKnown RBP27.36■■□□□ 1.97
LSM6-202ENST00000502781 AGPAT3Q9NRZ7 376 aa27.36■■□□□ 1.97
LSM6-202ENST00000502781 SPG21Q9NZD8 308 aa27.36■■□□□ 1.97
LSM6-202ENST00000502781 LMCD1Q9NZU5 365 aa27.36■■□□□ 1.97
LSM6-202ENST00000502781 GOLGA6L22H0YM25 854 aa27.35■■□□□ 1.97
LSM6-202ENST00000502781 GRM6O15303 877 aa27.35■■□□□ 1.97
LSM6-202ENST00000502781 ALDH2P05091 517 aa27.35■■□□□ 1.97
LSM6-202ENST00000502781 ACOT2P49753 483 aa27.35■■□□□ 1.97
LSM6-202ENST00000502781 TUSC3Q13454 348 aa27.35■■□□□ 1.97
LSM6-202ENST00000502781 CAMK1Q14012 370 aa27.35■■□□□ 1.97
LSM6-202ENST00000502781 GLRA4Q5JXX5 417 aa27.35■■□□□ 1.97
LSM6-202ENST00000502781 ARMCX5Q6P1M9 558 aa27.35■■□□□ 1.97
LSM6-202ENST00000502781 TMEM173Q86WV6 379 aaPredicted RBP27.35■■□□□ 1.97
LSM6-202ENST00000502781 C12orf56Q8IXR9 622 aa27.35■■□□□ 1.97
LSM6-202ENST00000502781 ZSWIM2Q8NEG5 633 aa27.35■■□□□ 1.97
LSM6-202ENST00000502781 KCTD10Q9H3F6 313 aa27.35■■□□□ 1.97
LSM6-202ENST00000502781 RPF1Q9H9Y2 349 aaKnown RBP27.35■■□□□ 1.97
LSM6-202ENST00000502781 ALG13Q9NP73 1137 aaKnown RBP27.35■■□□□ 1.97
LSM6-202ENST00000502781 CGNQ9P2M7 1197 aaKnown RBP27.35■■□□□ 1.97
LSM6-202ENST00000502781 LZTS1Q9Y250 596 aa27.35■■□□□ 1.97
LSM6-202ENST00000502781 NT5C1B-RDH14C9J2C7 533 aa27.35■■□□□ 1.97
LSM6-202ENST00000502781 NRP1O14786 923 aa27.35■■□□□ 1.97
LSM6-202ENST00000502781 LDHAP00338 332 aaKnown RBP27.35■■□□□ 1.97
LSM6-202ENST00000502781 UBE3AQ05086 875 aa27.35■■□□□ 1.97
LSM6-202ENST00000502781 GUF1Q8N442 669 aaKnown RBP27.35■■□□□ 1.97
LSM6-202ENST00000502781 TMEM174Q8WUU8 243 aa27.35■■□□□ 1.97
LSM6-202ENST00000502781 IGSF21Q96ID5 467 aa27.35■■□□□ 1.97
LSM6-202ENST00000502781 LMAN2LQ9H0V9 348 aa27.35■■□□□ 1.97
LSM6-202ENST00000502781 COL4A4P53420 1690 aaPredicted RBP27.34■■□□□ 1.97
LSM6-202ENST00000502781 KIF20AO95235 890 aa27.34■■□□□ 1.97
LSM6-202ENST00000502781 COBLL1Q53SF7 1204 aa27.34■■□□□ 1.97
LSM6-202ENST00000502781 ZNF658Q5TYW1 1059 aaPredicted RBP27.34■■□□□ 1.97
LSM6-202ENST00000502781 HS2ST1Q7LGA3 356 aa27.34■■□□□ 1.97
LSM6-202ENST00000502781 BCL7CQ8WUZ0 217 aaPredicted RBP27.34■■□□□ 1.97
LSM6-202ENST00000502781 SAAL1Q96ER3 474 aa27.34■■□□□ 1.97
LSM6-202ENST00000502781 FBXL18Q96ME1 805 aa27.34■■□□□ 1.97
LSM6-202ENST00000502781 TSPAN18Q96SJ8 248 aa27.34■■□□□ 1.97
LSM6-202ENST00000502781 FAN1Q9Y2M0 1017 aa27.34■■□□□ 1.97
LSM6-202ENST00000502781 MTCH2Q9Y6C9 303 aa27.34■■□□□ 1.97
LSM6-202ENST00000502781 TRANK1O15050 2925 aa27.33■■□□□ 1.97
LSM6-202ENST00000502781 CITO14578 2027 aa27.33■■□□□ 1.97
LSM6-202ENST00000502781 LACTBL1A8MY62 500 aa27.33■■□□□ 1.97
LSM6-202ENST00000502781 PDXKO00764 312 aa27.33■■□□□ 1.97
LSM6-202ENST00000502781 EXTL3O43909 919 aa27.33■■□□□ 1.97
LSM6-202ENST00000502781 DNAJB1P25685 340 aa27.33■■□□□ 1.97
LSM6-202ENST00000502781 ZBTB6Q15916 424 aa27.33■■□□□ 1.97
LSM6-202ENST00000502781 CD302Q8IX05 232 aa27.33■■□□□ 1.97
LSM6-202ENST00000502781 GOLGA5Q8TBA6 731 aa27.33■■□□□ 1.97
LSM6-202ENST00000502781 MRPL38Q96DV4 380 aaKnown RBP27.33■■□□□ 1.97
LSM6-202ENST00000502781 GTPBP4Q9BZE4 634 aaKnown RBP27.33■■□□□ 1.97
LSM6-202ENST00000502781 ASB7Q9H672 318 aa27.33■■□□□ 1.97
LSM6-202ENST00000502781 SLC38A7Q9NVC3 462 aa27.33■■□□□ 1.97
LSM6-202ENST00000502781 MARCH5Q9NX47 278 aa27.33■■□□□ 1.97
LSM6-202ENST00000502781 HSPBP1Q9NZL4 362 aa27.33■■□□□ 1.97
LSM6-202ENST00000502781 TDRD15B5MCY1 1934 aaKnown RBP27.32■■□□□ 1.96
LSM6-202ENST00000502781 PRRC2BQ5JSZ5 2229 aaKnown RBP27.32■■□□□ 1.96
LSM6-202ENST00000502781 FOSL2P15408 326 aa27.32■■□□□ 1.96
LSM6-202ENST00000502781 PPP2R3AQ06190 1150 aa27.32■■□□□ 1.96
LSM6-202ENST00000502781 SOX4Q06945 474 aaPredicted RBP27.32■■□□□ 1.96
LSM6-202ENST00000502781 GPD1LQ8N335 351 aa27.32■■□□□ 1.96
LSM6-202ENST00000502781 POF1BQ8WVV4 589 aa27.32■■□□□ 1.96
LSM6-202ENST00000502781 FAM213AQ9BRX8 229 aa27.32■■□□□ 1.96
LSM6-202ENST00000502781 PCIF1Q9H4Z3 704 aa27.32■■□□□ 1.96
LSM6-202ENST00000502781 TRIP11Q15643 1979 aa27.32■■□□□ 1.96
LSM6-202ENST00000502781 EFEMP2O95967 443 aa27.31■■□□□ 1.96
LSM6-202ENST00000502781 OR1G1P47890 313 aa27.31■■□□□ 1.96
LSM6-202ENST00000502781 KRT17Q04695 432 aa27.31■■□□□ 1.96
LSM6-202ENST00000502781 BRSK2Q8IWQ3 736 aa27.31■■□□□ 1.96
LSM6-202ENST00000502781 SMYD4Q8IYR2 804 aaPredicted RBP27.31■■□□□ 1.96
LSM6-202ENST00000502781 TMEM169Q96HH4 297 aa27.31■■□□□ 1.96
LSM6-202ENST00000502781 PAAF1Q9BRP4 392 aa27.31■■□□□ 1.96
LSM6-202ENST00000502781 CLSTN2Q9H4D0 955 aa27.31■■□□□ 1.96
LSM6-202ENST00000502781 MAN1B1Q9UKM7 699 aa27.31■■□□□ 1.96
LSM6-202ENST00000502781 TRAF3IP3Q9Y228 551 aa27.31■■□□□ 1.96
LSM6-202ENST00000502781 STXBP5LQ9Y2K9 1186 aa27.31■■□□□ 1.96
LSM6-202ENST00000502781 PRG3Q9Y2Y8 225 aaPredicted RBP27.31■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms