RNA–Protein interactions for RNA: ENST00000498739.1

PRKCB-210, Transcript of protein kinase C beta, humanhuman

TSL 4

Gene PRKCB, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-210ENST00000498739 DNAJB1P25685 340 aa18.28■□□□□ 0.52
PRKCB-210ENST00000498739 ADSSP30520 456 aa18.28■□□□□ 0.52
PRKCB-210ENST00000498739 PLCB3Q01970 1234 aa18.28■□□□□ 0.52
PRKCB-210ENST00000498739 UBE3AQ05086 875 aa18.28■□□□□ 0.52
PRKCB-210ENST00000498739 STK4Q13043 487 aa18.28■□□□□ 0.52
PRKCB-210ENST00000498739 PSMD2Q13200 908 aa18.28■□□□□ 0.52
PRKCB-210ENST00000498739 PNOCQ13519 176 aa18.28■□□□□ 0.52
PRKCB-210ENST00000498739 CCDC85BQ15834 202 aaPredicted RBP18.28■□□□□ 0.52
PRKCB-210ENST00000498739 TMEM173Q86WV6 379 aaPredicted RBP18.28■□□□□ 0.52
PRKCB-210ENST00000498739 SCFD1Q8WVM8 642 aa18.28■□□□□ 0.52
PRKCB-210ENST00000498739 AGO2Q9UKV8 859 aaKnown RBP18.28■□□□□ 0.52
PRKCB-210ENST00000498739 SMIM28A0A1B0GU29 152 aa18.27■□□□□ 0.52
PRKCB-210ENST00000498739 CASTOR2A6NHX0 329 aa18.27■□□□□ 0.52
PRKCB-210ENST00000498739 MEFVO15553 781 aaPredicted RBP18.27■□□□□ 0.52
PRKCB-210ENST00000498739 FAM189A1O60320 539 aa18.27■□□□□ 0.52
PRKCB-210ENST00000498739 HOXD13P35453 343 aa18.27■□□□□ 0.52
PRKCB-210ENST00000498739 ACOT2P49753 483 aa18.27■□□□□ 0.52
PRKCB-210ENST00000498739 PPP2R3AQ06190 1150 aa18.27■□□□□ 0.52
PRKCB-210ENST00000498739 TUSC3Q13454 348 aa18.27■□□□□ 0.52
PRKCB-210ENST00000498739 SLC10A6Q3KNW5 377 aa18.27■□□□□ 0.52
PRKCB-210ENST00000498739 XKR4Q5GH76 650 aa18.27■□□□□ 0.52
PRKCB-210ENST00000498739 ARMCX5Q6P1M9 558 aa18.27■□□□□ 0.52
PRKCB-210ENST00000498739 ALKAL1Q6UXT8 129 aa18.27■□□□□ 0.52
PRKCB-210ENST00000498739 CLEC17AQ6ZS10 378 aa18.27■□□□□ 0.52
PRKCB-210ENST00000498739 KIAA0895Q8NCT3 520 aa18.27■□□□□ 0.52
PRKCB-210ENST00000498739 BCL7CQ8WUZ0 217 aaPredicted RBP18.27■□□□□ 0.52
PRKCB-210ENST00000498739 IGSF21Q96ID5 467 aa18.27■□□□□ 0.52
PRKCB-210ENST00000498739 PPP1R10Q96QC0 940 aaKnown RBP18.27■□□□□ 0.52
PRKCB-210ENST00000498739 RPF1Q9H9Y2 349 aaKnown RBP18.27■□□□□ 0.52
PRKCB-210ENST00000498739 CNTN3Q9P232 1028 aa18.27■□□□□ 0.52
PRKCB-210ENST00000498739 CACNG4Q9UBN1 327 aa18.27■□□□□ 0.52
PRKCB-210ENST00000498739 PUF60Q9UHX1 559 aaKnown RBP18.27■□□□□ 0.52
PRKCB-210ENST00000498739 HOOK1Q9UJC3 728 aaKnown RBP18.27■□□□□ 0.52
PRKCB-210ENST00000498739 CPSF3Q9UKF6 684 aaKnown RBP18.27■□□□□ 0.52
PRKCB-210ENST00000498739 CHD7Q9P2D1 2997 aa18.27■□□□□ 0.51
PRKCB-210ENST00000498739 RHOBTB3O94955 611 aa18.26■□□□□ 0.51
PRKCB-210ENST00000498739 GARTP22102 1010 aa18.26■□□□□ 0.51
PRKCB-210ENST00000498739 CAMK1Q14012 370 aa18.26■□□□□ 0.51
PRKCB-210ENST00000498739 NAB2Q15742 525 aa18.26■□□□□ 0.51
PRKCB-210ENST00000498739 ENOX2Q16206 610 aaKnown RBP18.26■□□□□ 0.51
PRKCB-210ENST00000498739 BMT2Q1RMZ1 405 aa18.26■□□□□ 0.51
PRKCB-210ENST00000498739 MICAL1Q8TDZ2 1067 aa18.26■□□□□ 0.51
PRKCB-210ENST00000498739 NOC3LQ8WTT2 800 aaKnown RBP18.26■□□□□ 0.51
PRKCB-210ENST00000498739 RABGGTAQ92696 567 aa18.26■□□□□ 0.51
PRKCB-210ENST00000498739 FAM212AQ96EL1 285 aa18.26■□□□□ 0.51
PRKCB-210ENST00000498739 SAAL1Q96ER3 474 aa18.26■□□□□ 0.51
PRKCB-210ENST00000498739 ZMAT2Q96NC0 199 aaKnown RBP18.26■□□□□ 0.51
PRKCB-210ENST00000498739 GBP4Q96PP9 640 aa18.26■□□□□ 0.51
PRKCB-210ENST00000498739 CBWD1Q9BRT8 395 aa18.26■□□□□ 0.51
PRKCB-210ENST00000498739 PCIF1Q9H4Z3 704 aa18.26■□□□□ 0.51
PRKCB-210ENST00000498739 TLR9Q9NR96 1032 aa18.26■□□□□ 0.51
PRKCB-210ENST00000498739 MARCH5Q9NX47 278 aa18.26■□□□□ 0.51
PRKCB-210ENST00000498739 LZTS1Q9Y250 596 aa18.26■□□□□ 0.51
PRKCB-210ENST00000498739 PLXNA4Q9HCM2 1894 aa18.26■□□□□ 0.51
PRKCB-210ENST00000498739 TDRD15B5MCY1 1934 aaKnown RBP18.25■□□□□ 0.51
PRKCB-210ENST00000498739 CDH23Q9H251 3354 aa18.25■□□□□ 0.51
PRKCB-210ENST00000498739 KCNE1P15382 129 aa18.25■□□□□ 0.51
PRKCB-210ENST00000498739 IRS1P35568 1242 aa18.25■□□□□ 0.51
PRKCB-210ENST00000498739 ERVFC1P60507 584 aa18.25■□□□□ 0.51
PRKCB-210ENST00000498739 SPAG1Q07617 926 aa18.25■□□□□ 0.51
PRKCB-210ENST00000498739 KCNB1Q14721 858 aa18.25■□□□□ 0.51
PRKCB-210ENST00000498739 TIGD5Q53EQ6 642 aa18.25■□□□□ 0.51
PRKCB-210ENST00000498739 ERCC4Q92889 916 aaPredicted RBP18.25■□□□□ 0.51
PRKCB-210ENST00000498739 PAAF1Q9BRP4 392 aa18.25■□□□□ 0.51
PRKCB-210ENST00000498739 FAM213AQ9BRX8 229 aa18.25■□□□□ 0.51
PRKCB-210ENST00000498739 COLEC11Q9BWP8 271 aa18.25■□□□□ 0.51
PRKCB-210ENST00000498739 PLEKHA5Q9HAU0 1116 aa18.25■□□□□ 0.51
PRKCB-210ENST00000498739 GOLGA2P5Q9HBQ8 144 aa18.25■□□□□ 0.51
PRKCB-210ENST00000498739 ENTPD7Q9NQZ7 604 aa18.25■□□□□ 0.51
PRKCB-210ENST00000498739 SLC38A7Q9NVC3 462 aa18.25■□□□□ 0.51
PRKCB-210ENST00000498739 TTC26A0AVF1 554 aa18.24■□□□□ 0.51
PRKCB-210ENST00000498739 GOLGA8IPA6NC78 632 aa18.24■□□□□ 0.51
PRKCB-210ENST00000498739 GOLGA8JA6NMD2 632 aa18.24■□□□□ 0.51
PRKCB-210ENST00000498739 LACTBL1A8MY62 500 aa18.24■□□□□ 0.51
PRKCB-210ENST00000498739 F8W810 466 aa18.24■□□□□ 0.51
PRKCB-210ENST00000498739 TULP1O00294 542 aaPredicted RBP18.24■□□□□ 0.51
PRKCB-210ENST00000498739 TGFB1I1O43294 461 aa18.24■□□□□ 0.51
PRKCB-210ENST00000498739 SMC2O95347 1197 aa18.24■□□□□ 0.51
PRKCB-210ENST00000498739 LDHAP00338 332 aaKnown RBP18.24■□□□□ 0.51
PRKCB-210ENST00000498739 HSP90AA2PQ14568 343 aaPredicted RBP18.24■□□□□ 0.51
PRKCB-210ENST00000498739 KNOP1Q1ED39 458 aaKnown RBP18.24■□□□□ 0.51
PRKCB-210ENST00000498739 HS2ST1Q7LGA3 356 aa18.24■□□□□ 0.51
PRKCB-210ENST00000498739 DDX53Q86TM3 631 aaKnown RBP18.24■□□□□ 0.51
PRKCB-210ENST00000498739 ZSWIM2Q8NEG5 633 aa18.24■□□□□ 0.51
PRKCB-210ENST00000498739 SMARCE1Q969G3 411 aa18.24■□□□□ 0.51
PRKCB-210ENST00000498739 KIF12Q96FN5 646 aa18.24■□□□□ 0.51
PRKCB-210ENST00000498739 TCF25Q9BQ70 676 aa18.24■□□□□ 0.51
PRKCB-210ENST00000498739 NSUN3Q9H649 340 aaKnown RBP18.24■□□□□ 0.51
PRKCB-210ENST00000498739 AGPAT3Q9NRZ7 376 aa18.24■□□□□ 0.51
PRKCB-210ENST00000498739 RMND1Q9NWS8 449 aa18.24■□□□□ 0.51
PRKCB-210ENST00000498739 PCDHGC5Q9Y5F6 944 aa18.24■□□□□ 0.51
PRKCB-210ENST00000498739 CLIC2O15247 247 aa18.23■□□□□ 0.51
PRKCB-210ENST00000498739 SLC34A2O95436 690 aa18.23■□□□□ 0.51
PRKCB-210ENST00000498739 CA8P35219 290 aa18.23■□□□□ 0.51
PRKCB-210ENST00000498739 SOX4Q06945 474 aaPredicted RBP18.23■□□□□ 0.51
PRKCB-210ENST00000498739 PLPP4Q5VZY2 271 aa18.23■□□□□ 0.51
PRKCB-210ENST00000498739 CRELD2Q6UXH1 353 aaPredicted RBP18.23■□□□□ 0.51
PRKCB-210ENST00000498739 TMC7Q7Z402 723 aa18.23■□□□□ 0.51
PRKCB-210ENST00000498739 CD302Q8IX05 232 aa18.23■□□□□ 0.51
PRKCB-210ENST00000498739 ELOA2Q8IYF1 753 aaPredicted RBP18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms